MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-189I03
Chromosome	13 (Build37)
Map Location	11,296,719 - 11,297,903
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Chrm3
Downstream gene	LOC100039648, Zp4, Ryr2, LOC100039678, Mtr
Link	Open Mouse BAC browser

Click to get alignment info.

name	Chrm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12671 MGI:88398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039648 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	Zp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664793 MGI:3690088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ryr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20191 MGI:99685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Mtr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238505 MGI:894292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chrm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227208 GeneID:12671 MGI:88398
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cholinergic receptor, muscarinic 3, cardiac transcript_id : NM_033269.3

name	Zp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263870 GeneID:664793 MGI:3690088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : zona pellucida glycoprotein 4 transcript_id : XM_001481274.1

name	Ryr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430577 GeneID:20191 MGI:99685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ryanodine receptor 2, cardiac transcript_id : NM_023868.2

name	Mtr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487478 GeneID:238505 MGI:894292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-methyltetrahydrofolate-homocysteine methyltransferase transcript_id : NM_001081128.1

name	Zp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263871 GeneID:664793 MGI:3690088
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : zona pellucida glycoprotein 4 protein_id : XP_001481324.1 transl_except : (pos:11614445..11614447,aa:OTHER) transl_except : (pos:11614478..11614480,aa:OTHER) transl_except : (pos:11615001..11615003,aa:OTHER) transl_except : (pos:11615025..11615027,aa:OTHER) transl_except : (pos:11615987..11615989,aa:OTHER) transl_except : (pos:11618261..11618263,aa:OTHER) transl_except : (pos:11618802..11618804,aa:OTHER) transl_except : (pos:11620619..11620621,aa:OTHER) transl_except : (pos:11620640..11620642,aa:OTHER) transl_except : (pos:11620673..11620675,aa:OTHER) transl_except : (pos:11620682..11620684,aa:OTHER) transl_except : (pos:11620697..11620699,aa:OTHER)

name	Ryr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430578 GeneID:20191 MGI:99685
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005219 - ryanodine-sensitive calcium-release channel activity [Evidence IDA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IEA]; GO:0006816 - calcium ion transport [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0031000 - response to caffeine [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ryanodine receptor type 2; calcium release channel product : ryanodine receptor 2, cardiac protein_id : NP_076357.2

name	Mtr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487479 GeneID:238505 MGI:894292
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0031419 - cobalamin binding [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0004156 - dihydropteroate synthase activity [Evidence IEA]; GO:0008898 - homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008705 - methionine synthase activity [Evidence IMP] [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009396 - folic acid and derivative biosynthesis [Evidence IEA]; GO:0009086 - methionine biosynthesis [Evidence IMP] [Evidence IEA] codon_start : 1 note : Methionine synthase product : 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : NP_001074597.1

name	LOC100039648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039648
definition	number : 1 pseudo : _no_value

name	LOC100039648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039648
definition	number : 2 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 4 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 3 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 2 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 1 pseudo : _no_value

clone name	MSMg01-529L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H01
singlet/doublet	doublet
plural/unique	plural

clone name	B6Ng01-245N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296I17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-189I03.b	B6Ng01-189I03.g
ACC	GA013513	GA013514
length	1,176	1,208
definition	B6Ng01-189I03.b	B6Ng01-189I03.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctacattaaaatcatcaggccatgggctttttctggtagggagaa ttttaatgattgcttatttttccataggttataggtgtatttagattgtg tacttgatcttgatttagctttggtaagtgatacctatcaagaaaatcat ctatttcatttagatttttccaattttgtggagttcaactttttgaagta agacctaagagggtttttgtttgtttgtttgtttgttttttggatttcct cagtgtctgttgttatgtctcccttttcatttctgattttgttgatttgt atgctgtccctctgccttttatttagtttggctaaaagtttgtctgtctt gttgattttctcaaataaccagctcttggtttcattgattatttgtattg ttctctctttttttctaattgattgatttcagccctgaatttgattattt cctgctgtctactccccttgggtgtgtttgattctttttattacagacat ttcaggtgtgctgttatgtcattagtattagatctcactaatttctttat tatggtactcagtgctatgaactttcctcttaatgacgatttcattgagt ctcataagatttgttatgatctgcattaattttactgaattctagaaact ttttaatttctttcttatttcttctttgacaaagtggtcattgagtagag agttgtccagttttcatgtgtttgaaggctttctgttgcttctattgctg ttgaagcccatggttgtttgataagatacaggggattatttcaattgtat ctcttgggactttctttttgactgaaatagatggtcagctttggagaaga ttctagcggtgctgagaagaaggtatattttttttgtttgtttttgtgaa atttcctgtagatatctgttaggttccattttcattataatatctattgt tcaattatttctctgtttagtttctgctggatgacctgtccattggggga aagtgggtgttgaagcctacactatcaattggtgagtctcaatttgtctt taaacctttagtaacatttcttttatggaatttcaaggctcctgcaacct tggggaacaatagaattatcgaaccgacacgtcaccatgggggattttcc ttaaggagaatgaagctgtcatttca	gaattccatgtgtagaacagcatttccacacaggccagaagatgggttac aagacattatgagccatcaggcatggcttctgggaacaaaactcaggtct actgcaagagcagcaattgattactcttaacttctccccaccaccaccaa gcctgccactggctgtcatgcctgtccgccatgatggactcataacctcc agaaccacaacacaaaaataaatactttcttctgtatgctgctttgctca taaagttttttcacagcgacagaaaagggacaagtctggctagaaaggca ggacatcagcgagcaagataaaaggtatcttgaggcccctgaagcaagat aaaagcatgtagcacaggcacctctagtggttaaccctgactacatttct gttattattgtgtacttttgttttatattatcatacaatgtattaggttt cgtggtggctttttttcaaataaaatttggttttgttaattttacttgct cctctcttccattcctctgccccttaactattaataccctcccaaaagcc ttctttcagtttttgtgtgacacatggtctttcccgcttcacattcccca acattgttcattcccttctcagaacatctcagttagttttattgcctgtc tccacatccactccacttatacaaatacacacacacacacacacacacac acacacacacacacacatacatactgttttaagggtctaactttccacct tagagaatagtgctgagattaatgccaggcacgtgaggtgagaaagatgg cataaaaccaagtaattatctggtattttaattttgatttttaaaaaaca aattcataaaaagaaggaaaaaaattatgggcccacatcagccataaaag tgttgggaactgtggaaaaatgggggtctatagacagtacagagatgtct gcaaaggacagccttgggttttaaagtattaatcgaagcacaatttgaag ttttcctccagcagagaagtggatattccacttgaagagattccttattt tggcgttcataattcagcgattggatggcttgagatgagacagtgattct tgaaaacagcccaatgttttttcttggatgcatgaaaatgaacactgtgg gctgaatttggaagttccaggaaaagccagacagtttttaattttttgca cacatagc
quality values	Open. Hide. 39 22 35 35 58 58 58 52 42 20 58 58 54 54 62 43 42 41 27 62 47 47 62 49 62 41 31 62 62 62 62 62 62 51 50 32 34 56 44 49 38 56 59 59 62 62 62 62 62 44 44 62 62 59 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 59 59 62 62 62 62 62 59 56 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 47 62 62 62 62 62 54 54 56 56 56 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 54 56 62 62 62 62 54 46 42 62 47 52 42 62 62 62 62 52 62 62 47 46 62 62 62 62 62 54 62 48 52 54 44 31 54 52 62 62 62 62 62 62 62 62 62 62 62 52 49 46 54 58 58 48 34 32 52 44 54 50 52 41 42 54 41 38 58 58 58 54 54 46 54 47 54 41 54 54 40 52 48 54 58 50 52 54 58 54 58 58 46 58 58 58 42 54 58 58 58 54 45 49 54 58 42 54 34 58 17 26 58 39 41 24 58 42 54 46 39 58 54 58 54 54 54 42 29 58 54 52 37 43 44 26 53 41 30 27 45 54 32 50 52 24 58 41 45 39 39 58 51 37 40 54 42 37 52 58 58 53 53 33 49 51 47 54 40 45 58 26 39 43 24 39 31 58 58 50 53 46 19 6 34 12 21 30 37 25 28 41 50 32 41 46 39 51 37 32 36 26 58 19 28 58 50 40 34 50 44 21 32 32 24 58 50 39 26 9 11 25 21 41 28 41 50 27 29 41 42 50 31 18 46 37 36 46 53 37 39 29 24 28 29 24 29 40 40 49 53 35 29 44 42 32 37 30 50 54 31 42 39 54 54 54 38 17 28 21 29 29 9 51 23 37 49 18 40 30 53 51 25 42 31 25 40 33 54 20 28 27 44 26 32 29 12 42 13 51 27 16 32 26 37 25 39 18 40 32 53 24 38 7 33 41 8 51 25 18 31 8 25 25 6 9 32 53 52 49 46 49 25 35 35 32 28 9 5 32 47 53 46 27 30 18 16 51 26 24 51 30 46 9 14 51 21 36 18 20 17 12 12 31 25 32 13 25 32 30 18 8 10 31 30 15 31 51 43 31 25 8 27 31 31 16 18 31 30 31 24 33 7 21 36 44 46 10 23 38 21 31 30 27 18 33 46 27 46 23 32 26 46 20 37 22 25 11 19 31 7 19 16 12 7 7 26 21 31 31 22 36 23 9 8 31 12 31 32 28 31 27 32 39 13 38 11 29 24 20 15 17 14 25 14 5 23 17 26 32 31 31 8 33 23 13 32 25 9 20 15 27 16 28 21 8 5 9 5 6 13 11 24 4 4 4 4 5 19 33 13 39 13 12 8 5 18 39 7 8 36 7 5 8 33 39 27 13 7 17 11 22 8 9 9 25 24 14 10 24 36 10 12 10 12 10 28 26 13 38 15 19 13 6 14 28 5 4 18 10 24 12 5 4 6 6 6 16 7 23 27 29 24 11 6 4 6 10 15 6 5 6 9 5 6 10 14 21 5 20 7 10 5 5 10 6 25 5 9 16 7 6 6 3 5 2 12 6 12 25 12 22 24 28 30 19 16 17 15 20 17 18 7 10 8 4 11 14 16 8 14 16 5 4 4 6 4 7 7 20 24 12 19 4	Open. Hide. 62 47 42 47 62 62 47 33 62 62 62 62 47 42 38 38 38 56 28 34 43 56 59 62 62 62 59 39 62 59 62 59 62 62 62 59 59 62 62 54 38 54 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 54 49 62 62 54 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 59 56 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 62 62 62 62 43 43 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 58 58 58 54 58 45 40 54 54 58 54 54 58 58 54 54 52 58 58 54 54 54 58 58 58 58 58 58 52 58 54 58 42 42 52 52 39 54 58 58 54 54 54 49 15 43 58 58 54 58 58 58 52 52 54 54 58 58 54 54 54 48 52 54 54 52 54 58 58 46 58 54 46 45 54 52 54 54 54 58 54 54 54 52 30 54 54 50 52 54 51 50 51 52 35 58 51 53 53 53 49 36 47 41 46 50 54 42 50 50 58 50 50 47 50 25 19 47 33 50 50 51 37 42 43 50 42 39 53 50 49 39 53 39 50 37 38 46 43 28 42 28 50 19 28 42 48 37 50 36 38 16 19 9 11 9 17 35 42 35 50 36 40 20 46 31 46 30 40 28 42 29 38 35 42 32 28 21 30 23 30 28 41 27 54 39 58 50 58 33 58 44 40 33 28 37 39 40 30 38 26 9 25 39 23 40 10 37 32 25 41 40 40 50 50 16 58 17 33 27 19 42 32 25 35 29 45 37 39 8 22 19 18 37 49 37 32 21 49 28 32 47 37 26 46 45 53 45 52 27 41 16 37 50 19 49 44 52 32 34 32 37 28 9 20 29 18 44 44 26 35 52 20 54 25 29 51 28 34 40 27 32 20 12 54 35 23 29 16 27 31 6 12 8 4 12 23 33 32 30 24 51 47 47 30 31 40 40 40 52 33 22 17 29 40 32 25 27 24 32 25 47 40 40 22 4 11 9 11 9 27 30 31 32 29 33 7 19 18 13 31 28 37 17 6 24 17 24 21 28 33 32 21 14 27 8 21 18 30 51 51 30 18 19 19 14 24 14 40 23 18 25 13 11 31 29 31 24 30 32 36 32 6 9 31 30 37 37 21 23 34 30 24 24 16 12 18 19 18 24 10 12 22 23 6 22 6 26 13 29 29 30 30 32 23 25 41 12 31 25 29 31 14 9 14 39 11 11 20 28 23 16 31 23 9 10 6 17 23 21 23 22 39 16 9 22 31 14 16 33 11 26 7 14 21 18 17 38 22 25 10 21 8 32 44 32 10 29 6 11 20 9 16 8 13 19 10 14 5 22 30 9 17 9 13 20 7 5 7 9 16 11 12 9 22 9 20 12 10 6 17 8 18 19 8 5 7 17 24 21 10 33 20 14 19 13 13 11 23 8 12 8 7 9 33 17 11 22 9 16 13 7 15 7 8 21 6 10 10 16 17 8 13 11 16 9 11 18 15 9 15 9 13 6 13 10 13 21 7 13 8 10 7 20 5 3 5 17 3 8 6 10 8 13 6 10 22 5 14 5 21 40 40 30 9 10 7 6 10 6 5 1 3 3 2 4 10 2 17 20 8 16 12 14 6 16 7 17 9 14 7 10 17 17 7 4 3 2 1 7 22 13 6 3 3 2 4 4 6 4 6 6 4 5 5 13 25 21 5 7 4 19 8 22 8 9 17 8 28 29 14 11 11 15 7 17 11 28 19 7 2 1 2 8 9 5 4 7 6 4 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_11296719_11297903
seq2: B6Ng01-189I03.g_69_1276

seq1  GAATTCCATGTGTAGAACAGCATTTCCACACAGGCCAGAAGATGGGTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTGTAGAACAGCATTTCCACACAGGCCAGAAGATGGGTTAC  50

seq1  AAGACATTATGAGCCATCAGGCATGGCTTCTGGGAACAAAACTCAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTATGAGCCATCAGGCATGGCTTCTGGGAACAAAACTCAGGTCT  100

seq1  ACTGCAAGAGCAGCAATTGATTACTCTTAACTTCTCCCCACCACCACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGAGCAGCAATTGATTACTCTTAACTTCTCCCCACCACCACCAA  150

seq1  GCCTGCCACTGGCTGTCATGCCTGTCCGCCATGATGGACTCATAACCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCACTGGCTGTCATGCCTGTCCGCCATGATGGACTCATAACCTCC  200

seq1  AGAACCACAACACAAAAATAAATACTTTCTTCTGTATGCTGCTTTGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCACAACACAAAAATAAATACTTTCTTCTGTATGCTGCTTTGCTCA  250

seq1  TAAAGTTTTTTCACAGCGACAGAAAAGGGACAAGTCTGGCTAGAAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTTTTTCACAGCGACAGAAAAGGGACAAGTCTGGCTAGAAAGGCA  300

seq1  GGACATCAGCGAGCAAGATAAAAGGTATCTTGAGGCCCCTGAAGCAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCAGCGAGCAAGATAAAAGGTATCTTGAGGCCCCTGAAGCAAGAT  350

seq1  AAAAGCATGTAGCACAGGCACCTCTAGTGGTTAACCCTGACTACATTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATGTAGCACAGGCACCTCTAGTGGTTAACCCTGACTACATTTCT  400

seq1  GTTATTATTGTGTACTTTTGTTTTATATTATCATACAATGTATTAGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATTGTGTACTTTTGTTTTATATTATCATACAATGTATTAGGTTT  450

seq1  CGTGGTGGCTTTTTTTCAAATAAAATTTGGTTTTGTTAATTTTACTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGTGGCTTTTTTTCAAATAAAATTTGGTTTTGTTAATTTTACTTGCT  500

seq1  CCTCTCTTCCATTCCTCTGCCCCTTAACTATTAATACCCTCCCAAAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTCCATTCCTCTGCCCCTTAACTATTAATACCCTCCCAAAAGCC  550

seq1  TTCTTTCAGTTTTTGTGTGACACATGGTCTTTCCCGCTTCACATTCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAGTTTTTGTGTGACACATGGTCTTTCCCGCTTCACATTCCCCA  600

seq1  ACATTGTTCATTCCCTTCTCAGAACATCTCAGTTAGTTTTATTGCCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTCATTCCCTTCTCAGAACATCTCAGTTAGTTTTATTGCCTGTC  650

seq1  TCCACATCCACTCCACTTATACAAATACACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCACTCCACTTATACAAATACACACACACACACACACACACAC  700

seq1  ACACACACACACACACATACATACTGTTTTAAGGGTCTAAC-TTCCACCT  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACACACACACACACACATACATACTGTTTTAAGGGTCTAACTTTCCACCT  750

seq1  TAGAGAATAGTGCTGAGATTAATGCCAGGCACGTGAGGTGAGAAAGATGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATAGTGCTGAGATTAATGCCAGGCACGTGAGGTGAGAAAGATGG  800

seq1  CATAAAACCAAGTAATTATCTGGTA-TTTAAATTTGATTTTTAAAAAACA  848
      ||||||||||||||||||||||||| ||||| ||||||||||||||||||
seq2  CATAAAACCAAGTAATTATCTGGTATTTTAATTTTGATTTTTAAAAAACA  850

seq1  AATTCATAAAAAAGAGG-AAAAAATTATGGG-CCACATCAG-CATAAAAG  895
      ||||||||||||  ||| ||||||||||||| ||||||||| ||||||||
seq2  AATTCATAAAAAGAAGGAAAAAAATTATGGGCCCACATCAGCCATAAAAG  900

seq1  TGTTGGGAACTGTGGAAAA--TGGGGTCTATAGACAGTACAGAGATGTCT  943
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  TGTTGGGAACTGTGGAAAAATGGGGGTCTATAGACAGTACAGAGATGTCT  950

seq1  GC-AAGGACAGCC-TGGGTTTTAAAGTATT-ATCGAAGCACAA-TTGA--  987
      || |||||||||| |||||||||||||||| |||||||||||| ||||  
seq2  GCAAAGGACAGCCTTGGGTTTTAAAGTATTAATCGAAGCACAATTTGAAG  1000

seq1  GTTTCCT-CAGCAGAGAAGT-GATA-TCCACTTG-AGAGATT-CTTA-TT  1031
       |||||| |||||||||||| |||| |||||||| ||||||| |||| ||
seq2  TTTTCCTCCAGCAGAGAAGTGGATATTCCACTTGAAGAGATTCCTTATTT  1050

seq1  TGGCG-TCATAA-TCAGCGA-TGGATGGCTTGAGATGAGACAGTGA-TCT  1077
      ||||| |||||| ||||||| ||||||||||||||||||||||||| |||
seq2  TGGCGTTCATAATTCAGCGATTGGATGGCTTGAGATGAGACAGTGATTCT  1100

seq1  TGAAAAACAGCCAAATG-GTTTTCTGAGTGGCATGGAAATGAACCACTGT  1126
      || ||||||||| ||||  ||||||  |  ||||| ||||||| ||||||
seq2  TG-AAAACAGCCCAATGTTTTTTCTTGGATGCATGAAAATGAA-CACTGT  1148

seq1  GGGCTGGGATTTGGAAAGTGTCAAGGGAAAAGCAAGACAG-TTTTAATTT  1175
      ||||| | |||||| ||||  ||  |||||||| |||||| |||||||||
seq2  GGGCT-GAATTTGG-AAGTTCCA--GGAAAAGCCAGACAGTTTTTAATTT  1194

seq1  TT----GACATAGC  1185
      ||     |||||||
seq2  TTTGCACACATAGC  1208

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information