BAC Information

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BAC

Clone NameB6Ng01-157O13
Chromosome13 (Build37)
Map Location 117,298,351 - 117,299,542
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC547402, LOC100041045, EG623174, Isl1, EG668276, Gm280
Downstream geneLOC100041169, Parp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157O13.bB6Ng01-157O13.g
ACCDH952011DH952012
length1,156795
definitionDH952011|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O13, 5' end.DH952012|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactaccctcatatcttatctgagtcacctccatttgtgactat
tttaaccctgatatttaaggaggctagccaggacagtgacaaacagggta
ttgcccagatacctcttagtacctgtcagcattcccagattgaatttccc
atcctagagtttccacatttgctgggaaatgcctgcatgacatcttccag
tcactgtgaagctagcccaccccggtgtagttttcaaacaactggtttca
atcctgcctgctcagtgtagcctgcagaatgaggtcatacctttaagcct
caaagcttataatccagcagttacataaaaatgtcctcattctctgcagc
ccaattttattatctttacaagagggggtacttgtcattttgcctattca
atttttttctactcacatcaggtccttatggaaaggtccacccccttcac
taaattcagatataagttaagtctctgtcatatacacccacatacaaacc
ctctggaacctagtatagatgatgctaccatgaagacagcctgtgacttt
gggcaagttacttacttaatttctttctgtcttaggttccttctctacaa
acatgatgataaaacagtacctaccatgttgcctgtctatgcagattaaa
gacgccagtctatgaagaatgctcagaactaggccaggccctttgaaatt
gccaacagtgtgctgtgtgtgtcccagtacagctgttaagaaccttaaag
ttgctctgtttctgccccgcatgaaggcatgcctggtaactttctccatt
caggtgtctaacttactctaatttccttccaaagggaaagaaatcatcat
ccgaagtcagtagagtcagccagaaactctaaatggcttgctcatttcac
acactgtaggccttttctctcccagagtatttattagaccctagagagca
tactcggactgtatgtaccatcatctagacacaatagtgtgctttgtatg
cagaatacaagtttcggtgccggtaagacactacatgataataacttccc
tggcgttttatgctctacccagaatttccttttaggggaattcagtatga
accagatggcctagtccactgcttacaccaactactttccagggagactg
ctgcaa

gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccatcttccaccagtcagaatggctaagttcaaacattcaggtgacaga
agatgctggcgaggatgtggagacagaggaacactcctccattgtttgtg
ggattgcaagcttgtacaaccattctggaaatcagtctggtagttcctca
gaaaatttgcaaaacacatgaaactcaagaagaatgaagaccaaagtgtg
gacactttgccccttctaagaattgggaacaaaacacccatggaaggagt
tacagagacaaagtttgaagctaagaccaaaggatggaccatctagaatc
catcccataatcagcctccaaatgctgacaccattgcatacactagcaag
attttgctgaaaggacccagatatagctgacttttgtgagtctaggccgg
ggcctagcaaacacataattggatgctcacagtcagctattggatggatc
acagggcccccaatggaggagctagagaaagtacccaaggagctaaaggg
atctgcaaccctataggtggaacaacattattaactcaccagtaccccgg
agctcttgactctagctgcatatgtatcaaaagacagcctagtcagccat
cactggaaagagaggcccattggacttgcaaactttatatgccccagtac
aggggaacgccagggccaaaatgtgggagtgggtgggtaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117298351_117299542
seq2: B6Ng01-157O13.b_46_1201 (reverse)

seq1  TTGCAGCAGCTTCCTCCCTGGGAAAGTGAATGTTTGGTGGTAAGCTAGTT  50
      |||||||||    |||||| ||||||    |  ||||| |||||| || |
seq2  TTGCAGCAG---TCTCCCT-GGAAAG----TAGTTGGT-GTAAGC-AG-T  39

seq1  GGACTTAGGGCATCCTGGTGTTCATACATCTGAATTCCACCATAAAGGAA  100
      |||| |||| ||| |||  |||||||   ||||||||| ||  |||||||
seq2  GGAC-TAGGCCAT-CTG--GTTCATA---CTGAATTCC-CCTAAAAGGAA  81

seq1  AATCTGTGGTAGAGCCATAAAGACGCCAGTGATGTTATTACTCATGTAGT  150
      | |||| ||||||| |||||| ||||||| || ||||||| |||||||||
seq2  ATTCTG-GGTAGAG-CATAAA-ACGCCAGGGAAGTTATTA-TCATGTAGT  127

seq1  TGGTCTTACCGGCACCGAAACTTGTATTTCTGCATACAAAGCACCACTAT  200
        |||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  --GTCTTACCGGCACCGAAACTTGTA-TTCTGCATACAAAGCA-CACTAT  173

seq1  TGGTGTTCTAGATGATGGTGACATTAACAGTCCGAGGTTATTGCTCTCTA  250
      | ||| ||||||||||||| ||||  ||||||||||  || |||||||||
seq2  T-GTG-TCTAGATGATGGT-ACAT--ACAGTCCGAG--TA-TGCTCTCTA  215

seq1  GGGTCTAATAAATACTCTGGGGGAGAAAAGGCCTACAGTGTGTGAAATGA  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGTCTAATAAATACTCTGGGAGAGAAAAGGCCTACAGTGTGTGAAATGA  265

seq1  GCAAGCCATTTAGGGTTTTCTGGCTGACTCTACTGACTTCGGATGATGAT  350
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  GCAAGCCATTTAGAG-TTTCTGGCTGACTCTACTGACTTCGGATGATGAT  314

seq1  TTCTTTCCCTTTGGAAGGAAATTAGAGTAAGTTAGACACCTGAATGGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCCTTTGGAAGGAAATTAGAGTAAGTTAGACACCTGAATGGAGA  364

seq1  AAGTTACCAGGCATGCCTTCATGCGGGGCAGAAACAGAGCAACTTTAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACCAGGCATGCCTTCATGCGGGGCAGAAACAGAGCAACTTTAAGG  414

seq1  TTCTTAACAGCTGTACTGGGACACACACAGCACACTGTTGGCAATTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAACAGCTGTACTGGGACACACACAGCACACTGTTGGCAATTTCAA  464

seq1  AGGGCCTGGCCTAGTTCTGAGCATTCTTCATAGACTGGCGTCTTTAATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTGGCCTAGTTCTGAGCATTCTTCATAGACTGGCGTCTTTAATCT  514

seq1  GCATAGACAGGCAACATGGTAGGTACTGTTTTATCATCATGTTTGTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGACAGGCAACATGGTAGGTACTGTTTTATCATCATGTTTGTAGAG  564

seq1  AAGGAACCTAAGACAGAAAGAAATTAAGTAAGTAACTTGCCCAAAGTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACCTAAGACAGAAAGAAATTAAGTAAGTAACTTGCCCAAAGTCAC  614

seq1  AGGCTGTCTTCATGGTAGCATCATCTATACTAGGTTCCAGAGGGTTTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTCTTCATGGTAGCATCATCTATACTAGGTTCCAGAGGGTTTGTA  664

seq1  TGTGGGTGTATATGACAGAGACTTAACTTATATCTGAATTTAGTGAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGTATATGACAGAGACTTAACTTATATCTGAATTTAGTGAAGGG  714

seq1  GGTGGACCTTTCCATAAGGACCTGATGTGAGTAGAAAAAAATTGAATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACCTTTCCATAAGGACCTGATGTGAGTAGAAAAAAATTGAATAGG  764

seq1  CAAAATGACAAGTACCCCCTCTTGTAAAGATAATAAAATTGGGCTGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGACAAGTACCCCCTCTTGTAAAGATAATAAAATTGGGCTGCAGA  814

seq1  GAATGAGGACATTTTTATGTAACTGCTGGATTATAAGCTTTGAGGCTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGACATTTTTATGTAACTGCTGGATTATAAGCTTTGAGGCTTAA  864

seq1  AGGTATGACCTCATTCTGCAGGCTACACTGAGCAGGCAGGATTGAAACCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATGACCTCATTCTGCAGGCTACACTGAGCAGGCAGGATTGAAACCA  914

seq1  GTTGTTTGAAAACTACACCGGGGTGGGCTAGCTTCACAGTGACTGGAAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGAAAACTACACCGGGGTGGGCTAGCTTCACAGTGACTGGAAGA  964

seq1  TGTCATGCAGGCATTTCCCAGCAAATGTGGAAACTCTAGGATGGGAAATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCAGGCATTTCCCAGCAAATGTGGAAACTCTAGGATGGGAAATT  1014

seq1  CAATCTGGGAATGCTGACAGGTACTAAGAGGTATCTGGGCAATACCCTGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGGGAATGCTGACAGGTACTAAGAGGTATCTGGGCAATACCCTGT  1064

seq1  TTGTCACTGTCCTGGCTAGCCTCCTTAAATATCAGGGTTAAAATAGTCAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTGTCCTGGCTAGCCTCCTTAAATATCAGGGTTAAAATAGTCAC  1114

seq1  AAATGGAGGTGACTCAGATAAGATATGAGGGTAGTGGAATTC  1192
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGGTGACTCAGATAAGATATGAGGGTAGTGGAATTC  1156


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