BAC Information

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BAC

Clone NameB6Ng01-159B05
Chromosome13 (Build37)
Map Location 88,574,019 - 88,574,871
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159B05.bB6Ng01-159B05.g
ACCDH952847DH952848
length1,2421,000
definitionDH952847|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B05, 5' end.DH952848|Mus musculus domesticus DNA, BAC clone: B6Ng01-159B05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagaccttcaaagaagacctaattccagttctcctcaaact
attcctcaaaatagaaacagaaggtattctacccaatttattctatgaag
gtacaattactctgatacttaaaccacataaacacccaaaaagatagagt
atttcagaccaatttcttttatgaacatcaatgtaaaaatagtaaataaa
attctcagtaactgaatcgaagaacacatcaaaacaatcatccatcagga
tcaagtaggcttcattccaggaatgcagggatggtttaatatatggaaat
ccttcaatgtaatccactataaaaataaactcaacgacaaaaatcacatg
atcatctcattagatgctgagaaaccatttgacaaaatccaacccccttt
aatgataaaagtcttagaaaactcaggaattcaaggcccctaccaaaaca
taataaaagcaagatagagcaaaccagtagccaatatcaaagtaaatgga
gagaagctggaagaaatcccattaaaatcagggactagacaagactccct
actttctctctacctcttcaatatagtaaatagaagtcctagccagagca
attagacaacaaaagtaggtcaagatgatagaaattgtaaagttagaagt
caaaatatcactatttgcataagatatgatagtgtatataagtgacccta
aaaactccaccagaaaactcctaaacctgataaatagtttcagtgaagta
gctgcatataaaattaactcaaacaaatcagtggcctttctctacacaaa
ggataaacaggatgagaaagaaattagggaaacaacaaccttcacaatag
ttataaataatataaaatactttggtgtgattctaactaaggaagtgaaa
gatctgtatgacaagaacttcaagtctctgagaaagaaatcaaagagatc
tcagagatggaagatcgctcatgctcatggattggcagatcatatagtaa
aatggctctctgctgaaagcatctgcagattcatgcatcccatcaattca
ctcatctcatgagtagaaaaggcattgcaattcatctggaataacaaaaa
acataggatagcaaaactctttctcatgataaaagaaccttctggtgaat
cctgctgactagctgtactcaagagcatggtactgcatgtactggtccag
acagaactgtgccattgtataaatgtgagatccaaaataatc
gaattcattgttgatgctttcctgtcatttacagaagacactattgccag
gctcattcctggcctgtaatgggttgaactgagacacagtgtcagatgca
ggtgtagttttaagactgatgttctagctctccaactatactaaaaactt
gatgataacttgtaaaaagtcctaaaatttccttgctcattctgagagtt
aaaaactgctggcttaggtgattaacacctatagcctaaaagctggggat
taaatagtctttggaccttctccacaggaactttcaaggttctaactccc
agcttgttaggtgaagtcaaagaaagaaaaaggcacactttgaaaagtga
ttttagcctttatttctaagttgtctctaaaacattttctgttgctctct
aaaagttctctaaggaagttgactccaaaacattctctctcttctctttg
ttctcagcacttatacattttcaggatatgtgatcacatagtaaaaagtt
caccacaagtataaacataaattcaagtcagaaattgaataagaagttta
caacagagaatgtttacatgcatatccattaagagtagttatatggctaa
atactcactatctgtcacaaattcaacaagttcattgaaggttaaaatca
tgatttttgtattatttaagttttgggtagataaacccagtcaattttat
atcttgtccttagttgcctatttatgacctttagttaactgttttacaac
ctcttggaatgtgttctaagtcgtagatgtagttctatctcagaaggaat
taattcctgatacttgaagacttgcagagttttcactgtagttttgatat
caaaaaagaacttaacagcagtcctattataaagatcttaataataattt
ctaatataattttaggaattcctacaggatcatcattaagaattagaaag
catatatatgtctatatagcatcactacaagacagtatagcctcattgtt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88574019_88574871
seq2: B6Ng01-159B05.g_68_920

seq1  GAATTCATTGTTGATGCTTTCCTGTCATTTACAGAAGACACTATTGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTGATGCTTTCCTGTCATTTACAGAAGACACTATTGCCAG  50

seq1  GCTCATTCCTGGCCTGTAATGGGTTGAACTGAGACACAGTGTCAGATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTCCTGGCCTGTAATGGGTTGAACTGAGACACAGTGTCAGATGCA  100

seq1  GGTGTAGTTTTAAGACTGATGTTCTAGCTCTCCAACTATACTAAAAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGTTTTAAGACTGATGTTCTAGCTCTCCAACTATACTAAAAACTT  150

seq1  GATGATAACTTGTAAAAAGTCCTAAAATTTCCTTGCTCATTCTGAGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATAACTTGTAAAAAGTCCTAAAATTTCCTTGCTCATTCTGAGAGTT  200

seq1  AAAAACTGCTGGCTTAGGTGATTAACACCTATAGCCTAAAAGCTGGGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCTGGCTTAGGTGATTAACACCTATAGCCTAAAAGCTGGGGAT  250

seq1  TAAATAGTCTTTGGACCTTCTCCACAGGAACTTTCAAGGTTCTAACTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTCTTTGGACCTTCTCCACAGGAACTTTCAAGGTTCTAACTCCC  300

seq1  AGCTTGTTAGGTGAAGTCAAAGAAAGAAAAAGGCACACTTTGAAAAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGTTAGGTGAAGTCAAAGAAAGAAAAAGGCACACTTTGAAAAGTGA  350

seq1  TTTTAGCCTTTATTTCTAAGTTGTCTCTAAAACATTTTCTGTTGCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCCTTTATTTCTAAGTTGTCTCTAAAACATTTTCTGTTGCTCTCT  400

seq1  AAAAGTTCTCTAAGGAAGTTGACTCCAAAACATTCTCTCTCTTCTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCTCTAAGGAAGTTGACTCCAAAACATTCTCTCTCTTCTCTTTG  450

seq1  TTCTCAGCACTTATACATTTTCAGGATATGTGATCACATAGTAAAAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCACTTATACATTTTCAGGATATGTGATCACATAGTAAAAAGTT  500

seq1  CACCACAAGTATAAACATAAATTCAAGTCAGAAATTGAATAAGAAGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAAGTATAAACATAAATTCAAGTCAGAAATTGAATAAGAAGTTTA  550

seq1  CAACAGAGAATGTTTACATGCATATCCATTAAGAGTAGTTATATGGCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGAATGTTTACATGCATATCCATTAAGAGTAGTTATATGGCTAA  600

seq1  ATACTCACTATCTGTCACAAATTCAACAAGTTCATTGAAGGTTAAAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCACTATCTGTCACAAATTCAACAAGTTCATTGAAGGTTAAAATCA  650

seq1  TGATTTTTGTATTATTTAAGTTTTGGGTAGATAAACCCAGTCAATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTGTATTATTTAAGTTTTGGGTAGATAAACCCAGTCAATTTTAT  700

seq1  ATCTTGTCCTTAGTTGCCTATTTATGACCTTTAGTTAACTGTTTTACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCCTTAGTTGCCTATTTATGACCTTTAGTTAACTGTTTTACAAC  750

seq1  CTCTTGGAATGTGTTCTAAGTCGTAGATGTAGTTCTATCTCAGAAGGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGAATGTGTTCTAAGTCGTAGATGTAGTTCTATCTCAGAAGGAAT  800

seq1  TAATTCCTGATACTTGAAGACTTGCAGAGTTTTCACTGTAGTTTTGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTGATACTTGAAGACTTGCAGAGTTTTCACTGTAGTTTTGATAT  850

seq1  CAA  853
      |||
seq2  CAA  853