BAC Information

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BAC

Clone NameB6Ng01-156D13
Chromosome13 (Build37)
Map Location 33,523,541 - 33,524,676
singlet/doubletsinglet
Overlap genenone
Upstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724
Downstream geneSerpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156D13.bB6Ng01-156D13.g
ACCDH950784DH950785
length1,2461,144
definitionDH950784|Mus musculus domesticus DNA, BAC clone: B6Ng01-156D13, 5' end.DH950785|Mus musculus domesticus DNA, BAC clone: B6Ng01-156D13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatcttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgactgtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaattttccccctgggcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccattttgatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgt
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgaaaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgttgattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagattttatcata
cagatctttcacttccttagttagattcacctccgagatattttatatta
tttgcgatattgagaaggtgttgtttccctaatttctttctcagcctgtt
atttcttgtgacagaaggccatgacttggtttgagttaatttatatccag
ctacttcaccgagcgtgttacacgggttaaggagtccctggcttaattta
ggtcacttatattaccatactatcacctgcaaaaggaatttgactccctc
tttccattgataccctgaattcctgtgtgcgcatggcctggccaaacttc
acagtatcaggtggaaagagttaagtgatcagagaatggtgcgatc
gaattcatttaatgtgccacaatctatgaatcccatataagagtcatttt
caaagactttctctaaagtgaacaaattaataatatcaaggagggtaaac
aggaacacacatgtaatgtcagattccagagtcaaagataagtatatctc
tgtgagtgccaagccagtctggtttatatattatgttcaaaagagcttgg
actacatagtgagtctgtcaggaacactcaagaatctggtcaattatcag
atagggtcagaatctgtctctggaagttctgaatccagacttggcaacct
gtcttttaaaaagatattaaaagagacagattcatagtgaaaagaggaaa
aaagcagcattattcaatgtggtcccattggagggaggaactgagctatc
cagtgaggtccgaagcctttcactgggattcctgacctgagatcaaggca
aacaaacagagttgacagagctaagctgccaaggtgtcatcctgtctatc
attattccatccttgtatgaccccactctgtcctgcatgggacttccaag
gcagactttcctgcagggtctacttgggttctgaagggaagtgtgtctct
ccgttttttgctggtgtgccaaatagcagaaactgggattgtagtacaat
cctttgctttactgacaactcttctattaacagaaaccaggagaggaaca
gaattatgttcttggattagatacattgaacattgtgtgcaaggctcttt
ttaaaaaatttttattaggtatcttccctcatttacatttccaatgctat
cccaaaagtcccccatacccaccctcccactccattatctgcccactccc
catttttggccctagcgttcccctgtactggggcatataaagtttgcagt
ccaatgggccttctctttcttgtgatgtcgactaggccatctttttgatt
catatgcagctaaagacacagcttctggggtactggttagttcatatgtt
gttccacctacagtggttgcagttccctttagcttccttgtgtactttct
cctagctcctccattgggggctctttgattcatacatagctgactgtgga
ggcatcccactttctgggtttgctaggacaccggcatatatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33523541_33524676
seq2: B6Ng01-156D13.g_68_1211 (reverse)

seq1  GAGA-ATATGCCGGTG-CCTAGCAAACACAG-AAGT-GGATGC--TCACA  44
      |||| ||||||||||| |||||||||| ||| |||| ||||||   ||||
seq2  GAGATATATGCCGGTGTCCTAGCAAACCCAGAAAGTGGGATGCCTCCACA  50

seq1  GTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAGGAGCTA-GAGAAA  93
      |||||||| || ||| |||| || ||||||||||||||||||| ||||||
seq2  GTCAGCTA-TGTATGAATCAAAGAGCCCCCAATGGAGGAGCTAGGAGAAA  99

seq1  GTACACAAGG-AGCTAAAGGGAACTGCAA-CACTGTAGGTGGAACAACAA  141
      |||||||||| |||||||||||||||||| |||||||||||||||||| |
seq2  GTACACAAGGAAGCTAAAGGGAACTGCAACCACTGTAGGTGGAACAAC-A  148

seq1  TATGAACTAACCAGTACCCCGGAGCTTGTGTCTTTAGCTGCATATGTATC  191
      |||||||||||||||||||| ||   |||||||||||||||||||| |||
seq2  TATGAACTAACCAGTACCCCAGAAGCTGTGTCTTTAGCTGCATATGAATC  198

seq1  -AAAAGATGGCCTAGTCGACCATCACAGGAAAGAG-AGGCCCATTGGACT  239
       |||||||||||||||||| ||||||| ||||||| ||||||||||||| 
seq2  AAAAAGATGGCCTAGTCGA-CATCACAAGAAAGAGAAGGCCCATTGGAC-  246

seq1  TGCAAACTTTATATGCCCCAGTACAGGGGAACGCTAGGGCCAAAAATGGG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTTTATATGCCCCAGTACAGGGGAACGCTAGGGCCAAAAATGGG  296

seq1  GAGTGGGCAGATAATGGAGTGGGAGGGTGGGTATGGGGGACTTTTGGGAT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGCAGATAATGGAGTGGGAGGGTGGGTATGGGGGACTTTTGGGAT  346

seq1  AGCATTGGAAATGTAAATGA-GGAAGATACCTAATAAAAATTTTTTAAAA  388
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGCATTGGAAATGTAAATGAGGGAAGATACCTAATAAAAATTTTTTAAAA  396

seq1  AGAGCCTTGCACACAATGTTCAATGTATCTAATCCAAGAACATAATTCTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTTGCACACAATGTTCAATGTATCTAATCCAAGAACATAATTCTG  446

seq1  TTCCTCTCCTGGTTTCTGTTAATAGAAGAGTTGTCAGTAAAGCAAAGGAT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCTGGTTTCTGTTAATAGAAGAGTTGTCAGTAAAGCAAAGGAT  496

seq1  TGTACTACAATCCCAGTTTCTGCTATTTGGCACACCAGCAAAAAACGGAG  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTACAATCCCAGTTTCTGCTATTTGGCACACCAGCAAAAAACGGAG  546

seq1  AGACACACTTCCCTTCAGAACCCAAGTAGACCCTGCAGGAAAGTCTGCCT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACTTCCCTTCAGAACCCAAGTAGACCCTGCAGGAAAGTCTGCCT  596

seq1  TGGAAGTCCCATGCAGGACAGAGTGGGGTCATACAAGGATGGAATAATGA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTCCCATGCAGGACAGAGTGGGGTCATACAAGGATGGAATAATGA  646

seq1  TAGACAGGATGACACCTTGGCAGCTTAGCTCTGTCAACTCTGTTTGTTTG  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGGATGACACCTTGGCAGCTTAGCTCTGTCAACTCTGTTTGTTTG  696

seq1  CCTTGATCTCAGGTCAGGAATCCCAGTGAAAGGCTTCGGACCTCACTGGA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATCTCAGGTCAGGAATCCCAGTGAAAGGCTTCGGACCTCACTGGA  746

seq1  TAGCTCAGTTCCTCCCTCCAATGGGACCACATTGAATAATGCTGCTTTTT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCAGTTCCTCCCTCCAATGGGACCACATTGAATAATGCTGCTTTTT  796

seq1  TCCTCTTTTCACTATGAATCTGTCTCTTTTAATATCTTTTTAAAAGACAG  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTCACTATGAATCTGTCTCTTTTAATATCTTTTTAAAAGACAG  846

seq1  GTTGCCAAGTCTGGATTCAGAACTTCCAGAGACAGATTCTGACCCTATCT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAGTCTGGATTCAGAACTTCCAGAGACAGATTCTGACCCTATCT  896

seq1  GATAATTGACCAGATTCTTGAGTGTTCCTGACAGACTCACTATGTAGTCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGACCAGATTCTTGAGTGTTCCTGACAGACTCACTATGTAGTCC  946

seq1  AAGCTCTTTTGAACATAATATATAAACCAGACTGGCTTGGCACTCACAGA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTTTGAACATAATATATAAACCAGACTGGCTTGGCACTCACAGA  996

seq1  GATATACTTATCTTTGACTCTGGAATCTGACATTACATGTGTGTTCCTGT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTTATCTTTGACTCTGGAATCTGACATTACATGTGTGTTCCTGT  1046

seq1  TTACCCTCCTTGATATTATTAATTTGTTCACTTTAGAGAAAGTCTTTGAA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTCCTTGATATTATTAATTTGTTCACTTTAGAGAAAGTCTTTGAA  1096

seq1  AATGACTCTTATATGGGATTCATAGATTGTGGCACATTAAATGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCTTATATGGGATTCATAGATTGTGGCACATTAAATGAATTC  1144