BAC Information

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BAC

Clone NameB6Ng01-155D02
Chromosome13 (Build37)
Map Location 73,903,004 - 74,097,747
singlet/doubletdoublet
Overlap geneSlc12a7, Nkd2, EG666360, Trip13, Brd9
Upstream geneLOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36, Aytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19
Downstream geneZdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366, Zfp72, LOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155D02.bB6Ng01-155D02.g
ACCDH950042DH950043
length1,152893
definitionDH950042|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D02, 5' end.DH950043|Mus musculus domesticus DNA, BAC clone: B6Ng01-155D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,096,587 - 74,097,747)(73,903,004 - 73,903,896)
sequence
gaattcataagggtcgtgggcgacatccggctgctccccaacactaaggc
gagaaggacttcctgtaagtttgaaagaagatggcatttaagcataccaa
acgtaactgcaaagctcatgaaaccaacatctgtactgctatctaataag
accaatgtcctccccggcaccagacagaggtacattcacaccccaatctg
aatcagggatgtctacaatctccttgggctctactttgcatgatacacaa
ggtgatcataaaaactcttgtttttcttctggcagctgcaaccaggctag
gggaagtagttcctgaaggcagtggaggcgaggggaagcagctcctaaag
gcctggctcattctaggtagtaggcagacttggttatcttgagctgaggt
tccctcaaatatcagggactggaagaccacagagaaaagacagtcattac
tgaagaaactaggatgaaagaggcagtgtttgactcagtcacagactaag
taaatagtaaggtgttcacaggaatgccaagaggttggttgagcagagat
cttaggactggtgaggggctgtaatggatttgctgagtcccatgatgagc
caggacccatatggaagaggaggctctgctagatgtaaatgacttatgtc
agcatgtaaattttaaagtgcaaaagcaatcaagaggtgatagaaaagga
aaagcaaacaaaagagtctgtccaggtcactcaaagacaaatagggtaag
atttgtgatttgtgtcaagccagagttcacaaggggaaaaaaaaaactaa
cagaaagtcaaatgctatgttagtgagctgctggaaggcttaaagctaag
caacagttacagaagatgtaagtgatataactcaaaggaaaaaattaaac
ttgttgtagaggtgagtaatatctacagatttctctcaccaccaccacac
caccaacaacaaccacagagtttgctgtataccatttggccatccacagt
ctgcttgcctgcttgataatgaccctgtcagtaccatacacactaaagag
tgatgtagtgtaaatgaaatggtacttagggctcataatggaatatttgg
ctcctcagtcatggaaactgttgccaaaggactaggaagttgggccctgt
tg
gaattcaatctgtagctgaagatgaccttgaactcctgactggagcctct
agcaactgcttgtattacagtagtgtgttgccacacccacttttgttatg
ttttgttttgttttttaaatgaattgctggtcaggattgaacctgggctt
ggtactttgctaggcaaatgctctaccaactgagccacatcctgagtatg
tgtgttttaatgatcctttcacgctccaagctgaacttgagtaacttggc
tgggcttatatagaacttgcattttggtgctctgtatacttaatatttct
ataatgataattttggaaacttcagccgctgtaccatgacagggatgact
ttgttgtagtcacagtctgctggggtttgtcctgaactctttgctttttt
aaaaatttttagttattatttatttttgtttgttttcaatttttattatt
ttacttatttacattccagtcattggtctcccactccacctctcagtacc
ccctcccacagttccttatcccacttctctaacctcttgcctctgagagg
gtactcccctccactccccaggccattccctttcttggggcctcaagtct
cttgaagattaagggagagctctgctatatttgtgccaggggcctctgac
tggcctgtgtatgatcctggttggtggctcagtctctggggggtaagttg
agattgctggtcttcctatggggttactctctccttcagcgttttcaatc
tttcccccaatttaaccataagggtctccgacttcagttcaatgcttggg
tttaagtatctgcttctgtctcaatcagctgctgggagggcctcttgggg
gacagccatgccaggctcccgtctgtaagcacatcataacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_74096587_74097747
seq2: B6Ng01-155D02.b_46_1197 (reverse)

seq1  CAACAGGGCCACACTTCCTAGTCCTTTGCAAACAGTTCCACTGACTGAGG  50
      ||||||||||  ||||||||||||||||  ||||||| |  |||||||||
seq2  CAACAGGGCCCAACTTCCTAGTCCTTTGGCAACAGTTTCCATGACTGAGG  50

seq1  AG-CAAATATCCAATATATGAGCCTATAGGTACCATTCTCATTTACACTA  99
      || ||||||| | || ||||||||  || |||||||| ||||||||||||
seq2  AGCCAAATATTCCAT-TATGAGCC-CTAAGTACCATT-TCATTTACACTA  97

seq1  CATACACTC-TTAGTGTGTATGGTACTGACAGGGTCCATAATCAAGCAGC  148
      ||| ||||| ||||||||||||||||||||||||| ||| ||||||||| 
seq2  CAT-CACTCTTTAGTGTGTATGGTACTGACAGGGT-CATTATCAAGCAGG  145

seq1  CAAGCAGAACTGTGGATGGCAAAAT-GTATACAGCAAACTCTGTGGTTGT  197
      ||||||| |||||||||||| |||| ||||||||||||||||||||||||
seq2  CAAGCAG-ACTGTGGATGGCCAAATGGTATACAGCAAACTCTGTGGTTGT  194

seq1  TGTTGGTGGTGGTGGTGGTGGTGAGAAGATATCTGTAGATAATTACTCAC  247
      |||||||||| |||||||||||||| ||| |||||||||| |||||||||
seq2  TGTTGGTGGT-GTGGTGGTGGTGAG-AGAAATCTGTAGAT-ATTACTCAC  241

seq1  CTCTACAACAAGTTTAATTTTTTCCTTTGAAGTTATATCACTTACATCTT  297
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTACAACAAGTTTAATTTTTTCCTTTG-AGTTATATCACTTACATCTT  290

seq1  CTGTAAACTGTTGCTTAGCTTTAAAGCCTTCCAGCAGCTCACTAACATAG  347
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGT-AACTGTTGCTTAGCTTT-AAGCCTTCCAGCAGCTCACTAACATAG  338

seq1  CATTTGACTTTCTGTTAGTTTTTTTTTTCCCCTTGTGAACTCTGGCTTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGACTTTCTGTTAGTTTTTTTTTTCCCCTTGTGAACTCTGGCTTGA  388

seq1  CACAAATCACAAATCTTACCCTATTTGTCTTTGAGTGACCTGGACAGACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATCACAAATCTTACCCTATTTGTCTTTGAGTGACCTGGACAGACT  438

seq1  CTTTTGTTTGCTTTTCCTTTTCTATCACCTCTTGATTGCTTTTGCACTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTGCTTTTCCTTTTCTATCACCTCTTGATTGCTTTTGCACTTT  488

seq1  AAAATTTACATGCTGACATAAGTCATTTACATCTAGCAGAGCCTCCTCTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTACATGCTGACATAAGTCATTTACATCTAGCAGAGCCTCCTCTT  538

seq1  CCATATGGGTCCTGGCTCATCATGGGACTCAGCAAATCCATTACAGCCCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGGGTCCTGGCTCATCATGGGACTCAGCAAATCCATTACAGCCCC  588

seq1  TCACCAGTCCTAAGATCTCTGCTCAACCAACCTCTTGGCATTCCTGTGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGTCCTAAGATCTCTGCTCAACCAACCTCTTGGCATTCCTGTGAA  638

seq1  CACCTTACTATTTACTTAGTCTGTGACTGAGTCAAACACTGCCTCTTTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACTATTTACTTAGTCTGTGACTGAGTCAAACACTGCCTCTTTCA  688

seq1  TCCTAGTTTCTTCAGTAATGACTGTCTTTTCTCTGTGGTCTTCCAGTCCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTTCTTCAGTAATGACTGTCTTTTCTCTGTGGTCTTCCAGTCCC  738

seq1  TGATATTTGAGGGAACCTCAGCTCAAGATAACCAAGTCTGCCTACTACCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTTGAGGGAACCTCAGCTCAAGATAACCAAGTCTGCCTACTACCT  788

seq1  AGAATGAGCCAGGCCTTTAGGAGCTGCTTCCCCTCGCCTCCACTGCCTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGCCAGGCCTTTAGGAGCTGCTTCCCCTCGCCTCCACTGCCTTC  838

seq1  AGGAACTACTTCCCCTAGCCTGGTTGCAGCTGCCAGAAGAAAAACAAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTACTTCCCCTAGCCTGGTTGCAGCTGCCAGAAGAAAAACAAGAG  888

seq1  TTTTTATGATCACCTTGTGTATCATGCAAAGTAGAGCCCAAGGAGATTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGATCACCTTGTGTATCATGCAAAGTAGAGCCCAAGGAGATTGT  938

seq1  AGACATCCCTGATTCAGATTGGGGTGTGAATGTACCTCTGTCTGGTGCCG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCCCTGATTCAGATTGGGGTGTGAATGTACCTCTGTCTGGTGCCG  988

seq1  GGGAGGACATTGGTCTTATTAGATAGCAGTACAGATGTTGGTTTCATGAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGACATTGGTCTTATTAGATAGCAGTACAGATGTTGGTTTCATGAG  1038

seq1  CTTTGCAGTTACGTTTGGTATGCTTAAATGCCATCTTCTTTCAAACTTAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCAGTTACGTTTGGTATGCTTAAATGCCATCTTCTTTCAAACTTAC  1088

seq1  AGGAAGTCCTTCTCGCCTTAGTGTTGGGGAGCAGCCGGATGTCGCCCACG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTCCTTCTCGCCTTAGTGTTGGGGAGCAGCCGGATGTCGCCCACG  1138

seq1  ACCCTTATGAATTC  1161
      ||||||||||||||
seq2  ACCCTTATGAATTC  1152

seq1: chr13_73903004_73903896
seq2: B6Ng01-155D02.g_67_959

seq1  GAATTCAATCTGTAGCTGAAGATGACCTTGAACTCCTGACTGGAGCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTGTAGCTGAAGATGACCTTGAACTCCTGACTGGAGCCTCT  50

seq1  AGCAACTGCTTGTATTACAGTAGTGTGTTGCCACACCCACTTTTGTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTGCTTGTATTACAGTAGTGTGTTGCCACACCCACTTTTGTTATG  100

seq1  TTTTGTTTTGTTTTTTAAATGAATTGCTGGTCAGGATTGAACCTGGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTTTAAATGAATTGCTGGTCAGGATTGAACCTGGGCTT  150

seq1  GGTACTTTGCTAGGCAAATGCTCTACCAACTGAGCCACATCCTGAGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTTGCTAGGCAAATGCTCTACCAACTGAGCCACATCCTGAGTATG  200

seq1  TGTGTTTTAATGATCCTTTCACGCTCCAAGCTGAACTTGAGTAACTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTAATGATCCTTTCACGCTCCAAGCTGAACTTGAGTAACTTGGC  250

seq1  TGGGCTTATATAGAACTTGCATTTTGGTGCTCTGTATACTTAATATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTATATAGAACTTGCATTTTGGTGCTCTGTATACTTAATATTTCT  300

seq1  ATAATGATAATTTTGGAAACTTCAGCCGCTGTACCATGACAGGGATGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATAATTTTGGAAACTTCAGCCGCTGTACCATGACAGGGATGACT  350

seq1  TTGTTGTAGTCACAGTCTGCTGGGGTTTGTCCTGAACTCTTTGCTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTAGTCACAGTCTGCTGGGGTTTGTCCTGAACTCTTTGCTTTTTT  400

seq1  AAAAATTTTTAGTTATTATTTATTTTTGTTTGTTTTCAATTTTTATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTTTAGTTATTATTTATTTTTGTTTGTTTTCAATTTTTATTATT  450

seq1  TTACTTATTTACATTCCAGTCATTGGTCTCCCACTCCACCTCTCAGTACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTTACATTCCAGTCATTGGTCTCCCACTCCACCTCTCAGTACC  500

seq1  CCCTCCCACAGTTCCTTATCCCACTTCTCTAACCTCTTGCCTCTGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCACAGTTCCTTATCCCACTTCTCTAACCTCTTGCCTCTGAGAGG  550

seq1  GTACTCCCCTCCACTCCCCAGGCCATTCCCTTTCTTGGGGCCTCAAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCCCCTCCACTCCCCAGGCCATTCCCTTTCTTGGGGCCTCAAGTCT  600

seq1  CTTGAAGATTAAGGGAGAGCTCTGCTATATTTGTGCCAGGGGCCTCTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGATTAAGGGAGAGCTCTGCTATATTTGTGCCAGGGGCCTCTGAC  650

seq1  TGGCCTGTGTATGATCCTGGTTGGTGGCTCAGTCTCTGGGGGGTAAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTGTATGATCCTGGTTGGTGGCTCAGTCTCTGGGGGGTAAGTTG  700

seq1  AGATTGCTGGTCTTCCTATGGGGTTACTCTCTCCTTCAGCGTTTTCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTGGTCTTCCTATGGGGTTACTCTCTCCTTCAGCGTTTTCAATC  750

seq1  TTTCCCCCAATTCAACCATAAGGGTCTCCGACTTCAGTTCAATGCTTGGG  800
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCAATTTAACCATAAGGGTCTCCGACTTCAGTTCAATGCTTGGG  800

seq1  TTTAAGTATCTGCTTCTGTCTCAGTCAGCTGCTGGTAGGGCCTCTTGGGG  850
      ||||||||||||||||||||||| ||||||||||| ||||||||||||||
seq2  TTTAAGTATCTGCTTCTGTCTCAATCAGCTGCTGGGAGGGCCTCTTGGGG  850

seq1  GACAGCCATGCCAGGCTCCCGTCTGTAAGCACATCATAACATC  893
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCATGCCAGGCTCCCGTCTGTAAGCACATCATAACATC  893