BAC Information

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BAC

Clone NameB6Ng01-179G10
Chromosome13 (Build37)
Map Location 67,395,139 - 67,592,342
singlet/doubletdoublet
Overlap geneZfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458
Downstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179G10.bB6Ng01-179G10.g
ACCGA006132GA006133
length537738
definitionB6Ng01-179G10.b B6Ng01-179G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,395,139 - 67,395,681)(67,591,609 - 67,592,342)
sequence
tccagtgattctgatatacttttttatgttcaatgccttggccacattct
ttgcatgtatagcattttccccctggcgaagaaggattgagaattgaatg
gaagctgagtaatattctgtatatttacaatggttatttttaaaaccaaa
cattaactcatattcacacttgtctataaaaatgattaactacattcaaa
tttctatctgtactcattgaagcctaagtacaacacagcataggtgaaag
ccatgtaaacttccactgaaataagaccatgaccacacggaacatggaaa
caaaggaatattaatcaaagtcaaacatgtaaggaaagcataacatcaac
atgaaaatgcattatagcattatataaatacaaatcaaccccttaaacaa
atacaaaaattttattactagttaaaaacaacagataaaatagtgtaact
tggaaaacatctgaataaaaaatttttttctgaatatataaaacctgaat
aaacaatttacatttatatatgtgtgggtgtgtgggt
gaattcattctgaagataatcctacaagtgtggagaatgtggcaaaaggt
tttgttcttttcctcaccttcaatatcaccaaagatttcattctggagag
aaaccatacaaatgtgaacaatgtgggaaaacattttctactctctctta
ccttccttggcataaattgcgtcattctggggagaagtcatacaaatgtg
aaaaatgtgggaaaatgttttactctactttggacctggaaaaacaccaa
aaaattcatgaatataagtgtggggaatgtcactatggctttcctaatta
tgcagcccttactgcacaccagagagttcatactggagagaaacctcatg
tatgcgaacaatgtgggaaagacttttctaggatcgatagcctcaatcag
catcagcttgttcatactggagagaaaccctataaatgtgaaaaatgtgg
caagtgcttttaccgatcttcatcccttaaaagacatcaaggaattcact
cttaatagaaaatttgacaagtgatatgtgattaaaaaatctttgcaaaa
tattcagaccttgcccaagacaaaggaaatcattgagtagagaagccata
tgcctgtgaggaatgctgagtggtttaacatgaagtcaacactttctacc
atcaataaacgttcattctgcagagaaactttgcccaactgtggaggaag
tgacaggctttttagtgtttcttcaacccttaaataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67395139_67395681
seq2: B6Ng01-179G10.b_34_576

seq1  GAATTCTCCAGTGATTCTGATATACTTTTTTATGTTCAAAGCCTTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  GAATTCTCCAGTGATTCTGATATACTTTTTTATGTTCAATGCCTTGGCCA  50

seq1  CATTCTTTGCATGTATAGCATTTTCCCCCTGGTGAAGAAGGATTGAGAAT  100
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CATTCTTTGCATGTATAGCATTTTCCCCCTGGCGAAGAAGGATTGAGAAT  100

seq1  TGAATGGAAGCTGAGTAATATTCTGTATATTTACAATGGTTATTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGAAGCTGAGTAATATTCTGTATATTTACAATGGTTATTTTTAAA  150

seq1  ACCAAACATTAACTCATATTCACACTTGTCTATAAAAATGATTAACTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACATTAACTCATATTCACACTTGTCTATAAAAATGATTAACTACA  200

seq1  TTCAAATTTCTATCTGTACTCATTGAAGCCTAAGTACAACACAGCATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTTCTATCTGTACTCATTGAAGCCTAAGTACAACACAGCATAGG  250

seq1  TGAAAGCCATGTAAACTTCCACTGAAATAAGACCATGACCACACGGAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCCATGTAAACTTCCACTGAAATAAGACCATGACCACACGGAACA  300

seq1  TGGAAACAAAGGAATATTAATCAAAGTCAAACATGTAAGGAAAGCATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACAAAGGAATATTAATCAAAGTCAAACATGTAAGGAAAGCATAAC  350

seq1  ATCAACATGAAAATGCATTATAGCATTATATAAATACAAATCAACCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATGAAAATGCATTATAGCATTATATAAATACAAATCAACCCCTT  400

seq1  AAACAAATACAAAAATTTTATTACTAGTTAAAAACAACAGATAAAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATACAAAAATTTTATTACTAGTTAAAAACAACAGATAAAATAGT  450

seq1  GTAACTTGGAAAACATCTGAATAAAAAATTTTTTTCTGAATATATAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTGGAAAACATCTGAATAAAAAATTTTTTTCTGAATATATAAAAC  500

seq1  CTGAATAAACAATTTACATTTATATATGTGTGGGTGTGTGGGT  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAACAATTTACATTTATATATGTGTGGGTGTGTGGGT  543

seq1: chr13_67591609_67592342
seq2: B6Ng01-179G10.g_70_807 (reverse)

seq1  GTTATTTAAGGTTTGAAGAAACACT-AAAAGCCTGTCACTTCCTCCACAG  49
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  GTTATTTAAGGGTTGAAGAAACACTAAAAAGCCTGTCACTTCCTCCACAG  50

seq1  TTGGGC-AAGTTTCTCTGCAGAATGAACG-TTATTGATGGTAGAAAGTGT  97
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGGGCAAAGTTTCTCTGCAGAATGAACGTTTATTGATGGTAGAAAGTGT  100

seq1  TGACTTCATGTTAAACCACTCAGCATTCCTCACAGGCATATGGCTTCTCT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCATGTTAAACCACTCAGCATTCCTCACAGGCATATGGCTTCTCT  150

seq1  ACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGC-AAGAT  196
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTCAATGATTTCCTTTGTCTTGGGCAAGGTCTGAATATTTTGCAAAGAT  200

seq1  TTTTT-ATCACATATCACTTGTCAAATTTTCTATTAAGAGTGAATTCCTT  245
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCACATATCACTTGTCAAATTTTCTATTAAGAGTGAATTCCTT  250

seq1  GATGTCTTTTAAGGGATGAAGATCGGTAAAAGCACTTGCCACATTTTTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTTTAAGGGATGAAGATCGGTAAAAGCACTTGCCACATTTTTCA  300

seq1  CATTTATAGGGTTTCTCTCCAGTATGAACAAGCTGATGCTGATTGAGGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATAGGGTTTCTCTCCAGTATGAACAAGCTGATGCTGATTGAGGCT  350

seq1  ATCGATCCTAGAAAAGTCTTTCCCACATTGTTCGCATACATGAGGTTTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGATCCTAGAAAAGTCTTTCCCACATTGTTCGCATACATGAGGTTTCT  400

seq1  CTCCAGTATGAACTCTCTGGTGTGCAGTAAGGGCTGCATAATTAGGAAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTATGAACTCTCTGGTGTGCAGTAAGGGCTGCATAATTAGGAAAG  450

seq1  CCATAGTGACATTCCCCACACTTATATTCATGAATTTTTTGGTGTTTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCATAGTGACATTCCCCACACTTATATTCATGAATTTTTTGGTGTTTTTC  500

seq1  AAGGTCCAAAGTAGAGTAAAACATTTTCCCACATTTTTCACATTTGTATG  545
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCAAAGTAGAGTAAAACATTTTCCCACATTTTTCACATTTGTATG  550

seq1  ACTTCTCCCCAGAATGACGCAATTTATGCCAAGGAAGGTAAGAGAGAGTA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCCCAGAATGACGCAATTTATGCCAAGGAAGGTAAGAGAGAGTA  600

seq1  GAAAATGTTTTCCCACATTGTTCACATTTGTATGGTTTCTCTCCAGAATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGTTTTCCCACATTGTTCACATTTGTATGGTTTCTCTCCAGAATG  650

seq1  AAATCTTTGGTGATATTGAAGGTGTGGAAAAGAACAAAACCTTTTGCCAC  695
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAATCTTTGGTGATATTGAAGGTGAGGAAAAGAACAAAACCTTTTGCCAC  700

seq1  ATTCTCCACACTTGTAGGAATTCTCTTCAGAATGAATTC  734
      |||||||||||||||||| ||| ||||||||||||||||
seq2  ATTCTCCACACTTGTAGG-ATTATCTTCAGAATGAATTC  738