BAC Information

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BAC

Clone NameB6Ng01-186E07
Chromosome13 (Build37)
Map Location 94,406,886 - 94,530,011
singlet/doubletdoublet
Overlap geneBhmt, Bhmt2, Dmgdh
Upstream geneSerinc5, Ppia-ps13_1124.1, Thbs4, EG624619, EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883
Downstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186E07.bB6Ng01-186E07.g
ACCGA011156GA011157
length1,1331,105
definitionB6Ng01-186E07.b B6Ng01-186E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,528,971 - 94,530,011)(94,406,886 - 94,407,992)
sequence
gaattcagttcccagcactgacgttgggtaactcacaaatgcctctaact
ccacttgcatgtgattcagcgctctcttctggcttcataggcacctgcac
acaggtggcatacactcacatagacacacacgcataaataaacgaaaata
aattaatctttaacaatttgaaaaagagactgaatttgaaatatatttaa
aatcagtgagatatttcacatacaaccctaccattttctcttactgtaca
cactgaagctcatctgcctactattttatgatacacgtaagcatatagaa
acttcagttgcatagaacagaatcaaaaaaaaaatctcaccttctgtctc
tttatatttataaccctctgttctattggtatttctgatttggtctttaa
acataggctagctagatcgatagggtttgaagacacagactcagcctgat
aaaaatccgagtgattccagcagcaaaaactcactgtaaaaatgactttc
atggctctgtgactattaagagcccatgagaaaaccgtagctctccaaac
cacctccataaacagtgcactgctcattaagatgtaagaaatagtttgtc
atactggtaaagagctgtcatcccagctgagatgctgggaaataaaccaa
agcttctctgggctataaaatgagaccaggtctcaaaaatacgtcaaggg
gcctgggaggtggccagttgtaaactgtgcaagcctgaggacctgagtcc
tgatccaagtattcacatgaaagccatgcgtgcccaggcagtggtggcac
acgcctttttaaatctcagctcaggagacagaggcagtcagatctctgag
ttcaaggccagcatggtttacatagcaagttccaagacagccagggctac
acagagaccctatcttgaaaaacccaaacccaaaccaaccaaccaaccac
acacacacacacacacacacatgcacacacacaaccactttgcttaacac
agggattttttcagcctttaattttacttggtgtctctgttcctctgaaa
tgatcgtatggatgtgtacagttagagcccagagctttaacgaagcagga
caagaagcatttagctacttcgcacgttctcgc
gaattctgtgaacagtccttcctcagcgtcttaaaaccattctacttatt
tgtttctgaaaccgtaaggcaatcgggccggctctgcagctgcctgcccc
tcctgcacccggcaagccaccagccagagccaactcccactgtgggaaat
tgcacccctggatccatgagcagcttctctgggatatttctctggtcttt
aggggtgctgcactcatgaagggttgagtctgatgggctgaagggagcac
cctgacatccaaagtggctgtcttgtgccttgtgtcactccacagatagg
tccaaggtggagccagaagtgcaggagggccagagaccatatagaataca
ctattgttagaagaaacccccagtcagaactcaaagttctgagtgcccct
tttgacctaacactgccaactagaaggatgctgggccacagccaggctcc
aagcacctctctgcgcttgctgacattgggggtacccagctgatggtgta
ttgagagctctctccggctccctgcacactcaccttcttggccttcttgc
cagcaactggtgccatctttccggtgtagtgagtggcgctgaacacagct
gcggattggagggtagctgttcccagcaaagtctgtgctgctgggccgct
gctggtctctttatacagcagctagagttccctagccttggccaggtcca
acacatggcctcaggcagggaacacgcccaccagcctttgaattaggcca
ggggctagctgggaagctgcctgtgggaggagaagtcgagattggtctcc
tagatgggtggaaacgcgaagttaagataagaaaaaaatactgaggtcgc
tgctagctcgtctgcacactgacctttgtccaatagcaggcctctgacct
tgatctggggtcaggtatccatgacccacttaagctgccagaccataccc
ccaagaattccactcagtgaccaaatatttgacaaggcgaagatacaaga
tcattgcatgaggatgcgatgccggcaagaacttggcacagagtgtaaac
tggcatgaactacattctgcaccagttaactacttgccttttgcagaagc
gctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_94528971_94530011
seq2: B6Ng01-186E07.b_137_1174 (reverse)

seq1  GCGAGAACGTGCGAAGTAGCTTAATGC-TCTTGTCCTGCTCTGTTAAAGC  49
      ||||||||||||||||||||| ||||| ||||||||||||  ||||||||
seq2  GCGAGAACGTGCGAAGTAGCTAAATGCTTCTTGTCCTGCTTCGTTAAAGC  50

seq1  TTCCTGGGCTCTAACTGTACACATCCATACGATTCATTTCAGAAGGAACA  99
      |  ||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  T--CTGGGCTCTAACTGTACACATCCATACGA-TCATTTCAG-AGGAACA  96

seq1  GAGACACCAAGTAAAATTAAAGGCTGAAAAAATCCCTGTGTTAAGCAAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACCAAGTAAAATTAAAGGCTGAAAAAATCCCTGTGTTAAGCAAAG  146

seq1  TGGTTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGGTTGGTTGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGGTTGGTTGGT  196

seq1  TGGTTTGGGTTTGGGTTTTTCAAGATAGGGTCTCTGTGTAGCCCTGGCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGGTTTGGGTTTTTCAAGATAGGGTCTCTGTGTAGCCCTGGCTG  246

seq1  TCTTGGAACTTGCTATGTAAACCATGCTGGCCTTGAACTCAGAGATCTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGAACTTGCTATGTAAACCATGCTGGCCTTGAACTCAGAGATCTGA  296

seq1  CTGCCTCTGTCTCCTGAGCTGAGATTTAAAAAGGCGTGTGCCACCACTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGTCTCCTGAGCTGAGATTTAAAAAGGCGTGTGCCACCACTGC  346

seq1  CTGGGCACGCATGGCTTTCATGTGAATACTTGGATCAGGACTCAGGTCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACGCATGGCTTTCATGTGAATACTTGGATCAGGACTCAGGTCCT  396

seq1  CAGGCTTGCACAGTTTACAACTGGCCACCTCCCAGGCCCCTTGACGTATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTGCACAGTTTACAACTGGCCACCTCCCAGGCCCCTTGACGTATT  446

seq1  TTTGAGACCTGGTCTCATTTTATAGCCCAGAGAAGCTTTGGTTTATTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACCTGGTCTCATTTTATAGCCCAGAGAAGCTTTGGTTTATTTCC  496

seq1  CAGCATCTCAGCTGGGATGACAGCTCTTTACCAGTATGACAAACTATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCTCAGCTGGGATGACAGCTCTTTACCAGTATGACAAACTATTTC  546

seq1  TTACATCTTAATGAGCAGTGCACTGTTTATGGAGGTGGTTTGGAGAGCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCTTAATGAGCAGTGCACTGTTTATGGAGGTGGTTTGGAGAGCTA  596

seq1  CGGTTTTCTCATGGGCTCTTAATAGTCACAGAGCCATGAAAGTCATTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTTTCTCATGGGCTCTTAATAGTCACAGAGCCATGAAAGTCATTTTT  646

seq1  ACAGTGAGTTTTTGCTGCTGGAATCACTCGGATTTTTATCAGGCTGAGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAGTTTTTGCTGCTGGAATCACTCGGATTTTTATCAGGCTGAGTC  696

seq1  TGTGTCTTCAAACCCTATCGATCTAGCTAGCCTATGTTTAAAGACCAAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCAAACCCTATCGATCTAGCTAGCCTATGTTTAAAGACCAAAT  746

seq1  CAGAAATACCAATAGAACAGAGGGTTATAAATATAAAGAGACAGAAGGTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATACCAATAGAACAGAGGGTTATAAATATAAAGAGACAGAAGGTG  796

seq1  AGATTTTTTTTTTGATTCTGTTCTATGCAACTGAAGTTTCTATATGCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTTTTTTTGATTCTGTTCTATGCAACTGAAGTTTCTATATGCTTA  846

seq1  CGTGTATCATAAAATAGTAGGCAGATGAGCTTCAGTGTGTACAGTAAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTATCATAAAATAGTAGGCAGATGAGCTTCAGTGTGTACAGTAAGAG  896

seq1  AAAATGGTAGGGTTGTATGTGAAATATCTCACTGATTTTAAATATATTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTAGGGTTGTATGTGAAATATCTCACTGATTTTAAATATATTTC  946

seq1  AAATTCAGTCTCTTTTTCAAATTGTTAAAGATTAATTTATTTTCGTTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGTCTCTTTTTCAAATTGTTAAAGATTAATTTATTTTCGTTTAT  996

seq1  TTATGCGTGTGTGTCTATGTGAGTGTATGCCACCTGTGTGCA  1041
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCGTGTGTGTCTATGTGAGTGTATGCCACCTGTGTGCA  1038

seq1: chr13_94406886_94407992
seq2: B6Ng01-186E07.g_65_1169

seq1  GAATTCTGTGAACAGTCCTTCCTCAGCGTCTTAAAACCATTCTACTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAACAGTCCTTCCTCAGCGTCTTAAAACCATTCTACTTATT  50

seq1  TGTTTCTGAAACCGTAAGGCAATCGGGCCGGCTCTGCAGCTGCCTGCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTGAAACCGTAAGGCAATCGGGCCGGCTCTGCAGCTGCCTGCCCC  100

seq1  TCCTGCACCCGGCAAGCCACCAGCCAGAGCCAACTCCCACTGTGGGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCACCCGGCAAGCCACCAGCCAGAGCCAACTCCCACTGTGGGAAAT  150

seq1  TGCACCCCTGGATCCATGAGCAGCTTCTCTGGGATATTTCTCTGGTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCCCTGGATCCATGAGCAGCTTCTCTGGGATATTTCTCTGGTCTTT  200

seq1  AGGGGTGCTGCACTCATGAAGGGTTGAGTCTGATGGGCTGAAGGGAGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCTGCACTCATGAAGGGTTGAGTCTGATGGGCTGAAGGGAGCAC  250

seq1  CCTGACATCCAAAGTGGCTGTCTTGTGCCTTGTGTCACTCCACAGATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATCCAAAGTGGCTGTCTTGTGCCTTGTGTCACTCCACAGATAGG  300

seq1  TCCAAGGTGGAGCCAGAAGTGCAGGAGGGCCAGAGACCATATAGAATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGTGGAGCCAGAAGTGCAGGAGGGCCAGAGACCATATAGAATACA  350

seq1  CTATTGTTAGAAGAAACCCCCAGTCAGAACTCAAAGTTCTGAGTGCCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTAGAAGAAACCCCCAGTCAGAACTCAAAGTTCTGAGTGCCCCT  400

seq1  TTTGACCTAACACTGCCAACTAGAAGGATGCTGGGCCACAGCCAGGCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTAACACTGCCAACTAGAAGGATGCTGGGCCACAGCCAGGCTCC  450

seq1  AAGCACCTCTCTGCGCTTGCTGACATTGGGGGTACCCAGCTGATGGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTCTCTGCGCTTGCTGACATTGGGGGTACCCAGCTGATGGTGTA  500

seq1  TTGAGAGCTCTCTCCGGCTCCCTGCACACTCACCTTCTTGGCCTTCTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCTCTCTCCGGCTCCCTGCACACTCACCTTCTTGGCCTTCTTGC  550

seq1  CAGCAACTGGTGCCATCTTTCCGGTGTAGTGAGTGGCGCTGAACACAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACTGGTGCCATCTTTCCGGTGTAGTGAGTGGCGCTGAACACAGCT  600

seq1  GCGGATTGGAGGGTAGCTGTTCCCAGCAAAGTCTGTGCTGCTGGGCCGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTGGAGGGTAGCTGTTCCCAGCAAAGTCTGTGCTGCTGGGCCGCT  650

seq1  GCTGGTCTCTTTATACAGCAGCTAGAGTTCCCTAGCCTTGGCCAGGTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCTCTTTATACAGCAGCTAGAGTTCCCTAGCCTTGGCCAGGTCCA  700

seq1  ACACATGGCCTCAGGCAGGGAACACGCCCACCAGCCTTTGAATTAGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGCCTCAGGCAGGGAACACGCCCACCAGCCTTTGAATTAGGCCA  750

seq1  GGGGCTAGCTGGGAAGCTGCCTGTGGGAGGAGAAGTCGAGATTGGTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTAGCTGGGAAGCTGCCTGTGGGAGGAGAAGTCGAGATTGGTCTCC  800

seq1  TAGATGGGTGGAAACGCGAAGTTAAGATAAGAAAAAAATACTGAGGTCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGGGTGGAAACGCGAAGTTAAGATAAGAAAAAAATACTGAGGTCGC  850

seq1  TGCTAGCTCGTCTGCACACTGACCTTTGTCCAATAGCAGGCCTCTGACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTCGTCTGCACACTGACCTTTGTCCAATAGCAGGCCTCTGACCT  900

seq1  TGATCTGGGGTCAGGTATCCATGACCCACTTAAGCTGCCAGACCATACCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGGGTCAGGTATCCATGACCCACTTAAGCTGCCAGACCATACCC  950

seq1  CCAAGAATTCCACTCAGTGACCAAATATTTGACAAAGGCGAAGATACAAG  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCAAGAATTCCACTCAGTGACCAAATATTTGAC-AAGGCGAAGATACAAG  999

seq1  ATCATTGCATGAGGATGCGATGCCCGGCAAGAACTTGGCACAGAGTGTAA  1050
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATCATTGCATGAGGATGCGATG-CCGGCAAGAACTTGGCACAGAGTGTAA  1048

seq1  ACT-GCATGACCTACATCTGGCACAAGTAACATAACTTGCCCTTTGCAGA  1099
      ||| |||||| ||||||   |||| ||| | |  ||||||| ||||||||
seq2  ACTGGCATGAACTACATTCTGCACCAGTTA-ACTACTTGCCTTTTGCAGA  1097

seq1  AGCGCTCA  1107
      ||||||||
seq2  AGCGCTCA  1105