BAC Information

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BAC

Clone NameB6Ng01-178E04
Chromosome13 (Build37)
Map Location 62,583,859 - 62,584,122
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624056, LOC665717, Ctsm, Cts3, EG665401, LOC624140, EG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik
Downstream geneLOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178E04.bB6Ng01-178E04.g
ACCGA005303GA005304
length1,0121,074
definitionB6Ng01-178E04.b B6Ng01-178E04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatgtagcaagtttttactctccaagaggcattatatattca
acatagttcacaaagtgatagttctatgagaaaagtaaacacttcaaaca
caaatatacaataagtgattaatatgcataatatattactgtaaagtaaa
agtaattgtttgaattacattcatataattacttcttaaaattatacgaa
taatattgaactagctagatatagtcacaaaataagttgtttttaaaaat
aatattattaattgagaatatacagcactcattacaccattcagaaagct
gaagccagatgattgtgtttaaggctagtctgaactctgcggcaagattg
tttcagaaacataatcaaacaaagtaacagaaatagtaactacaaggaaa
attattttatttgagttggtatgagaaatgacaactccaagctaaaatta
ctgttgcttttcttttcttttttttttccattttttattaggtatttaac
tcatttacatttccaatgctataccaaaagtcccccatatccacccaccc
ccactcccctgcccacccactccccctttttggccctggtgttcccctgt
actggggcatataaagtttgcaagtccaatgggcctctctttccagtgat
ggccgactaggccatcttttgatatatatgcagctagagtcaagagctcc
ggggtactggttagttcataatgttgttccacctatagggttgcagatcc
ctttagctccttggctactttctctagctcctccattgggagccctatga
tccatccattagctgactgtgagcatccacttctgtgtttgctaggcccc
ggcatagtctcacaagagacggctacatctgggtcctttcaataaaatct
tgctagtgtatgcaatggtgtcagcgtttggatgctgattatggggtgga
tcccttggatatggcagtctctacatggtccatcctttcatctcagctca
aacttgtctctg
gaattcaacaggtagcaagatacctctcctttaaaattataggtaaaaag
aaataaagatttgtctgtttttaaaaatgtagatatatgtcaccactata
tatatatatatatatacacatatatatatgttaacatatatataataata
tgttagcatattctatgctgtgcctataacatattaatttataataaatg
atatctggttaataatattggtaacagaaagttggtttaaaacaactcag
agttaaagccaccctgaataacaattgccaaacaaggtctctaaaggtac
atttaaaataggataatattttctcctaagaaccagcctgaaaaagtagg
atttaaaaatgttttttttatgagttattaaagctgcaccttcatgtgtt
catatacaagaactggcagccaaacattgtaacatgaaaataatatactt
gatattgatttgaggaactggattgtttcaactgcttaaaaatttaaaaa
ttggttttgtcttcgaaaatttatggctatgctctttgatatcactgttt
taaaaggagatactttattttgatattatgaaaggaacttttaatatata
tatatatgtacatatatacttatatatgtatataactcagtaattttaaa
atttactaaataattaaaatgtctttattggtatgatggttacagtaaaa
aaatgctttattggacaacaacaatgaggttataatatatgggatggagg
agataattttgatggagaaagcttaagcattacctataattgatggctat
aaatcagatgatcagaatagtgaatacggtagcaaaagcttttaaaataa
aaccaaacaggctacagtttcctatcaggagagaaaagaaagagttgtca
gaaagctgcggcttccttgagacagtcttctaaatgcattagaaaatcgt
aaaaatctgcacatgaaagatgtcgattcatagtcagaagagccactgcc
gctttaaatagaaaactcttcttgtacagtaagctagccgcaatttgcca
aaagtcaagctcatggtattaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62583859_62584122
seq2: B6Ng01-178E04.b_524_787 (reverse)

seq1  AGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTA  50

seq1  GCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAG  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATATATATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAG  100

seq1  GCCCATTGGACACGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGG  150
      |||||||||||  ||||||||||||||||||||||||||||||| |||||
seq2  GCCCATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACACCAGG  150

seq1  GCCATAAAAGGCGAGTGGGTGGGTAGGGGAGTGGGGGTGGGTGGCTATGG  200
      |||| ||| || ||||||||||| |||||||||||||||||||| |||||
seq2  GCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGG  200

seq1  GGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACCTAATAA  250
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGACTTTTGGTATAGCATTGGAAATGTAAATGAGTTAAATACCTAATAA  250

seq1  AAAATGGGAAAAAA  264
      ||||||| ||||||
seq2  AAAATGGAAAAAAA  264