BAC Information

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BAC

Clone NameB6Ng01-154O03
Chromosome13 (Build37)
Map Location 13,114,916 - 13,115,781
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2
Downstream geneLOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O03.bB6Ng01-154O03.g
ACCDH949808DH949809
length1,2781,090
definitionDH949808|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O03, 5' end.DH949809|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcaatgagttatccttatctaatgagaagctcatatggttttg
cttcccctttgagtttgtttttatagtggattatgttggtggatttccaa
ataatgaaccatccctgaacccctaggatgaagcttacttgatcatgaga
gatgattgttttgatgtgttcttgaattcagtttgaaggaattttattga
gtatttttaaatcgataatcataagggaaattggtctgaagttctctttc
tttgctgtgtctttgtgtgattttggtataagcataactatgacatcatc
gaatgaactgggtagtgttccctttgtttctattttgtgaaatactttaa
agataattgatactaggtcttcctcgaaagtctgatagaattctgatata
aaccaagctggtcctcggcttcttttggttggaagatttttaatgacttc
ctctatttctttaggggttatgggactgtttagatggcttatcttatctt
gaattaactttggtacctggtatctgtctagaaaattgtccactttatcc
agatattccagttttgttgagaatatgcttttgtagtagaatctgatgat
tttttaaaaaaaatttccttggttcctgttgttatgtctcccttttcact
tttgatttttgttaatttggatgctgtttctgtgccctcttgttattctg
gctaagggtttatctatcttgttgattttctcaaagaaccagctccttga
ttggctgattctttgtgtagttctttttatttatagttggttaatttcag
ccatcagtttgaatatttcctgctgtctattcctctttggtatatttgct
tctttttgttatagagctttcatgtgtgctgtcaagctcttgtgtatgct
ctctccagtttctttctggaggtactcagagctatgaattttcctcttgg
cactgctttcactgtgtcccataagtttgggtacattgtgcctcattttc
ataaattatcaatttcttaatgtctttatttttccttaacagtatcattg
agtagatattgtacaccttctaggtatatgtggctttcagtgtttttgtt
gttattgaagaacagctaagcccaagggaatcgataagaatccagggata
tatttccatcccactgtaacctgtgaggactattttgtgagatgtatata
atggtccattggaaaggtcacctagaggtgctcgtagacaaggatactcc
tctgatgttgagaatgaagaacgtacta
gaattccatatattgaatcatccctgcatacctggtatgaagcctacttg
atattggtgaatggttgttttgatgtgttcttgtatttggtttgtaagaa
ttttattattgattattattttattatcaattgatctgaagttctcttcc
tctgttgggtctttgtgtggtttatgtatgagcgtaatttgggctccata
gaatgaattgggtagtgttccttctgtttctattttgtggaacaattaag
agtatttgtattaggttttctttaaaggtctggtagaattctgcgctaca
accatcttgtcctgggcttttttgttgttgttgttgggagtctcttaatg
tttgcttctattctttaggggttgtggaatgttttatatggtttatctga
tcttgatttaactttagtacctggtatctgtctagtaaattgtccatttc
atccagattttccagttttgttgagtatgggcttttgtagtagaatcaga
tgattatttaaattttcttcatttccattgttatgtctcccttttcattt
ctgctttattaatttggatactgttttggtgctctctggttattctggct
ctgggtttatctatcttgttgatttttctcaaagaactactcctggtttt
gttgattctttgtaaagatatttttgtttctacttggttgatttcagccc
tgagtttgattatttcctgctgtctattcctcttgtgtgtataatgcatt
cattagacataaaaaattggaaaggtcaataattccaataaaacaatgtt
ggaagccatttattccccaattattatggcaatagatctagcgtcacaaa
tctggcagtgagcagttagtaagcaccatatatttcacactctgtatctg
tactagaagtgtaaagctcagtatctagtcatttttgcataagatgcacc
actgagattcctactaccttcttttaacatatttatgactcttatataaa
ttataatggaaatgccttgaaacgaataaatttgataatatttctcttcc
cttagaatttttgtctggaaagtcaatttttccttaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13114916_13115781
seq2: B6Ng01-154O03.g_308_1154

seq1  AATTAAGACTATTTGTATTAGGTCTTCTTTAAGGGTCTGGTAGAATTCTG  50
      |||||||| |||||||||||||| |||||||| |||||||||||||||||
seq2  AATTAAGAGTATTTGTATTAGGTTTTCTTTAAAGGTCTGGTAGAATTCTG  50

seq1  CACTACAACCATCTTGTCTTGGACTTTTTTGTTGTTGTTGCTGGGAGTCT  100
      | |||||||||||||||| ||| ||||||||||||||||| |||||||||
seq2  CGCTACAACCATCTTGTCCTGGGCTTTTTTGTTGTTGTTGTTGGGAGTCT  100

seq1  CTTAATGTCTGCTTCTATTCTTTAGGGGTTGTGGAATGTTTTATATGGTT  150
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGTTTGCTTCTATTCTTTAGGGGTTGTGGAATGTTTTATATGGTT  150

seq1  TATCTGATCTTGATTTAACTTTGGTACCTGGTATCTGTCTAGTAAATTGT  200
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TATCTGATCTTGATTTAACTTTAGTACCTGGTATCTGTCTAGTAAATTGT  200

seq1  CTATTTCATCCAGATTTTCCAGTTTTGTTGAGTATGGGCTTTTGTAGTAG  250
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCATCCAGATTTTCCAGTTTTGTTGAGTATGGGCTTTTGTAGTAG  250

seq1  AATCAGATAATTATTTAAATTTTCTTCATTTCCATTGTTATGTCTCCCTT  300
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGATGATTATTTAAATTTTCTTCATTTCCATTGTTATGTCTCCCTT  300

seq1  TTCATTTCTGCTATTATTAATTTAGATACTGTTTCGGTGCTCTCTGGTTA  350
      |||||||||||| |||||||||| |||||||||| |||||||||||||||
seq2  TTCATTTCTGCT-TTATTAATTTGGATACTGTTTTGGTGCTCTCTGGTTA  349

seq1  GTCTGGCTTTGGGTTTATCTATCTTGTTGATTTTTCTCAAAGAACCACTC  400
       ||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  TTCTGGCTCTGGGTTTATCTATCTTGTTGATTTTTCTCAAAGAACTACTC  399

seq1  CTGGTTTTGTTGATTCTTTGTAAAGATCTTTTTGTTTCTACTTGGTTGAT  450
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGGTTTTGTTGATTCTTTGTAAAGATATTTTTGTTTCTACTTGGTTGAT  449

seq1  TTCAGCCCTGAGTTTGATTATTTCCTGCTGTCTATTCCTCTTGGGTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCAGCCCTGAGTTTGATTATTTCCTGCTGTCTATTCCTCTTGTGTGTAT  499

seq1  AATGCATTCATTAGACATAAAAAATTGG-AAGGTCAATAATTCCAATAAA  549
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGCATTCATTAGACATAAAAAATTGGAAAGGTCAATAATTCCAATAAA  549

seq1  ACAATGTTGGAATGTCATTTATTCCCCAGTTATTATGGCAATAGATCTAG  599
      |||||||||||| | ||||||||||||| |||||||||||||||||||||
seq2  ACAATGTTGGAA-GCCATTTATTCCCCAATTATTATGGCAATAGATCTAG  598

seq1  CGTCACAAATCTGGCAGGTGAGCAGTTATTAAGCACCATATATCTCACAC  649
      |||||||||||||||| ||||||||||| |||||||||||||| ||||||
seq2  CGTCACAAATCTGGCA-GTGAGCAGTTAGTAAGCACCATATATTTCACAC  647

seq1  TCTGTATCTGTACTAGAAGGTGGAAAAAGCCTCAGTATCTAGTCATTTTA  699
      |||||||||||||||||| ||| |||    ||||||||||||||||||| 
seq2  TCTGTATCTGTACTAGAA-GTGTAAA---GCTCAGTATCTAGTCATTTT-  692

seq1  TGCATAGGAATGCACCACTGAGATTCACTACTACTCTC-TATAACATATT  748
      |||||| | ||||||||||||||||| |||||||  || | |||||||||
seq2  TGCATAAG-ATGCACCACTGAGATTC-CTACTACCTTCTTTTAACATATT  740

seq1  TATGACTC-TATATAAATTATAAAATGGAAACATGCATTGAAGAGGGAAT  797
      |||||||| ||||||||||||  |||||||  |||| |||||  |   | 
seq2  TATGACTCTTATATAAATTAT--AATGGAA--ATGCCTTGAAACG---AA  783

seq1  TAAATTTGATAATATTTTCCTCCCTTTAGTATTTTTGTCTGGGAAAAAGT  847
      |||||||||||||||||  || || |||| ||||||||||||   |||||
seq2  TAAATTTGATAATATTTCTCTTCCCTTAGAATTTTTGTCTGG---AAAGT  830

seq1  CAATGTTTTCTCTTAACAA  866
      |||| ||||| ||||||||
seq2  CAAT-TTTTC-CTTAACAA  847