BAC Information

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BAC

Clone NameB6Ng01-167O18
Chromosome13 (Build37)
Map Location 79,341,019 - 79,486,367
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167O18.bB6Ng01-167O18.g
ACCDH959295DH959296
length1,1201,141
definitionDH959295|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O18, 5' end.DH959296|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,485,234 - 79,486,367)(79,341,019 - 79,342,182)
sequence
gaattccctgagtgtggttggcgcagggctcctctaacacaaaacagctg
ttccacgtgtatctacaaccaggcacaaggaaagatgtaactttgtcatt
gcaaaccagtttaaagcagctttggtgcccttaaatattaatgaaagtca
aggagtagcattgaatactatgccctccagggactgtcactggtcagctc
attgctgtttgtttctgagtgaatcaaattattatctcattgttacattt
gtattctctgccattaatgcagagagcctttgaggcgagaaagagatatt
cttggcacaatggccattaagcccatgggggttaagggaaggccctcact
tagcttattccattgaaataggagtgtagatgaagatcagtgacagaaat
caggttttaatgtgtctaaaacctgagtgagatcatattgaccaagcaag
ataggaaatgagcacccaaagaggaaaaaaaaaaaaaaaaagactgtaac
aggacatatgcaatggtgttaatttcttaatgtgcttttccctgtgagga
acagacattagtatcactcataatataagtggaagttatttcagaacaat
gagtcctgcagtggaactaattgttatcagaataaaaaccacattctgag
tgatatggtttcttcccacttggacttggcaaaacatataatttccccca
gcagcaaaatggttaaaatgaagaagccaggttattacacatttcaattc
cagagtcaaatataaaaatttctattatagggacaattaattacatctca
aaatggcaaatgtgcatccttgtcaggtagagtgtactctgatggccttt
cctcaaacactgaatgtggagatttgatctcttctaatggtgccgagaaa
agggtaattacgctatggtcaaagctaatttgctttctgccagatgactg
ttgtattttatgtacgctgacattttaaagtattacggcactgtgactta
gacaattcagttgtatcgctgtctacagctgcagtgctcgtctactttgc
tgcagaacagtgcctgtacgagtatgacacgacaagagccaccatatggg
gctctttggaatacacaaag
gaattctagaaagttggagtgggctgaaaccatgttcctcaggggtctct
gtctactgtgaataaagctcctttttcttatacactgccaacactcttga
agatgggcttccatttctgtcattcatgcagaacaaaagcaaagctctat
aacctttggtactctgcagaatggatttactaatacttgttcttacagtg
tctcatttaaagaaggttctcaggcttaatgttcataatgcataactgtt
atttataatattgtacaatatgttttataagtattagatctcatgactgt
gtccacatttgttttgatttttaagcacagttccagcgcaataggcatta
acctaatattcagagccatatttgataagctactttgttttcttgggata
gtgaacatatttaactaatgtttccttgaatgcaatacaggtatatattt
ttccatgtgtatgtaagtaccaagagcaggagtgtattatctatgtttaa
tatgtcttttctcctagtagtttattaaaaaacctctttaacagttatat
aggggctcttatgcacaagtggatgtatgcaatgtttaatggcctctcca
tatttcattattttattatatagatgatccatgttagtagaaaacatgtc
agaatattttcagttttaataatatacaaataatttttaaaaagaaagat
atcttgtatgatgatcatgtaatgactgcttctatttctttaggggatat
ggatctgtttagctcattaatctgatcctgatttagctttggtacctggc
gtctgtctaagaaattgtccatttcatccaggtttaccggttttgttggg
tataccttttgtagtaggatctgatgatgttttagatttcctcagattct
gttgtaatgtctgctttttcatttttgattttgttattagatactatcca
tgtgcctttagtttatctggctaaggtttatctatcttgttgattttctc
aagaaccagctcctggttgatgattctttgaatagttctttttgtttcac
ttcatgactcagcctatgtttattatttctgcaaatacccttctggatat
tgcttccttttgtctagagcttagtgtgcgtcaagcggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79485234_79486367
seq2: B6Ng01-167O18.b_44_1163 (reverse)

seq1  CTTTGTGTATCTCAAAGGAGCCCCATATGGT-GCTCTTTGTCCGTGTCAT  49
      |||||||||| || || |||||||||||||| |||| |||| ||||||||
seq2  CTTTGTGTAT-TCCAAAGAGCCCCATATGGTGGCTC-TTGT-CGTGTCAT  47

seq1  TACCTCGTTACAGCCACTG-TCTGCCAGCCAAAGGTAGACCGAGCACTGC  98
         |||| ||||| ||||| |||| ||||  || ||||| ||||||||||
seq2  --ACTCG-TACAGGCACTGTTCTG-CAGC--AAAGTAGA-CGAGCACTGC  90

seq1  AGCTGTAGACAGCGATACAACTGGAATTGTCTAAGGTCAACAGTGCCGTA  148
      |||||||||||||||||||||| ||||||||||| ||| |||||||||||
seq2  AGCTGTAGACAGCGATACAACT-GAATTGTCTAA-GTC-ACAGTGCCGTA  137

seq1  ATTACTTTAAAATGTCAGCGTACAATAAAATACAACAGTTCATCTGGCAG  198
      | ||||||||||||||||||||| |||||||||||||| |||||||||||
seq2  A-TACTTTAAAATGTCAGCGTAC-ATAAAATACAACAG-TCATCTGGCAG  184

seq1  AAAGCAAATTAGCTTTGACCATAGCGTAATTACCCTTTTCTCGGCACCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATTAGCTTTGACCATAGCGTAATTACCCTTTTCTCGGCACCAT  234

seq1  TAGAAGAGATCAAATCTCCACATTCAGTGTTTGAGGAAAGGCCATCAGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAGATCAAATCTCCACATTCAGTGTTTGAGGAAAGGCCATCAGAG  284

seq1  TACACTCTACCTGACAAGGATGCACATTTGCCATTTTGAGATGTAATTAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCTACCTGACAAGGATGCACATTTGCCATTTTGAGATGTAATTAA  334

seq1  TTGTCCCTATAATAGAAATTTTTATATTTGACTCTGGAATTGAAATGTGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCTATAATAGAAATTTTTATATTTGACTCTGGAATTGAAATGTGT  384

seq1  AATAACCTGGCTTCTTCATTTTAACCATTTTGCTGCTGGGGGAAATTATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTGGCTTCTTCATTTTAACCATTTTGCTGCTGGGGGAAATTATA  434

seq1  TGTTTTGCCAAGTCCAAGTGGGAAGAAACCATATCACTCAGAATGTGGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCCAAGTCCAAGTGGGAAGAAACCATATCACTCAGAATGTGGTT  484

seq1  TTTATTCTGATAACAATTAGTTCCACTGCAGGACTCATTGTTCTGAAATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGATAACAATTAGTTCCACTGCAGGACTCATTGTTCTGAAATA  534

seq1  ACTTCCACTTATATTATGAGTGATACTAATGTCTGTTCCTCACAGGGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCACTTATATTATGAGTGATACTAATGTCTGTTCCTCACAGGGAAA  584

seq1  AGCACATTAAGAAATTAACACCATTGCATATGTCCTGTTACAGTCTTTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTAAGAAATTAACACCATTGCATATGTCCTGTTACAGTCTTTTT  634

seq1  TTTTTTTTTTTTCCTCTTTGGGTGCTCATTTCCTATCTTGCTTGGTCAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTCCTCTTTGGGTGCTCATTTCCTATCTTGCTTGGTCAAT  684

seq1  ATGATCTCACTCAGGTTTTAGACACATTAAAACCTGATTTCTGTCACTGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTCACTCAGGTTTTAGACACATTAAAACCTGATTTCTGTCACTGA  734

seq1  TCTTCATCTACACTCCTATTTCAATGGAATAAGCTAAGTGAGGGCCTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCTACACTCCTATTTCAATGGAATAAGCTAAGTGAGGGCCTTCC  784

seq1  CTTAACCCCCATGGGCTTAATGGCCATTGTGCCAAGAATATCTCTTTCTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACCCCCATGGGCTTAATGGCCATTGTGCCAAGAATATCTCTTTCTC  834

seq1  GCCTCAAAGGCTCTCTGCATTAATGGCAGAGAATACAAATGTAACAATGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAAGGCTCTCTGCATTAATGGCAGAGAATACAAATGTAACAATGA  884

seq1  GATAATAATTTGATTCACTCAGAAACAAACAGCAATGAGCTGACCAGTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATAATTTGATTCACTCAGAAACAAACAGCAATGAGCTGACCAGTGA  934

seq1  CAGTCCCTGGAGGGCATAGTATTCAATGCTACTCCTTGACTTTCATTAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTGGAGGGCATAGTATTCAATGCTACTCCTTGACTTTCATTAAT  984

seq1  ATTTAAGGGCACCAAAGCTGCTTTAAACTGGTTTGCAATGACAAAGTTAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGGGCACCAAAGCTGCTTTAAACTGGTTTGCAATGACAAAGTTAC  1034

seq1  ATCTTTCCTTGTGCCTGGTTGTAGATACACGTGGAACAGCTGTTTTGTGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCCTTGTGCCTGGTTGTAGATACACGTGGAACAGCTGTTTTGTGT  1084

seq1  TAGAGGAGCCCTGCGCCAACCACACTCAGGGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGCCCTGCGCCAACCACACTCAGGGAATTC  1120

seq1: chr13_79341019_79342182
seq2: B6Ng01-167O18.g_69_1209

seq1  GAATTCTAGAAAGTTGGAGTGGGCTGAAACCATGTTCCTCAGGGGTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAAAGTTGGAGTGGGCTGAAACCATGTTCCTCAGGGGTCTCT  50

seq1  GTCTACTGTGAATAAAGCTCCTTTTTCTTATACACTGCCAACACTCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACTGTGAATAAAGCTCCTTTTTCTTATACACTGCCAACACTCTTGA  100

seq1  AGATGGGCTTCCATTTCTGTCATTCATGCAGAACAAAAGCAAAGCTCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGCTTCCATTTCTGTCATTCATGCAGAACAAAAGCAAAGCTCTAT  150

seq1  AACCTTTGGTACTCTGCAGAATGGATTTACTAATACTTGTTCTTACAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTGGTACTCTGCAGAATGGATTTACTAATACTTGTTCTTACAGTG  200

seq1  TCTCATTTAAAGAAGGTTCTCAGGCTTAATGTTCATAATGCATAACTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTAAAGAAGGTTCTCAGGCTTAATGTTCATAATGCATAACTGTT  250

seq1  ATTTATAATATTGTACAATATGTTTTATAAGTATTAGATCTCATGACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATATTGTACAATATGTTTTATAAGTATTAGATCTCATGACTGT  300

seq1  GTCCACATTTGTTTTGATTTTTAAGCACAGTTCCAGCGCAATAGGCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACATTTGTTTTGATTTTTAAGCACAGTTCCAGCGCAATAGGCATTA  350

seq1  ACCTAATATTCAGAGCCATATTTGATAAGCTACTTTGTTTTCTTGGGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATATTCAGAGCCATATTTGATAAGCTACTTTGTTTTCTTGGGATA  400

seq1  GTGAACATATTTAACTAATGTTTCCTTGAATGCAATACAGGTATATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACATATTTAACTAATGTTTCCTTGAATGCAATACAGGTATATATTT  450

seq1  TTCCATGTGTATGTAAGTACCAAGAGCAGGAGTGTATTATCTATGTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTGTATGTAAGTACCAAGAGCAGGAGTGTATTATCTATGTTTAA  500

seq1  TATGTCTTTTCTCCTAGTAGTTTATTAAAAAACCTCTTTAACAGTTATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTTTTCTCCTAGTAGTTTATTAAAAAACCTCTTTAACAGTTATAT  550

seq1  AGGGGCTCTTATGCACAAGTGGATGTATGCAATGTTTAATGGCCTCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTCTTATGCACAAGTGGATGTATGCAATGTTTAATGGCCTCTCCA  600

seq1  TATTTCATTATTTTATTATATAGATGATCCATGTTAGTAGAAAACATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTATTTTATTATATAGATGATCCATGTTAGTAGAAAACATGTC  650

seq1  AGAATATTTTCAGTTTTAATAATATACAAATAATTTTTAAAAAGAAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTTCAGTTTTAATAATATACAAATAATTTTTAAAAAGAAAGAT  700

seq1  ATCTTGTATGATGATCATGTAATGACTGCTTCTATTTCTTTAGGGGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTATGATGATCATGTAATGACTGCTTCTATTTCTTTAGGGGATAT  750

seq1  GGATCTGTTTAGCTCATTAATCTGATCCTGATTTAGCTTTGGTACCTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTTTAGCTCATTAATCTGATCCTGATTTAGCTTTGGTACCTGGC  800

seq1  GTCTGTCTAAGAAATTGTCCATTTCATCCAGGTTTACCGGTTTTGTTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTAAGAAATTGTCCATTTCATCCAGGTTTACCGGTTTTGTTGGG  850

seq1  TATACCTTTTGTAGTAGGATCTGATGATGTTTTAGATTTCCTCAGATTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCTTTTGTAGTAGGATCTGATGATGTTTTAGATTTCCTCAGATTCT  900

seq1  GTTGTAATGTCTGCTTTTTCATTTTTGATTTTGTTAATTAGGATACTATC  950
      ||||||||||||||||||||||||||||||||||| |||| |||||||||
seq2  GTTGTAATGTCTGCTTTTTCATTTTTGATTTTGTT-ATTA-GATACTATC  948

seq1  CATGTGCCTTTTAGTTTATCTGGCTAAGGGTTTATCTATCTTGTTGATTT  1000
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  CATGTGCC-TTTAGTTTATCTGGCTAA-GGTTTATCTATCTTGTTGATTT  996

seq1  TCTCAAAGAACCAGCTCCTGGTTTGATTGATTCTTTGAATAGTTCTTTTT  1050
      |||| |||||||||||||||| |||| |||||||||||||||||||||||
seq2  TCTC-AAGAACCAGCTCCTGG-TTGA-TGATTCTTTGAATAGTTCTTTTT  1043

seq1  GTTTCCACTTCATTGACTTCAGCCCTATGTTTTATTATTTCCTGCCAAAT  1100
      |||| ||||||| |||| |||| |||||| |||||||||| ||| |||||
seq2  GTTT-CACTTCA-TGAC-TCAG-CCTATG-TTTATTATTT-CTG-CAAAT  1086

seq1  ACTCTTCTTGGATAAATTTGCTTCCTTTTGTTCTAGAGCTTTTAGGTGTG  1150
      || |||| ||||||   ||||||||||||| ||||||||||    |||||
seq2  ACCCTTC-TGGATA---TTGCTTCCTTTTG-TCTAGAGCTT---AGTGTG  1128

seq1  CTGTCAAGCTGCTA  1164
      | ||||||| ||||
seq2  C-GTCAAGCGGCTA  1141