BAC Information

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BAC

Clone NameB6Ng01-179N22
Chromosome13 (Build37)
Map Location 15,100,832 - 15,101,768
singlet/doubletsinglet
Overlap genenone
Upstream geneTbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32, Psma2, AW209491, EG665099
Downstream geneLOC670994, EG625121, Gli3, LOC665157
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179N22.bB6Ng01-179N22.g
ACCGA006470GA006471
length943887
definitionB6Ng01-179N22.b B6Ng01-179N22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattatgttactcatgatgccatacaaaagaaaatatatgaataa
gttttctaaaaaacttatttttatgaatattttcagatagtggttgacca
catataattgctattataggacacaaatcttcaaacaagtataactacta
tagtgagttgtctgttatctggcttatgaaaacttaaggtcaaaggtaac
tatagataatatctagtttgatgataacagttcaaatggtctatatattt
aacctaaaattatgtctgatgacaaagaggtagaaggagacaaaataata
tcacatgctatagtctaagtgttttcagaattgatgtactgacttatact
agggaaaaatgaagaccgggcccagaataatttgtgtaggtgtacagcta
cacatatgctcatgcttaacatgattttacagatatttctggtgcatagt
aacattgtaccttctaattaatgtgactctttttggccaatgtttcttgt
ggattggtttagggctaagcatttcattggaagtcattccagagctctct
ttatacaggatatctctgtttctaagatctagatggtggctacttaaaat
aactctggagatcagaggcccctggcaacactaatggatgggtatttgtc
caggaagaataagagataagtcattgtgggtttagtattttgaggctcat
ccagttaattaacatgacctgacagatagtgtgaaagagatgtctgtttc
aactgctagagaacacctttcctattccaagcaaattggaaaacatgcag
agactaggtcctcatacataccaaggacttggagaatggttgcagttacc
cttttgggaataaaggagaaaaacaaatgagatcttaaaaattagcaaca
acaaacttcctcgttttactcccccaggcctcctgtggatgtt
gaattctccatttatctatgatccccattttgaaatagggttatttggtt
ctctggagtctaacttcttgaggtctctatcggatatagaattggtaaat
atcttttccaaatctgttgattaccattttgtcctattgacagtgtcctt
tgccttacagaagctttgcaattttatgaggtcccatttgttaatacttg
atcatagagcataagtcagtcattggtgttctgttcagaaacatttcccc
tgtgcccatgggtttgaggctcttgcccgcttctatttgtttcagtgtat
ctggttttatgtggtggaccttgatccacttggatttgagctttgtacag
gtagataagaacggattaattgcattcttctatattttgaccactgttga
accagcaacatttgttgaaaatgctgtcttttttccactggatggtttta
gcttctttgtcaaagatcaagtgatcataggtgtctggattcatttttgg
gttttcaattctattccacttctctacctgcctgtcactctaccaatacc
atacagttttttatcactattgatgtataatacagttaaaagtcaggaat
tggtgctttccccaaatgtttgtttattgttgataatggtttttcgctat
cctgggtctttgtttattccaaatgaatgtgagaattgctcttttctaac
tctataaaaattgagttgggaattttgatgggaatttgcattgactctgt
aaaagtctttggcaagatggcttttactatattaatataatcaatccatt
gagcaatgggagaactttctatcttcgtggtttattttttttattttctt
ttcttcagagatcccgaagttattggccatacagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15100832_15101768
seq2: B6Ng01-179N22.b_49_991 (reverse)

seq1  AACATCCACAGGA-GCCT-GGGGAGT-AAACGAGGAGGTTTTGTTGTTGC  47
      ||||||||||||| |||| ||||||| ||||||||| | |||||||||||
seq2  AACATCCACAGGAGGCCTGGGGGAGTAAAACGAGGAAG-TTTGTTGTTGC  49

seq1  TTATTTTT-AGATCTCATTTGTTTTTCTCCTTTATT-CCAAAAGGGTAAC  95
      | |||||| ||||||||||||||||||||||||||| |||||||||||||
seq2  TAATTTTTAAGATCTCATTTGTTTTTCTCCTTTATTCCCAAAAGGGTAAC  99

seq1  TGCAACCATTCTCCAAGTCCTTGGTATGTATGAGGACCTAGTCTCTGCAT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACCATTCTCCAAGTCCTTGGTATGTATGAGGACCTAGTCTCTGCAT  149

seq1  GTTTTCCAATTTGCTTGGAATAGG-AAGGTGTTCTCTAGCAGTTGAAACA  194
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTTTCCAATTTGCTTGGAATAGGAAAGGTGTTCTCTAGCAGTTGAAACA  199

seq1  GACATCTCTTTCACACTATCTGTCAGGTCATGTTAATTAACTGGATGAGC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCTCTTTCACACTATCTGTCAGGTCATGTTAATTAACTGGATGAGC  249

seq1  CTC-AAATACTAAACCCACAATGACTTATCTCTTATTCTTCCTGGACAAA  293
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAATACTAAACCCACAATGACTTATCTCTTATTCTTCCTGGACAAA  299

seq1  TACCCATCCATTAGTGTTGCCAGGGGCCTCTGATCTCCAGAGTTATTTTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATCCATTAGTGTTGCCAGGGGCCTCTGATCTCCAGAGTTATTTTA  349

seq1  AGTAGCCACCATCTAGATCTTAGAAACAGAGATATCCTGTATAAAGAGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCACCATCTAGATCTTAGAAACAGAGATATCCTGTATAAAGAGAG  399

seq1  CTCTGGAATGACTTCCAATGAAATGCTTAGCCCTAAACCAATCCACAAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAATGACTTCCAATGAAATGCTTAGCCCTAAACCAATCCACAAGA  449

seq1  AACATTGGCCAAAAAGAGTCACATTAATTAGAAGGTACAATGTTACTATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGGCCAAAAAGAGTCACATTAATTAGAAGGTACAATGTTACTATG  499

seq1  CACCAGAAATATCTGTAAAATCATGTTAAGCATGAGCATATGTGTAGCTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAATATCTGTAAAATCATGTTAAGCATGAGCATATGTGTAGCTG  549

seq1  TACACCTACACAAATTATTCTGGGCCCGGTCTTCATTTTTCCCTAGTATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTACACAAATTATTCTGGGCCCGGTCTTCATTTTTCCCTAGTATA  599

seq1  AGTCAGTACATCAATTCTGAAAACACTTAGACTATAGCATGTGATATTAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTACATCAATTCTGAAAACACTTAGACTATAGCATGTGATATTAT  649

seq1  TTTGTCTCCTTCTACCTCTTTGTCATCAGACATAATTTTAGGTTAAATAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTCCTTCTACCTCTTTGTCATCAGACATAATTTTAGGTTAAATAT  699

seq1  ATAGACCATTTGAACTGTTATCATCAAACTAGATATTATCTATAGTTACC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCATTTGAACTGTTATCATCAAACTAGATATTATCTATAGTTACC  749

seq1  TTTGACCTTAAGTTTTCATAAGCCAGATAACAGACAACTCACTATAGTAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTTAAGTTTTCATAAGCCAGATAACAGACAACTCACTATAGTAG  799

seq1  TTATACTTGTTTGAAGATTTGTGTCCTATAATAGCAATTATATGTGGTCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTTGTTTGAAGATTTGTGTCCTATAATAGCAATTATATGTGGTCA  849

seq1  ACCACTATCTGAAAATATTCATAAAAATAAGTTTTTTAGAAAACTTATTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTATCTGAAAATATTCATAAAAATAAGTTTTTTAGAAAACTTATTC  899

seq1  ATATATTTTCTTTTGTATGGCATCATGAGTAACATAATGAATTC  937
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTCTTTTGTATGGCATCATGAGTAACATAATGAATTC  943