BAC Information

Click to search

BAC

Clone NameB6Ng01-184I23
Chromosome13 (Build37)
Map Location 80,506,291 - 80,507,440
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184I23.bB6Ng01-184I23.g
ACCGA009905GA009906
length7191,155
definitionB6Ng01-184I23.b B6Ng01-184I23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaggagaagaaactcaaatggctgagaaaaatgtaaatgctca
acatccttagccatcagggaaatgcaaatcaaaactacttttagatttcc
tcttatacatgttagaatgtctataacacaagccttggtggcaaaggtat
ggagcaaggagattacttctccagttccagtaggagtactacctagtaca
gtcactatagaaatcagtaggatgactcttcataaatttgggatttgatc
tacctcaacattcagttatactactgttgggcatagattcaaatgacatt
tcatctgacaaaaagaacattttctcaacctgttgaagcttgttttatgt
ccagttatatgttcaactttggagaaggttctatgaggtgttgaggaggt
tcttttggtttagggtgaatagttatgtaggtatatgttaaatccatttt
ttttataataacttctaatttcactgtgtctctgtttagtttctgtctca
ataactggtgcattggtggggtattgaagtcttccactattattgtgtga
cgtgcaatgtgtgttttgagtattagtaaagtgtattttgtgaatgtagg
tgtcctttcatttgaggcatagatggtcagaattgagatttcatcttgtt
ggatttttccttttgatgactatgtagtgtcgttcaccatttcttctatt
gcttttgggttgaaaagtc

gaattcagtcagtgcagtttggggatttgagttgggagttagtgtagcaa
gcacagcgaagtggagttgagtttctttgggagttcatgcagttcagagc
aggtcagcagaggcagctgaaaccagagaataagaaggagccagaagact
ataatgaattgccagagttagtttgaggtcaagcagagctttcattgagg
agttgagagaaccagattgaatcagtcagcatggggaggaatttgatcca
gaacaactgagttgaatcagccagttaagagttcagaaaggactagaaag
ggtgatcttatttagcaggaagtctcacagatgacaattatatcagacaa
ttaaaaatacttttacagtctggcagagatgaagcaagtgagtagtcttg
tgaggaagtagaaaaaccaataggtaagatagtagacaaaaatcatttac
tttcccttagacattcttacctgaagatgtgttcatcttttttaatagtt
taataaaatgtggttatgactgttaagtttggggatataaggcttttaaa
attaattggcttttttttctacacacttttcttaataagagaatattttc
aaagaaatttagcctcattaagttcttctttggacatcagtagtctttag
attcaaatgttttccaattaagtctgcagtccagtaatgaaccttcaacc
taacctatcaagtgatatgaacatttaggttgttgtcaatattacttcta
atttgactcttaactagtatatattttaagcagttttcacacacacacac
acacacacacacacacacacaaatatagcttttgaaaaaaattcataaat
aactatttccattgtgaattcattttgacaacagcaggattcaccataat
ccatttttgtgaactagggttcagaaacagagcaataggcaatgaagaag
tgctaaaaggacggtctcagacataaccaaggtcctaagattctggtaat
ttaggaagaagttaccttgattctttttcttgcaggggtggcttatttcg
agaaagtggatgagttaaaacacctttgcaaaggttgtttaatgtctgga
gtataaatagaagcaatcctcctagtttctagaattgcaagtcaattgta
acttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80506291_80507440
seq2: B6Ng01-184I23.g_64_1218 (reverse)

seq1  AAAGTTTACATTGATTTGC-ATTCTAGAAATTAGGAAGATTTGCTTCTAT  49
      ||||||   ||||| |||| |||||||||| ||||| || ||||||||||
seq2  AAAGTTACAATTGACTTGCAATTCTAGAAACTAGGAGGA-TTGCTTCTAT  49

seq1  TTATTACTTCAGACATTAAAC-ACCTTTCCAAAAGGTG-TTTAACTCATC  97
      ||| |||| |||||||||||| |||||| | ||||||| |||||||||||
seq2  TTA-TACTCCAGACATTAAACAACCTTTGC-AAAGGTGTTTTAACTCATC  97

seq1  ACCTTTCT-GAAAT-AGCCACCCCCTGCAAG-AAAAGAATCAAGGTAACT  144
        |||||| ||||| ||||| |||||||||| ||||||||||||||||||
seq2  CACTTTCTCGAAATAAGCCA-CCCCTGCAAGAAAAAGAATCAAGGTAACT  146

seq1  TCTTCCCTAAATTACCAGAATC-TAGGACC-TGGTTATGTCTGAGACCCT  192
      |||| ||||||||||||||||| ||||||| ||||||||||||||||| |
seq2  TCTT-CCTAAATTACCAGAATCTTAGGACCTTGGTTATGTCTGAGACCGT  195

seq1  TCTTTTAGCAC-TCTTCATTGCCTA-TGCTCTGTTTCTGAACCCTAGTTC  240
       |||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CCTTTTAGCACTTCTTCATTGCCTATTGCTCTGTTTCTGAACCCTAGTTC  245

seq1  ACAAAAATGGATTATGGTGAATCCTGCTGTTGTCAAAATGAATTCACAAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATGGATTATGGTGAATCCTGCTGTTGTCAAAATGAATTCACAAT  295

seq1  GGAAATAGTTATTTATGAATTTTTTTCAAAAGCTATATTTGTGTGTGTGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGTTATTTATGAATTTTTTTCAAAAGCTATATTTGTGTGTGTGT  345

seq1  GTGTGTGTGTGTGTGTGTGTGTGAAAACTGCTTAAAATATATACTAGTTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGAAAACTGCTTAAAATATATACTAGTTA  395

seq1  AGAGTCAAATTAGAAGTAATATTGACAACAACCTAAATGTTCATATCACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAAATTAGAAGTAATATTGACAACAACCTAAATGTTCATATCACT  445

seq1  TGATAGGTTAGGTTGAAGGTTCATTACTGGACTGCAGACTTAATTGGAAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGTTAGGTTGAAGGTTCATTACTGGACTGCAGACTTAATTGGAAA  495

seq1  ACATTTGAATCTAAAGACTACTGATGTCCAAAGAAGAACTTAATGAGGCT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAATCTAAAGACTACTGATGTCCAAAGAAGAACTTAATGAGGCT  545

seq1  AAATTTCTTTGAAAATATTCTCTTATTAAGAAAAGTGTGTAGAAAAAAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTTGAAAATATTCTCTTATTAAGAAAAGTGTGTAGAAAAAAAA  595

seq1  GCCAATTAATTTTAAAAGCCTTATATCCCCAAACTTAACAGTCATAACCA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATTAATTTTAAAAGCCTTATATCCCCAAACTTAACAGTCATAACCA  645

seq1  CATTTTATTAAACTATTAAAAAAGATGAACACATCTTCAGGTAAGAATGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTAAACTATTAAAAAAGATGAACACATCTTCAGGTAAGAATGT  695

seq1  CTAAGGGAAAGTAAATGATTTTTGTCTACTATCTTACCTATTGGTTTTTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGAAAGTAAATGATTTTTGTCTACTATCTTACCTATTGGTTTTTC  745

seq1  TACTTCCTCACAAGACTACTCACTTGCTTCATCTCTGCCAGACTGTAAAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTCACAAGACTACTCACTTGCTTCATCTCTGCCAGACTGTAAAA  795

seq1  GTATTTTTAATTGTCTGATATAATTGTCATCTGTGAGACTTCCTGCTAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTTAATTGTCTGATATAATTGTCATCTGTGAGACTTCCTGCTAAA  845

seq1  TAAGATCACCCTTTCTAGTCCTTTCTGAACTCTTAACTGGCTGATTCAAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCACCCTTTCTAGTCCTTTCTGAACTCTTAACTGGCTGATTCAAC  895

seq1  TCAGTTGTTCTGGATCAAATTCCTCCCCATGCTGACTGATTCAATCTGGT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTGTTCTGGATCAAATTCCTCCCCATGCTGACTGATTCAATCTGGT  945

seq1  TCTCTCAACTCCTCAATGAAAGCTCTGCTTGACCTCAAACTAACTCTGGC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAACTCCTCAATGAAAGCTCTGCTTGACCTCAAACTAACTCTGGC  995

seq1  AATTCATTATAGTCTTCTGGCTCCTTCTTATTCTCTGGTTTCAGCTGCCT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTATAGTCTTCTGGCTCCTTCTTATTCTCTGGTTTCAGCTGCCT  1045

seq1  CTGCTGACCTGCTCTGAACTGCATGAACTCCCAAAGAAACTCAACTCCAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGACCTGCTCTGAACTGCATGAACTCCCAAAGAAACTCAACTCCAC  1095

seq1  TTCGCTGTGCTTGCTACACTAACTCCCAACTCAAATCCCCAAACTGCACT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCTGTGCTTGCTACACTAACTCCCAACTCAAATCCCCAAACTGCACT  1145

seq1  GACTGAATTC  1150
      ||||||||||
seq2  GACTGAATTC  1155


| Home | SequenceCutter | Blast | Download |