BAC Information

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BAC

Clone NameB6Ng01-157O15
Chromosome13 (Build37)13 (Build37)
Map Location 66,152,816 - 66,153,65365,701,551 - 65,702,641
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746
Downstream geneLOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157O15.bB6Ng01-157O15.g
ACCDH952015DH952016
length1,1051,059
definitionDH952015|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O15, 5' end.DH952016|Mus musculus domesticus DNA, BAC clone: B6Ng01-157O15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,152,816 - 66,153,653)(65,701,551 - 65,702,641)
sequence
gaattccttgatccatttagacttgagctttgtacaaggagacaagaatg
aatcaattcgcacccttctacatgataactgccagttgtgcctgcaccat
ttgttgaaaatgctgtctttttttccactggatggttttagctcccttgt
caaagatctagtgaccttaggtgtgtgagttcatttctgggtctccaatt
ctattccattgttctagctgtttgtcactgtactagtacctagcagtttt
tatcacaattgctctgtagtacagcttgaggtcaggcatggtgatcccag
cagaggttcttttatcattgagaatagcttttgctatcctaggtcttctt
gtgattcgagatgaatttgcaaattgccctttctaattagatgaagaatt
gagttgtgattttgatggggattgcattgaatctgtagattgcttttggc
aagatagccatttttactatattgatcttgccaatctatgagcatgggag
atctttccatcttctgagatcttctttgatttcttttttcagagaattca
agttcttatcatacatatctttcactttcttagatagaatcacaccaagg
tatttcatattatttgtacctattgtaaagggtgttgtttccctaatttc
tttctcatccggtttatactttgtgtagagtataaggccttggcttcaca
caatatactgtgaccaaggtacataagtaaataaacagttttctcacatg
tttctttggctatggtggtttttacagcaacagaatctaagacatcacct
aaatggtaaattgcctctgttgggattttgaatatcatagattcctgatg
tataaagggctctgatttgaaaagagaaagaagaatgcatgttagcagat
ggagagcaccgtgacagtaatgcatatgatagcaccagaagcactgcact
ttgggatagctttccaaatactagggagaatgctagatatccaattccat
acaaaggagggaccttctatgaaaggactatagattcaattgtcctgcca
ataaggcttgtaagtatgtgaaagacgtcctataacgtgacttgtttcta
agtga
gaattccaaagaaggaggccataatgtcagtgaaagaatgaacttgccaa
gaagagtgagggcaagcaggcaaagatcaagtttcctttttccacattct
ttataggctgccaccagaagatgtggcccaggtttaaaggtggatcttct
caaaaagacctgaatttagggtgagtcttcacacttcaactgattaatca
agaaaagtctttcacaggtgtactcagtcacttggattttagttaattct
agatgtagtcaacttgacaatcaaaaataccagcctgagctacatgacat
tctatctcaaaataaaggatataaaatagagacagatgtatctctcaatg
ggtagaggtgtttgctgccaagctgacaacctgaacttgactcccaggac
ccacgtgatagaaggaaaaaaaaatcaactaatatgaattgtcctctgac
ctccatacatatggacacattaattaattaaaatgcactaacatatttaa
aaaattaaaaagtagtaattacatcagcacacaactaccatattttaaca
gaaaaaaattataaattagtaattagaggaaagttccaccttaatatttt
gtaccatcattctagacaactgtttagtcaaaaaagagatttaaaagaaa
aatccttgggactgggtagataagatagctcagtgataaacagtgagtat
tgctcttccagaggacccaagttcagttcccagcttccatatgaggcagt
tcacaatcacctgtaactccagccctaggggatctgacacctttagcctc
tatcagcacctgcctgcatagatgtgcacataattacacacactattaat
aagtatttaaaataaatattttaataacgaaaactcatctgcgtgtagta
acacacctctttaatcccagccctcaagaggcagaggtgggccaacctgg
tctacatagcacgttctcatccagaatttcatagaaagattctatctcca
aaaagaaaaaagaacgaaaagaagaggaagtgatagggggaaagggaaga
agggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66152816_66153653
seq2: B6Ng01-157O15.b_334_1151

seq1  ATGGTGATCCCAGCAGAGGTTCTTTTATCATTGAGAATAGCTTTTGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATCCCAGCAGAGGTTCTTTTATCATTGAGAATAGCTTTTGCTAT  50

seq1  CCTAGGTCTTTTTGTGATTCGAGATGAATTTGCAAATTGCCCTTTCTAAT  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGTCTTCTTGTGATTCGAGATGAATTTGCAAATTGCCCTTTCTAAT  100

seq1  TAGATGAAGAATTGAGTTGTGATTTTGATGGGGATTGCATTGAATCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAGAATTGAGTTGTGATTTTGATGGGGATTGCATTGAATCTGTA  150

seq1  GATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCTTGCCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCTTGCCAATCT  200

seq1  ATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTGATTTCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTGATTTCTTTT  250

seq1  TTCAGAGAATTCAAGTTCTTATCATACATATCTTTCACTTTCTTAGATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGAATTCAAGTTCTTATCATACATATCTTTCACTTTCTTAGATAG  300

seq1  AATCACACCAAGGTATTTCATATTATTTGTACCTATTGTAAAGGGTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACCAAGGTATTTCATATTATTTGTACCTATTGTAAAGGGTGTTG  350

seq1  TTTCCCTAATTTCTTTCTCATCCGGTTTATACTTTGTGTAGAGTATAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTAATTTCTTTCTCATCCGGTTTATACTTTGTGTAGAGTATAAGG  400

seq1  CCTTGGCTTCACACAATATACTGTGACCAAGGTACATAAGTAAATAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTTCACACAATATACTGTGACCAAGGTACATAAGTAAATAAACA  450

seq1  GTTTTCTCACATGTTTCTTTGGCTATGGTGGTTTTTACAGCAACAGAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTCACATGTTTCTTTGGCTATGGTGGTTTTTACAGCAACAGAATC  500

seq1  TAAGACATCACCTAAATGGTAAATTGCCTCTGTTGGGATTTTGAATATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACATCACCTAAATGGTAAATTGCCTCTGTTGGGATTTTGAATATCA  550

seq1  TAGATTCCTGATGTAATAAAGGGCTCTGATTTGAAAAGAGAAAGAAGAAT  600
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGATTCCTGATGT-ATAAAGGGCTCTGATTTGAAAAGAGAAAGAAGAAT  599

seq1  GCATGTTAGCAGAGTGAGAAGCACCGTGACAGTAATGCATATGATAGCA-  649
      |||||||||||||  ||| |||||||||||||||||||||||||||||| 
seq2  GCATGTTAGCAGATGGAG-AGCACCGTGACAGTAATGCATATGATAGCAC  648

seq1  CAGAAGCACTGCACTTTGGGATAGCTTTCCAATGTACTAGGGAG-ATGCT  698
      ||||||||||||||||||||||||||||||||  |||||||||| |||||
seq2  CAGAAGCACTGCACTTTGGGATAGCTTTCCAA-ATACTAGGGAGAATGCT  697

seq1  AAGAATACCAGATACCATACAAAGAAGGGAACATTCTATGAAAAGGACAT  748
      |   ||| |  || |||||||||| |||| || ||||||| ||||||| |
seq2  A--GATATCCAATTCCATACAAAGGAGGG-ACCTTCTATG-AAAGGAC-T  742

seq1  AGAGATTCAAATTGTACCTGCAAAATAAGGCTTTGTAAATGTATGTGAAA  798
      | |||||| |||||| |||||  |||||||| ||||||  ||||||| ||
seq2  ATAGATTC-AATTGT-CCTGC-CAATAAGGC-TTGTAA--GTATGTG-AA  785

seq1  AGACAGTTTCATTATAACGTGACTGTGTTTCATTAAGTGA  838
      |||| ||     |||||||||||| ||||||  |||||||
seq2  AGAC-GT---CCTATAACGTGACT-TGTTTC--TAAGTGA  818

seq1: chr13_65701551_65702641
seq2: B6Ng01-157O15.g_68_1126

seq1  GAATTCCAAAGAAGGAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGAAGGAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50

seq1  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100

seq1  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGGATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGGATCTTCT  150

seq1  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200

seq1  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250

seq1  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300

seq1  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350

seq1  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACTTGACTCCCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACTTGACTCCCAGGAC  400

seq1  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450

seq1  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500

seq1  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550

seq1  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600

seq1  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650

seq1  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700

seq1  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750

seq1  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCCTC  800

seq1  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850

seq1  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGTA  900

seq1  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGGTGGGCCAACCTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGGTGGGCCAACCTGG  950

seq1  TCTACATAGCACGTTCCCATCCAGAATTCCATAGAAAGATTCTATCTCCA  1000
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  TCTACATAGCACGTTCTCATCCAGAATTTCATAGAAAGATTCTATCTCCA  1000

seq1  AAAAG-AAAAAGAACGAAAAGAAGA-GAAGTGA-AGGGGGGAAGGG-AGA  1046
      ||||| ||||||||||||||||||| ||||||| |||||| ||||| |||
seq2  AAAAGAAAAAAGAACGAAAAGAAGAGGAAGTGATAGGGGGAAAGGGAAGA  1050

seq1  AGGGGGAGAAGAAGGGAAAGGGAGAAGGGGGCAAAGAAGGGGAAA  1091
      ||||||| |                                    
seq2  AGGGGGAAA------------------------------------  1059