BAC Information

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BAC

Clone NameB6Ng01-167H13
Chromosome13 (Build37)
Map Location 80,398,175 - 80,398,666
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167H13.bB6Ng01-167H13.g
ACCDH958960DH958961
length1,227486
definitionDH958960|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H13, 5' end.DH958961|Mus musculus domesticus DNA, BAC clone: B6Ng01-167H13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactagaccagaaaagaaattcctcccaacatataata
atccgaacaacaaatgcactaaataaatacagaatattaaaagtagtaag
ggataaaggtcaagtaacatataaaggcagacttattagcattataccag
acttctcactagagactataagagccagatgatcctggacagatgttata
cagaccctaagagaacacaaatgccagcccaggctactagaccctgtaaa
actctcaattaccatagatgaagaaaccaaagtattccatgacagaacca
aattcacacaatatctttccacaaatccagcttttctaaggaaaataaga
gaaaactttcaacacaaggagagaaattatgcactagaaaaagcaagaaa
gtaatccttcaacaaacctgaaagaaggcagctacaagaacagaaaccca
acactgtcaacaacaaaaataataggaagaaacaattattttccttaata
tttattaatattactggattcaatttcccaataaaaagacatagactaac
agactggcaacaaaaacaagagccaacattttgctgcatacaggaaacct
atctctgggacaaagacaaacactacctcagagtaaaaggctggaaaaca
actttccaagcaatggtccgaagaaacaagctggagtagccattctaata
tcaaataaaatcgacttcctacccaaagttatcaaaaaagaggaggaggt
gcacttcatactcatcaaaggtaaaatcttccaagatgaactctaaattc
tgaatatatatgctccaaatgcaagggcatccacattcattaaagaaact
atagtaaagctcaaaacacatattataccacacacaataacagtgggaga
cttcagtaccccacttttatcaatagacagatcctggaaatagaaagtaa
acagagacacattgaaattagcaatgtgaacagtatgaaacaaatggatt
tacagacatctacagaatattttgtctaaaataagggatataccactact
gagacttcagatactttctcaaactgtcacaaacagctcatagaatagaa
aaaaatattgatatcatgcatctatcggatcaccccagacaaagctgact
tcagtaacaactaatatgagctacaaattggaaatgaacaatgcctcact
caatgataacttagtccaaggggagga
cacggagggaaagcaggagtgggtgggtgggttggggagcactctcatag
agttaggaggattggggatgggatagggggtttctgcaggggagacctgg
aaaggggaaacatttgaaatgtaaattaaaaaaatatccagttaaaaaat
aataaatatgataaaaataaaatcaataaccattaaaagaaaagtgattt
ttttcatcttaattactaaattcttcttcaaaaacttcttatctttgtcc
acagtacttatatatctttcagaatacatgattatatggtaaaaagttcg
ccaggagtatacacataaattcaaataataaattgaataataagtttaca
atacagaaatttacatgcatatccattaggaataaatatctggagaggca
ttcattatctgtcacagctccacaggttcatggagagttaaaaccataaa
ttattgttgctgttttgaatagataaacccagtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80398175_80398666
seq2: B6Ng01-167H13.g_65_556

seq1  GAATTCCACGGAGGGAAAGCAGGAGTGGGTGGGTGGGTTGGGGAGCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGGAGGGAAAGCAGGAGTGGGTGGGTGGGTTGGGGAGCACTC  50

seq1  TCATAGAGTTAGGAGGATTGGGGATGGGATAGGGGGTTTCTGCAGGGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGTTAGGAGGATTGGGGATGGGATAGGGGGTTTCTGCAGGGGAG  100

seq1  ACCTGGAAAGGGGAAACATTTGAAATGTAAATTAAAAAAATATCCAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAAAGGGGAAACATTTGAAATGTAAATTAAAAAAATATCCAGTTA  150

seq1  AAAAATAATAAATATGATAAAAATAAAATCAATAACCATTAAAAGAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATAAATATGATAAAAATAAAATCAATAACCATTAAAAGAAAAG  200

seq1  TGATTTTTTTCATCTTAATTACTAAATTCTTCTTCAAAAACTTCTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTCATCTTAATTACTAAATTCTTCTTCAAAAACTTCTTATCT  250

seq1  TTGTCCACAGTACTTATATATCTTTCAGAATACATGATTATATGGTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCACAGTACTTATATATCTTTCAGAATACATGATTATATGGTAAAA  300

seq1  AGTTCGCCAGGAGTATACACATAAATTCAAATAATAAATTGAATAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGCCAGGAGTATACACATAAATTCAAATAATAAATTGAATAATAAG  350

seq1  TTTACAATACAGAAATTTACATGCATATCCATTAGGAATAAATATCTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATACAGAAATTTACATGCATATCCATTAGGAATAAATATCTGGA  400

seq1  GAGGCATTCATTATCTGTCACAGCTCCACAGGTTCATGGAGAGTTAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTCATTATCTGTCACAGCTCCACAGGTTCATGGAGAGTTAAAAC  450

seq1  CATAAATTATTGTTGCGGTTTTGAATAGATAAACCCAGTCAA  492
      |||||||||||||||| |||||||||||||||||||||||||
seq2  CATAAATTATTGTTGCTGTTTTGAATAGATAAACCCAGTCAA  492