BAC Information

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BAC

Clone NameB6Ng01-187B09
Chromosome13 (Build37)
Map Location 45,467,880 - 45,469,044
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533
Downstream geneMylip, Gmpr, Atxn1, 5033430I15Rik, ENSMUSG00000062282, Gm1574
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187B09.bB6Ng01-187B09.g
ACCGA011757GA011758
length1,185855
definitionB6Ng01-187B09.b B6Ng01-187B09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactttagctctctccaacttggagttagaggaggggtaaagc
atcagatggaggagtgtgggttagcagctcagcacagggagaggagcatg
tctggaggtgtgcggcactcaaaggcagctgtgttctggagcagaagttg
atgttctgggcccttctctgagaacaggcaggatactgctgccatggtaa
gaagatgggagtcaagcctaggtataaaaggaattgagatttcaccagga
ggaagaggtccacaccaactgtacacaacctcttctaggaaataccaaaa
aaagagagcttgcttcctggctcatcccgagaccagtattacccaaacca
gataaatgtcagaaaagccaactgtcacttggctttatctgtgtgtaaaa
ggtctgtttatatttgttttgaatattcttttttgttgtttttgataccc
actccccctctttatatcatcagaacagtttttttttccagtcacattga
ttcatatctataattccaggtgaggtggaaaggaattgcaagttaaaagc
tacactgagctacatgatcctgtctgggatcaaaaaaatgtcataagcaa
acaaaagcaacagcgatgaaacaccttattcgtgtcttctacaatgtcat
cccctccccatttactttgagctagtggcaaaagagaggcaggctcttcc
catcctggccttctatgttgccgtgcagctgagcagagctggcaggaagg
aagcttgcattctctacgcaattctttgtaatcataaaagattgctttta
atttgagcatccagtgtagattcacatcagagacatttgtaacatatatt
tatagactaaagaggtttagaaaactgtaagatttatactttaaggctta
tctcattataattttgctctttatgaaatatttccttccagctgggcaca
gtggcaacatgccctgtaatcccagcactaagcagggtataaactaaggg
accaatctgggccacatccgtatgataggaccttacccttaacacaacac
acatactgccacagcacgacgatacgaccgacacatccacgaaccataca
taatacccatgtatttcaccatatacacacacatgtatttcacatataaa
ccataggctaaatacgcggaactactttatacatg

gaattcctctttccctacatatacgttttctctgtgttagcttttctggc
tggggcaagtcagaatttcaaagcagttttaagatgcatttatctgttgg
ttaaggaatttgaaaccttactcaagtgtatattggttatctgtttttat
ttccttttaagaactgtctatttggttcattagtctattgactaaaagac
tgggggtggggagggtcaggtatttaacttttgggttctttacatattat
agatattaatccctcattgatgtgtggtttagtgaacagttttcccctcc
tgtaggctgtctctcttcaccatagtagttgttccctttgccgtgcagga
aattcttaatttcatgtcctcaaaactgccaactcttgagagaacctcct
gtgctggtggagttctttgcagaagcctctgacagcacctttgtcctgac
gtgttccagttgtgtttccagctttgcctctctctagcagtttcaaatgg
atccataaggtcattgatccattttttaatttctttgggggcatagtaag
atatatggatctagctttgcccttcaacatgcagacatccagttttatca
attttctcaaaggatccaagagtctctcttttctctgaattccaacatta
ggtgatttaagctgtgagcatttatttcagaatcttccattctagtttac
tggttgatgtgtctgtttctgtgcgagcaccatgctaagttgttgttgtc
gttgttgttttgtggctctatgatacactttgagatgaggaatggtatta
tgctacgaatcagtactgcttattctgacagaagagttaatttagtggtt
ttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_45467880_45469044
seq2: B6Ng01-187B09.b_49_1233

seq1  GAATTCAAACTTTAGCTCTCTCCAACTTGGAGTTAGAGGAGGGGTAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTTAGCTCTCTCCAACTTGGAGTTAGAGGAGGGGTAAAGC  50

seq1  ATCAGATGGAGGAGTGTGGGTTAGCAGCTCAGCACAGGGAGAGGAGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGATGGAGGAGTGTGGGTTAGCAGCTCAGCACAGGGAGAGGAGCATG  100

seq1  TCTGGAGGTGTGCGGCACTCAAAGGCAGCTGTGTTCTGGAGCAGAAGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGTGTGCGGCACTCAAAGGCAGCTGTGTTCTGGAGCAGAAGTTG  150

seq1  ATGTTCTGGGCCCTTCTCTGAGAACAGGCAGGATACTGCTGCCATGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGGGCCCTTCTCTGAGAACAGGCAGGATACTGCTGCCATGGTAA  200

seq1  GAAGATGGGAGTCAAGCCTAGGTATAAAAGGAATTGAGATTTCACCAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGGAGTCAAGCCTAGGTATAAAAGGAATTGAGATTTCACCAGGA  250

seq1  GGAAGAGGTCCACACCAACTGTACACAACCTCTTCTAGGAAATACCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGGTCCACACCAACTGTACACAACCTCTTCTAGGAAATACCAAAA  300

seq1  AAAGAGAGCTTGCTTCCTGGCTCATCCCGAGACCAGTATTACCCAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAGCTTGCTTCCTGGCTCATCCCGAGACCAGTATTACCCAAACCA  350

seq1  GATAAATGTCAGAAAAGCCAACTGTCACTTGGCTTTATCTGTGTGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGTCAGAAAAGCCAACTGTCACTTGGCTTTATCTGTGTGTAAAA  400

seq1  GGTCTGTTTATATTTGTTTTGAATATTCTTTTTTGTTGTTTTTGATACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTTATATTTGTTTTGAATATTCTTTTTTGTTGTTTTTGATACCC  450

seq1  ACTCCCCCTCTTTATATCATCAGAACAGTTTTTTTTTCCAGTCACATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCTCTTTATATCATCAGAACAGTTTTTTTTTCCAGTCACATTGA  500

seq1  TTCATATCTATAATTCCAGGTGAGGTGGAAAGGAATTGCAAGTTAAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATCTATAATTCCAGGTGAGGTGGAAAGGAATTGCAAGTTAAAAGC  550

seq1  TACACTGAGCTACATGATCCTGTCTGGGATCAAAAAAATGTCATAAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGAGCTACATGATCCTGTCTGGGATCAAAAAAATGTCATAAGCAA  600

seq1  ACAAAAGCAACAGCGATGAAACACCTTATTCGTGTCTTCTACAATGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCAACAGCGATGAAACACCTTATTCGTGTCTTCTACAATGTCAT  650

seq1  CCCCTCCCCATTTACTTTGAGCTAGTGGCAAAAGAGAGGCAGGCTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCATTTACTTTGAGCTAGTGGCAAAAGAGAGGCAGGCTCTTCC  700

seq1  CATCCTGGCCTTCTATGTTGCCGTGCAGCTGAGCAGAGCTGGCAGGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGGCCTTCTATGTTGCCGTGCAGCTGAGCAGAGCTGGCAGGAAGG  750

seq1  AAGCTTGCATTCTCTACGCAATTCTTTGTAATCATAAAAGATTGCTTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGCATTCTCTACGCAATTCTTTGTAATCATAAAAGATTGCTTTTA  800

seq1  ATTTGAGCATCCAGTGTAGATTCACATCAGAGACA-TTGTAACATATATT  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTTGAGCATCCAGTGTAGATTCACATCAGAGACATTTGTAACATATATT  850

seq1  TATAGACTAAAGAGGTTTAGAAAACTGTAAGATTTATACTTTAAGGCTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACTAAAGAGGTTTAGAAAACTGTAAGATTTATACTTTAAGGCTTA  900

seq1  TCTCATTATAA-TTTGCTCTTTATGAAATA-TTCCTTCCAGCTGGGCACA  947
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TCTCATTATAATTTTGCTCTTTATGAAATATTTCCTTCCAGCTGGGCACA  950

seq1  GTGGC-ACATG-CCTGTAATCCCAGCACTAAGCAGGGTAT-AACT-AGGG  993
      ||||| ||||| |||||||||||||||||||||||||||| |||| ||||
seq2  GTGGCAACATGCCCTGTAATCCCAGCACTAAGCAGGGTATAAACTAAGGG  1000

seq1  ACCAATCTGGGCCACA-CCGTATGATAGGACCCTACCTTTAACAC-ACAC  1041
      |||||||||||||||| ||||||||||||||| |||| ||||||| ||||
seq2  ACCAATCTGGGCCACATCCGTATGATAGGACCTTACCCTTAACACAACAC  1050

seq1  ACATAC-ACCACA-CAC-AC-ATAC-AC--ACACACACAC-AAACATACA  1083
      ||||||  ||||| ||| || |||| ||  |||||  ||| || ||||||
seq2  ACATACTGCCACAGCACGACGATACGACCGACACATCCACGAACCATACA  1100

seq1  T-ATACACATGTA-TTCA-CATATACACACACATGTA-TTCACATATACA  1129
      | |||| |||||| |||| |||||||||||||||||| |||||||||| |
seq2  TAATACCCATGTATTTCACCATATACACACACATGTATTTCACATATAAA  1150

seq1  CACATAGGCATAAATACGCAGACATAC-TTATACATG  1165
      | ||||||| ||||||||| ||  ||| |||||||||
seq2  C-CATAGGC-TAAATACGCGGAACTACTTTATACATG  1185


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