BAC Information

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BAC

Clone NameB6Ng01-176P23
Chromosome13 (Build37)
Map Location 50,760,699 - 50,761,538
singlet/doubletsinglet
Overlap genenone
Upstream geneNol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904
Downstream geneLOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176P23.bB6Ng01-176P23.g
ACCGA004387GA004388
length8421,152
definitionB6Ng01-176P23.b B6Ng01-176P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactaccaaactcaaggcactctgaagaatcaggagcccctcct
cctgccaccactgtgctgtgtgtcaggtcctactggacatacccaataca
caaagtgtggagggacaggacctagggagtcatgctcccctttacccagt
catttccatctgcacacattgcacattgtcaagccatggtggacactgcc
ctgctgttatcccataggaactcctaggtatccagcctttcccccagtgc
ccagcttgtcccatgtatactagtatatcagagcctattggattcccttg
atccctgtagctaacgcacatcttctgccagttctcataacatactggga
attctgatgcacacttccaccctctgttactttactgttgtgtttcagga
tttgttatgcatcttctgacaatccttccctccttctttcatagttcctt
tcctagcagtgtagggggaggggcagcagcagcatggtatcatagctagc
agcatgtgtgtttgtttgtgtgtgtgtatgtgtgtgtgttggcagattta
ccctgctggtcctccatttgtacaattattaggctgaaaggtcatgtctt
tatcttttccagctgaagctgcaaacaaaattcctgaacaggatgcgaaa
gtgtttcagctgagccttgagaggtgaacgtaccttggcacctgtcccct
ggatgggacaacttgaggaagggccatcaatattcctgttccctacccag
gacactgctaatgtgcatatgaggagtagtccaccactaactctctatcc
ctgaagggttttcactgtcctgaagaggcacaacttgtgtaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgatgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctagcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaattgatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggggggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggaaacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatctagagactgccatatccagggatctaccccataatc
agcatccaaacgctgacaccattgcatgcactagcaagattttatcaaaa
ggaccgagatgtagctgtctcttgtgagactatgccagggcctagcaaac
acatatgtgggatgctcagagtcagctaatggatggatcacagggcttcc
caatggaggagctagagaaagtaccatgagctaagggatctgcatcttat
agtggacactgtatggactaccagtacatggagctcttgactctagatgc
ataattgtatcaaaagaaatgcttagttcggccatcacctggaagagaag
tcaatgactgccactttatatgcccaagtacatgagaactctctcagggt
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50760699_50761538
seq2: B6Ng01-176P23.b_46_886 (reverse)

seq1  TACAC-AGTTGTGCCTACTTCAGGACAGTGAAAACCCTTCAGGGATAGAG  49
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  TACACAAGTTGTGCCT-CTTCAGGACAGTGAAAACCCTTCAGGGATAGAG  49

seq1  AGTTAGTGGTGGACTTACTCCTCATATGCACATTAGCAGTGTCCTGGGTA  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTTAGTGGTGGAC-TACTCCTCATATGCACATTAGCAGTGTCCTGGGTA  98

seq1  GGGAACAGGAATATTGATGGCCCTTCCTCAAGTTGTCCCATCCAGGGGAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGGAATATTGATGGCCCTTCCTCAAGTTGTCCCATCCAGGGGAC  148

seq1  AGGTGCCAAGGTACGTTCACCTCTCAAGGCTCAGCTGAAACACTTTCGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCCAAGGTACGTTCACCTCTCAAGGCTCAGCTGAAACACTTTCGCA  198

seq1  TCCTGTTCAGGAATTTTG-TTGCAGCTTCAGCTGGAAAAGAT-AAGACAT  247
      |||||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  TCCTGTTCAGGAATTTTGTTTGCAGCTTCAGCTGGAAAAGATAAAGACAT  248

seq1  GACCTTTCAGCCTAATAATTGTACAAATGGAGGACCAGCAGGGTAAATCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTCAGCCTAATAATTGTACAAATGGAGGACCAGCAGGGTAAATCT  298

seq1  GCCAACACACACACATACACACACACAAACAAACACACATGCTGCTAGCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACACACACACATACACACACACAAACAAACACACATGCTGCTAGCT  348

seq1  ATGATACCATGCTGCTGCTGCCCCTCCCCCTACACTGCTAGGAAAGGAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACCATGCTGCTGCTGCCCCTCCCCCTACACTGCTAGGAAAGGAAC  398

seq1  TATGAAAGAAGGAGGGAAGGATTGTCAGAAGATGCATAACAAATCCTGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAGAAGGAGGGAAGGATTGTCAGAAGATGCATAACAAATCCTGAA  448

seq1  ACACAACAGTAAAGTAACAGAGGGTGGAAGTGTGCATCAGAATTCCCAGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACAGTAAAGTAACAGAGGGTGGAAGTGTGCATCAGAATTCCCAGT  498

seq1  ATGTTATGAGAACTGGCAGAAGATGTGCGTTAGCTACAGGGATCAAGGGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATGAGAACTGGCAGAAGATGTGCGTTAGCTACAGGGATCAAGGGA  548

seq1  ATCCAATAGGCTCTGATATACTAGTATACATGGGACAAGCTGGGCACTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATAGGCTCTGATATACTAGTATACATGGGACAAGCTGGGCACTGG  598

seq1  GGGAAAGGCTGGATACCTAGGAGTTCCTATGGGATAACAGCAGGGCAGTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGCTGGATACCTAGGAGTTCCTATGGGATAACAGCAGGGCAGTG  648

seq1  TCCACCATGGCTTGACAATGTGCAATGTGTGCAGATGGAAATGACTGGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCATGGCTTGACAATGTGCAATGTGTGCAGATGGAAATGACTGGGT  698

seq1  AAAGGGGAGCATGACTCCCTAGGTCCTGTCCCTCCACACTTTGTGTATTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGAGCATGACTCCCTAGGTCCTGTCCCTCCACACTTTGTGTATTG  748

seq1  GGTATGTCCAGTAGGACCTGACACACAGCACAGTGGTGGCAGGAGGAGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTCCAGTAGGACCTGACACACAGCACAGTGGTGGCAGGAGGAGGG  798

seq1  GCTCCTGATTCTTCAGAGTGCCTTGAGTTTGGTAGTTGAATTC  840
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGATTCTTCAGAGTGCCTTGAGTTTGGTAGTTGAATTC  841