BAC Information

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BAC

Clone NameB6Ng01-176I05
Chromosome13 (Build37)
Map Location 26,101,949 - 26,102,992
singlet/doubletsinglet
Overlap genenone
Upstream geneMrs2l, LOC675430, Dcdc2a, Nrsn1, Tpi-rs8, LOC214973
Downstream geneLOC666221, LOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176I05.bB6Ng01-176I05.g
ACCGA004029GA004030
length8431,043
definitionB6Ng01-176I05.b B6Ng01-176I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctcaaatggctgaaaatcacttaaagaaatg
tccattgtctttagtcatcatggaaatgcaaatcaaaatgaccctaagat
ttcaccttacaccaatcagaatggttaagatcaaaaactcaactgacagc
acatgctagcaaggatgtggagcaatgtgaacagtccttcattgctggtg
ggagtgcaaacaggtacaaaccgctttggaaatcagatttgcagttgctt
agaaaattggaaatattttttcatcaagacccactatcccactgctgggc
atatgttcaaaaggtgccctcactatacaacagggacacttgcttaacta
tatccataccagctttattcataatagcccaaacctggaaacaaccaaga
tgtgcctcaactaatgaactgataaagaaaatggagtgtgtttacacaat
gagatactattcagctattaaaaacacggatatcatgaaacttgcaggca
gatggatgaaactggagaataagacccagaaagatagatatggtatgtac
tcacttaaaagtagatattagccataaagtgcatgataaacatggcacaa
tcctcaagtccaaaataactgggtaataaggagaacccaaggaaggattt
gtgaatctcactcaaaaatggaagcaaaataatcaatgtatgtggatgga
gagagggaactttgtggaagaggggtggaagagaggaaacaggttatcag
gtgtggagggaggactgggcgtgagaatggaaatcactggggaacctctt
tgggaccagctgaaggccttggactggggaggctattgaggca

gaattctgtgctggcacatacaaatatttaggaaacacatttctgtgggc
tttttcttccacagaattgatatgaaccattttgaaggattttacaagcc
aaatctttaagatacttattttcagtgtactgtcttctgatttaagtcct
atttgataaagagccttttatgtattgaagttaattattctgatttatca
tgggaatggatttacaataatctagcagctgtcaaatgtacagcataata
ccacaaaaagacaaaatttatatttatatagtgaaacacaatgaataagg
caacttacaggaaaacaagaacgtttatttggggcttacagttttagagg
ggtaggagtctgtcaccgtgatgggatgcaggcagcctaatattggatga
agcttggggactcttatagaagagttgggggaaggattgaggtccctgaa
ggggataggaactccaggacaagaccaacataactcaaatgacttggacc
cttgggggctctgaacactgatccaacaaccaaagagcatacacaggctg
tacctacacccccctgaacacatgtggcagatgtgcagcttggtcttcat
ttgggtcctgaacaactgtaacgaggcctatctttaaagctattgtatgt
ctgtggtatccatttccgtaatttggctgccttgtctggtttcagtgaaa
aaagaaagatctagccctgtagagacttgatgtgccagggtagaagcata
caggggaggctgcactgtctcagagaagaagggaaatgggagtgggaaag
actgtgggaagggggccaggaggggaggcagtgaccaggatgtaaagtaa
ataaagatttaaagaaaaagaaatcccttttctttttctctaactgtact
taagttgtttcagcctttccatccactcttaagttcatgatgtcagctat
tcttatacattgggtaatatcgttcttactttagtcctcactcctaacag
ttttgctaagacatggctggtcatgagccctcaaagttcacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26101949_26102992
seq2: B6Ng01-176I05.g_68_1110

seq1  GAATTCTGTGCTGGCACATACAAATATTTAGGAAACACATTTCTGTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCTGGCACATACAAATATTTAGGAAACACATTTCTGTGGGC  50

seq1  TTTTTCTTCCACAGAATTGATATGAACCATTTTGAAGGATTTTACAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTCCACAGAATTGATATGAACCATTTTGAAGGATTTTACAAGCC  100

seq1  AAATCTTTAAGATACTTATTTTCAGTGTACTGTCTTCTGATTTAAGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTAAGATACTTATTTTCAGTGTACTGTCTTCTGATTTAAGTCCT  150

seq1  ATTTGATAAAGAGCCTTTTATGTATTGAAGTTAATTATTCTGATTTATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATAAAGAGCCTTTTATGTATTGAAGTTAATTATTCTGATTTATCA  200

seq1  TGGGAATGGATTTACAATAATCTAGCAGCTGTCAAATGTACAGCATAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATGGATTTACAATAATCTAGCAGCTGTCAAATGTACAGCATAATA  250

seq1  CCACAAAAAGACAAAATTTATATTTATATAGTGAAACACAATGAATAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAAGACAAAATTTATATTTATATAGTGAAACACAATGAATAAGG  300

seq1  CAACTTACAGGAAAACAAGAACGTTTATTTGGGGCTTACAGTTTTAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTACAGGAAAACAAGAACGTTTATTTGGGGCTTACAGTTTTAGAGG  350

seq1  GGTAGGAGTCTGTCACCGTGATGGGATGCAGGCAGCCTAATATTGGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGAGTCTGTCACCGTGATGGGATGCAGGCAGCCTAATATTGGATGA  400

seq1  AGCTTGGGGACTCTTATAGAAGAGTTGGGGGAAGGATTGAGGTCCCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGGGACTCTTATAGAAGAGTTGGGGGAAGGATTGAGGTCCCTGAA  450

seq1  GGGGATAGGAACTCCAGGACAAGACCAACATAACTCAAATGACTTGGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAGGAACTCCAGGACAAGACCAACATAACTCAAATGACTTGGACC  500

seq1  CTTGGGGGCTCTGAACACTGATCCAACAACCAAAGAGCATACACAGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGGCTCTGAACACTGATCCAACAACCAAAGAGCATACACAGGCTG  550

seq1  TACCTACACCCCCCTGAACACATGTGGCAGATGTGCAGCTTGGTCTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACACCCCCCTGAACACATGTGGCAGATGTGCAGCTTGGTCTTCAT  600

seq1  TTGGGTCCTGAACAACTGTAACGAGGCCTATCTTTAAAGCTATTGTATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCCTGAACAACTGTAACGAGGCCTATCTTTAAAGCTATTGTATGT  650

seq1  CTGTGGTATCCATTTCCGTAATTTGGCTGCCTTGTCTGGTTTCAGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTATCCATTTCCGTAATTTGGCTGCCTTGTCTGGTTTCAGTGAAA  700

seq1  AAAGAAAGATCTAGCCCTGTAGAGACTTGATGTGCCAGGGTAGAAGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGATCTAGCCCTGTAGAGACTTGATGTGCCAGGGTAGAAGCATA  750

seq1  CAGGGGAGGCTGCACTGTCTCAGAGAAGAAGGGAAATGGGAGTGGGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAGGCTGCACTGTCTCAGAGAAGAAGGGAAATGGGAGTGGGAAAG  800

seq1  ACTGTGGGAAGGGGGCCAGGAGGGGAGGCAGTGACCAGGATGTAAAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGAAGGGGGCCAGGAGGGGAGGCAGTGACCAGGATGTAAAGTAA  850

seq1  ATAAAGATTTAAAAGAAAAAGAAATCCCTTTTCTTTTTCTCTAACTGTAC  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATTT-AAAGAAAAAGAAATCCCTTTTCTTTTTCTCTAACTGTAC  899

seq1  TTTAGGTTGTTTCAGCC-TTCCATCCACTCTTTAAGTTCATGATGTCAGC  949
       ||| |||||||||||| |||||||||||| |||||||||||||||||||
seq2  -TTAAGTTGTTTCAGCCTTTCCATCCACTC-TTAAGTTCATGATGTCAGC  947

seq1  TATTC-TATACATT-GGTAATATCGTTCTTACTTTAGTCCTCACTCCTAA  997
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TATTCTTATACATTGGGTAATATCGTTCTTACTTTAGTCCTCACTCCTAA  997

seq1  CAAGTTTTGCTAAGACATGG-TTGTCATGAGCCCTCAAAAGTTCACGC  1044
      | |||||||||||||||||| | ||||||||||||| |||||||||||
seq2  C-AGTTTTGCTAAGACATGGCTGGTCATGAGCCCTC-AAAGTTCACGC  1043


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