BAC Information

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BAC

Clone NameB6Ng01-183G12
Chromosome13 (Build37)
Map Location 63,283,403 - 63,410,063
singlet/doubletdoublet
Overlap gene2010111I01Rik, Fancc
Upstream geneLOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524
Downstream genePtch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik, EG665575, Hsd17b3, Slc35d2, Zfp367, Habp4, Cdc14b, 1110018J18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183G12.bB6Ng01-183G12.g
ACCGA009040GA009041
length1,1381,136
definitionB6Ng01-183G12.b B6Ng01-183G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,408,935 - 63,410,063)(63,283,403 - 63,284,524)
sequence
gaattcagtaagaaatgtccaccaacccaagagactctgggagcgcacca
aacactgcatgtgatgaggaaaacacaaatggctttcaggggcgctagca
cggtgtaaaaaatgctagcaagtacaaattcaccgtcatcccgtgctggg
cgtctgtggaaagctgacaggtgaggagtgcgggcaggcagggcctttgt
ggactacaggtggtcatgtgccggactttagagtgagcaggtcctagaaa
caccgtagtaacagagttactctacccagaatccacccgtcggtacttac
cccaaagaacgtaaggtagacagacattcaaggggactctgtacacccgt
gtccagactgcgataaaatgtgctgcatacaaataacacatcactcggct
ctaaaaaggagcagctctggtgaggtggctcagcagtaaaggcactgcag
gcctggcaacttgagcatctccccagaacccacataaaggtaggagagac
ccaagacctcttagttgtcctctgatctcacatgtgcaccctgctcattc
ccaacattgtgcacatatgcatggtaattacaaatatagatttaaaaatt
aaagtgaagaaatatggaagatactattctaagctagacaagacaggcag
gtgcacaaagacattagaaaattcacacacaatccttagaacacacagac
tcatgatgacagtctagtgatgccaccaggaacttgggagagcaggggtg
gggttagtgtctgatagatccaaaagattccatttgggaagagaaagttc
agaacacagatggtggtggtcacacggtgattagacacggcactgaagtg
cgctctccaaacaccagagcagtgaattctaggctgtgactattttacca
caataaaaccatttgagccgggcgtggtggcacacgcctttaatcccagc
acttcggtgaggcagaggtagggcggatttcctgagttcgaggtcagcct
ggttcttactaagtgagtgccagggacagctcagggctacacagagtaaa
ccctggtctttggaaaacaaacaaatcaacaacatcacaaaaaccatttg
aaatcctaattataggttcatcaccctgtattacacac
gaattcttgtcttggagttagtaatgctttaataggctaagatacaggga
gctgggctgcccaggccccatacggtggccatgtgtgtctatttcctagt
gtctggactggagttttggcatatacctttaggaccaatgaaatagctga
tgacacatagcttccaggcagctgtgcaaagaaagataaaaatgcaaaat
gagaatagggaccagcactgcctaagcatgctggcctctggccgagacct
gtccattttcaaagtcccagccttgctgcctgaagactttcctccctcta
tgctcatcaataagttgctaacactgaaacaacttaagtgtcctcttaga
ggcttagataaagagaatatggtagatccatgaaataaaccattaactta
caataagaatgagggttgtcacctgcttgagcatgtcatgtgaaccttta
atacagtgtaacttaggaaaggaaccagacacagaagcctacatgcttat
gagttcacttctctgaatcatctaagcaaatctgtagagacacacagact
aatgatatcaaaggttgccgtactgaaaagggattgtccatgcttatggt
gtttctgcagtgttaaagaatgttctgaagttaggtactcatgatagtta
cactgccttatgaatacagtagaagttattggatatgccttttgttttaa
ggttggtttgcttgtttacatgcccacctacttatttattgtgtggtggg
gtgcttgtgcataggtaaagaccagaagaagccacagtttgtctttctga
cactctccacatgttccttttgtgacagaatctttctccctacacctttg
ttgtttctggttttctcagcccatgccccagaaatcccacctgccctcag
ctcccctcagagctgggggttataggttgtgttgaagaggccaagcttgt
gtggtttgctgggaccccaggttccaggcctcacgatgcacatgtgccct
tttcactgctgccacgttttcgagtttccggtcttctgggttttgagaac
gaagtctattgtgttgttccaggtggctagactcatctttagcgcaagag
acctcgacgttgcagtaattctttctttctttcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_63408935_63410063
seq2: B6Ng01-183G12.b_43_1180 (reverse)

seq1  GTGTGTATTACAGGGTGGATGGAACTATAATTTAGATTTCAATGGTTTTT  50
      ||||||| |||||||| |||| | ||||||||  ||||||||  | ||||
seq2  GTGTGTAATACAGGGT-GATGAACCTATAATTAGGATTTCAAATGGTTTT  49

seq1  TGTTGTTGTTGTTGTTTTGTTTTGTTTTTC-AAGA-CAGGGTTT-CTCTG  97
      || || |||||||| |||| |||||||| | |||| |||||||| |||||
seq2  TG-TGATGTTGTTGATTTG-TTTGTTTTCCAAAGACCAGGGTTTACTCTG  97

seq1  TGTAGCCCTG-GCTGT-CCTGGCACTCACTTTGTA--GACCAGGCTGGCC  143
      |||||||||| ||||| |||||||||||||| |||   ||||||||| ||
seq2  TGTAGCCCTGAGCTGTCCCTGGCACTCACTTAGTAAGAACCAGGCTGACC  147

seq1  TCGAACTCA-GAAATCCG-CCTACCTCTGCCTC-CCG-AGTGCTGGGATT  189
      ||||||||| |||||||| |||||||||||||| ||| ||||||||||||
seq2  TCGAACTCAGGAAATCCGCCCTACCTCTGCCTCACCGAAGTGCTGGGATT  197

seq1  AAAGGCGTGTGCCACCACGCCCGGCTC-AATGGTTTTATTGTGGTAAAAT  238
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAGGCGTGTGCCACCACGCCCGGCTCAAATGGTTTTATTGTGGTAAAAT  247

seq1  AGTCACAGCCTAGAATTCACTGCTCTGGTGTTTGGAGAGCGCACTTCAGT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGCCTAGAATTCACTGCTCTGGTGTTTGGAGAGCGCACTTCAGT  297

seq1  GCCGTGTCTAATCACCGTGTGACCACCACCATCTGTGTTCTGAACTTTCT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGTCTAATCACCGTGTGACCACCACCATCTGTGTTCTGAACTTTCT  347

seq1  CTTCCCAAATGGAATCTTTTGGATCTATCAGACACTAACCCCACCCCTGC  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAAATGGAATCTTTTGGATCTATCAGACACTAACCCCACCCCTGC  397

seq1  TCTCCCAAGTTCCTGGTGGCATCACTAGACTGTCATCATGAGTCTGTGTG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAAGTTCCTGGTGGCATCACTAGACTGTCATCATGAGTCTGTGTG  447

seq1  TTCTAAGGATTGTGTGTGAATTTTCTAATGTCTTTGTGCACCTGCCTGTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGATTGTGTGTGAATTTTCTAATGTCTTTGTGCACCTGCCTGTC  497

seq1  TTGTCTAGCTTAGAATAGTATCTTCCATATTTCTTCACTTTAATTTTTAA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTAGCTTAGAATAGTATCTTCCATATTTCTTCACTTTAATTTTTAA  547

seq1  ATCTATATTTGTAATTACCATGCATATGTGCACAATGTTGGGAATGAGCA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATTTGTAATTACCATGCATATGTGCACAATGTTGGGAATGAGCA  597

seq1  GGGTGCACATGTGAGATCAGAGGACAACTAAGAGGTCTTGGGTCTCTCCT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACATGTGAGATCAGAGGACAACTAAGAGGTCTTGGGTCTCTCCT  647

seq1  ACCTTTATGTGGGTTCTGGGGAGATGCTCAAGTTGCCAGGCCTGCAGTGC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATGTGGGTTCTGGGGAGATGCTCAAGTTGCCAGGCCTGCAGTGC  697

seq1  CTTTACTGCTGAGCCACCTCACCAGAGCTGCTCCTTTTTAGAGCCGAGTG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTGCTGAGCCACCTCACCAGAGCTGCTCCTTTTTAGAGCCGAGTG  747

seq1  ATGTGTTATTTGTATGCAGCACATTTTATCGCAGTCTGGACACGGGTGTA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTATTTGTATGCAGCACATTTTATCGCAGTCTGGACACGGGTGTA  797

seq1  CAGAGTCCCCTTGAATGTCTGTCTACCTTACGTTCTTTGGGGTAAGTACC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCCCCTTGAATGTCTGTCTACCTTACGTTCTTTGGGGTAAGTACC  847

seq1  GACGGGTGGATTCTGGGTAGAGTAACTCTGTTACTACGGTGTTTCTAGGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGGTGGATTCTGGGTAGAGTAACTCTGTTACTACGGTGTTTCTAGGA  897

seq1  CCTGCTCACTCTAAAGTCCGGCACATGACCACCTGTAGTCCACAAAGGCC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCACTCTAAAGTCCGGCACATGACCACCTGTAGTCCACAAAGGCC  947

seq1  CTGCCTGCCCGCACTCCTCACCTGTCAGCTTTCCACAGACGCCCAGCACG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCCGCACTCCTCACCTGTCAGCTTTCCACAGACGCCCAGCACG  997

seq1  GGATGACGGTGAATTTGTACTTGCTAGCATTTTTTACACCGTGCTAGCGC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACGGTGAATTTGTACTTGCTAGCATTTTTTACACCGTGCTAGCGC  1047

seq1  CCCTGAAAGCCATTTGTGTTTTCCTCATCACATGCAGTGTTTGGTGCGCT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAAGCCATTTGTGTTTTCCTCATCACATGCAGTGTTTGGTGCGCT  1097

seq1  CCCAGAGTCTCTTGGGTTGGTGGACATTTCTTACTGAATTC  1129
      |||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGTCTCTTGGGTTGGTGGACATTTCTTACTGAATTC  1138

seq1: chr13_63283403_63284524
seq2: B6Ng01-183G12.g_65_1200

seq1  GAATTCTTGTCTTGGAGTTAGTAATGCTTTAATAGGCTAAGATACAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTCTTGGAGTTAGTAATGCTTTAATAGGCTAAGATACAGGGA  50

seq1  GCTGGGCTGCCCAGGCCCCATACGGTGGCCATGTGTGTCTATTTCCTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTGCCCAGGCCCCATACGGTGGCCATGTGTGTCTATTTCCTAGT  100

seq1  GTCTGGACTGGAGTTTTGGCATATACCTTTAGGACCAATGAAATAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGACTGGAGTTTTGGCATATACCTTTAGGACCAATGAAATAGCTGA  150

seq1  TGACACATAGCTTCCAGGCAGCTGTGCAAAGAAAGATAAAAATGCAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACATAGCTTCCAGGCAGCTGTGCAAAGAAAGATAAAAATGCAAAAT  200

seq1  GAGAATAGGGACCAGCACTGCCTAAGCATGCTGGCCTCTGGCCGAGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAGGGACCAGCACTGCCTAAGCATGCTGGCCTCTGGCCGAGACCT  250

seq1  GTCCATTTTCAAAGTCCCAGCCTTGCTGCCTGAAGACTTTCCTCCCTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTTCAAAGTCCCAGCCTTGCTGCCTGAAGACTTTCCTCCCTCTA  300

seq1  TGCTCATCAATAAGTTGCTAACACTGAAACAACTTAAGTGTCCTCTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATCAATAAGTTGCTAACACTGAAACAACTTAAGTGTCCTCTTAGA  350

seq1  GGCTTAGATAAAGAGAATATGGTAGATCCATGAAATAAACCATTAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGATAAAGAGAATATGGTAGATCCATGAAATAAACCATTAACTTA  400

seq1  CAATAAGAATGAGGGTTGTCACCTGCTTGAGCATGTCATGTGAACCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAGAATGAGGGTTGTCACCTGCTTGAGCATGTCATGTGAACCTTTA  450

seq1  ATACAGTGTAACTTAGGAAAGGAACCAGACACAGAAGCCTACATGCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGTAACTTAGGAAAGGAACCAGACACAGAAGCCTACATGCTTAT  500

seq1  GAGTTCACTTCTCTGAATCATCTAAGCAAATCTGTAGAGACACACAGACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCACTTCTCTGAATCATCTAAGCAAATCTGTAGAGACACACAGACT  550

seq1  AATGATATCAAAGGTTGCCGTACTGAAAAGGGATTGTCCATGCTTATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATCAAAGGTTGCCGTACTGAAAAGGGATTGTCCATGCTTATGGT  600

seq1  GTTTCTGCAGTGTTAAAGAATGTTCTGAAGTTAGGTACTCATGATAGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCAGTGTTAAAGAATGTTCTGAAGTTAGGTACTCATGATAGTTA  650

seq1  CACTGCCTTATGAATACAGTAGAAGTTATTGGATATGCCTTTTGTTTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTTATGAATACAGTAGAAGTTATTGGATATGCCTTTTGTTTTAA  700

seq1  GGTTGGTTTGCTTGTTTACATGCCCACCTACTTATTTATTGTGTGGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTTTGCTTGTTTACATGCCCACCTACTTATTTATTGTGTGGTGGG  750

seq1  GTGCTTGTGCATAGGTAAAGACCAGAAGAAGCCACAGTTTGTC-TTCTGA  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTGCTTGTGCATAGGTAAAGACCAGAAGAAGCCACAGTTTGTCTTTCTGA  800

seq1  CACTCTCCACATGTTCC-TTTGTGACAGAATC-TTCTCCCTACACCTT--  845
      ||||||||||||||||| |||||||||||||| |||||||||||||||  
seq2  CACTCTCCACATGTTCCTTTTGTGACAGAATCTTTCTCCCTACACCTTTG  850

seq1  GTGTTTCTGGTTTTCTCAG-CCATGCCCCAGAAAT-CCACCTG-CCTCAG  892
       |||||||||||||||||| ||||||||||||||| ||||||| ||||||
seq2  TTGTTTCTGGTTTTCTCAGCCCATGCCCCAGAAATCCCACCTGCCCTCAG  900

seq1  CTCCCCTCAGAGCTGGGGGTTATAGG-TGTG-TGAAGAGGCCAAGCTTGT  940
      |||||||||||||||||||||||||| |||| ||||||||||||||||||
seq2  CTCCCCTCAGAGCTGGGGGTTATAGGTTGTGTTGAAGAGGCCAAGCTTGT  950

seq1  GTGG-TTGCTGGGACCCAAGG-TCCAGGCCTCACGATGCACATGTGCCC-  987
      |||| |||||||||||| ||| ||||||||||||||||||||||||||| 
seq2  GTGGTTTGCTGGGACCCCAGGTTCCAGGCCTCACGATGCACATGTGCCCT  1000

seq1  -TTCACTGCTGCCACG-TTTCGAGTTTCCGGTC-TCTGGTTTTTGAGACA  1034
       ||||||||||||||| |||||||||||||||| ||||| ||||||||  
seq2  TTTCACTGCTGCCACGTTTTCGAGTTTCCGGTCTTCTGGGTTTTGAGAAC  1050

seq1  GAAGTTCTA-TGTGTTG-TCCAGGTGGCCTAGAACTCATTCTTTAGCGCA  1082
      |||| |||| ||||||| ||||||||| |||| ||||| |||||||||||
seq2  GAAG-TCTATTGTGTTGTTCCAGGTGG-CTAG-ACTCA-TCTTTAGCGCA  1096

seq1  GGGTGACCTCAGACG-TGCAGTAATCCTTTC-TTCTTTCCTC  1122
        | |||||| |||| ||||||||| ||||| ||||||||||
seq2  -AGAGACCTC-GACGTTGCAGTAATTCTTTCTTTCTTTCCTC  1136