BAC Information

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BAC

Clone NameB6Ng01-191D16
Chromosome13 (Build37)
Map Location 44,156,474 - 44,260,420
singlet/doubletdoublet
Overlap geneA730030A06
Upstream genePhactr1, Tbc1d7, Gfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432
Downstream geneEG637868, EG667157, Jarid2, Dtnbp1, Hsp25-ps1, LOC100039502
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191D16.bB6Ng01-191D16.g
ACCGA014776GA014777
length3841,069
definitionB6Ng01-191D16.b B6Ng01-191D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,260,038 - 44,260,420)(44,156,474 - 44,157,550)
sequence
atagcttgctaagcctagaccacacaatagccttgagctggaaatttcta
tcagggtgccacactgcttctcttgggggcagggggtaccagaagcactg
ctacccatgcaaacaggcttataatctccagatcagaggacaaagggctt
tgtctctggccctcagaccagtcactctgaggaggtgagagacaagctct
ggccttggacacatgagagtactgttcttagtgtttctgcatcctgaatt
agtcagggtttctattcctgcacaaacatcatgaccaagaatcaagttgg
ggaggaagggtttattcaacttacatttccgcattgctgtaaatctccaa
aggaagtcaggactggaactcaagcaggtcaggc
gaattcatttataaaggaaatttccatttgagaagtctctcccacaccag
aaaagggaggaatccacatgacgtaccttcctgaacaactctcttcacct
gcttgtcccattcaccttcctacagctgccttgactcggtttaaaactgt
ctatgttcttgtcattgacttgtggggggagggttacttatctctgggta
tttccatgtcttagcacaatgcacatgttaataaacttctgtttgttttt
ccgttattaacttgtggtttgtatagggcaccatctggagatctgaggaa
tagcaacaattctttccctgcaagacctggaagacgacttgcagatcttg
ggtgggtacactgatagaggaagctagtcaaggtctaatgagcaagtctc
actaaaccaatagtcagccttacccttctcccccctccccatgacttaaa
gagccacttttgcaaggatgtctcttaggtgcctatcttgctagaatctt
cagcacaaaggattaaatcaagatctcaatagattgcacccaaccttgga
aaagttcatcagggccaacgcaatccttcgctgggagaatgcaatggatc
cactgagcacaaaaaaaataaaaaaaaaaaataaaaaatataaaaataaa
aaagaagatttcttttcaagtcacgggtcttctgattctcaccttgcaaa
tctgaaaagagcgaaattcatagaccacaggggcacgaattagaaaagat
ctggatcacagatttatggtggcagcttgagggagtaggcagagttccca
gagaacagggagtgtgtccctgtagtctaagggtttggatgtcaggaact
aacagtgggacatgaggtagaaggggtgagctggtcacctcttctcagtt
tgcttgtgttcctcaggttcaggcaggtattcatttagggggagaagaga
tgctgaagatcatcttcccgagggcatcctggctctgaaacagaactgct
gaagaaccgggatatgtgcttaaccaaggaccaaactattacctggtcgc
ttcctcttgaggctgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44260038_44260420
seq2: B6Ng01-191D16.b_44_426 (reverse)

seq1  CCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAA  50
      ||||||||||||||||||||||||||||||||||||| |||  |||||||
seq2  CCTGACCTGCTTGAGTTCCAGTCCTGACTTCCTTTGGAGATTTACAGCAA  50

seq1  TGCGGAAATGTAAGCTGAATAAACCCTTCCTCCCCAACTTGATTCTTGGT  100
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCGGAAATGTAAGTTGAATAAACCCTTCCTCCCCAACTTGATTCTTGGT  100

seq1  CATGATGTTTGTGCAGGAATAGAAACCCTGACTAATTCAGGATGCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGTTTGTGCAGGAATAGAAACCCTGACTAATTCAGGATGCAGAAA  150

seq1  CACTAAGAACAGTACTCTCATGTGTCCAAGGCCAGAGCTTGTCTCTCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGAACAGTACTCTCATGTGTCCAAGGCCAGAGCTTGTCTCTCACC  200

seq1  TCCTCAGAGTGACTGGTCTGAGGGCCAGAGACAAAGCCCTTTGTCCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGAGTGACTGGTCTGAGGGCCAGAGACAAAGCCCTTTGTCCTCTG  250

seq1  ATCTGGAGATTATAAGCCTGTTTGCATGGGTAGCAGTGCTTCTGGTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGATTATAAGCCTGTTTGCATGGGTAGCAGTGCTTCTGGTACCC  300

seq1  CCTGCCCCCAAGAGAAGCAGTGTGGCACCCTGATAGAAATTTCCAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCCCAAGAGAAGCAGTGTGGCACCCTGATAGAAATTTCCAGCTCA  350

seq1  AGGCTATTGTGTGGTCTAGGCTTAGCAAGCTAT  383
      |||||||||||||||||||||||||||||||||
seq2  AGGCTATTGTGTGGTCTAGGCTTAGCAAGCTAT  383

seq1: chr13_44156474_44157550
seq2: B6Ng01-191D16.g_63_1131

seq1  GAATTCATTTATAAAGGAAATTTCCATTTGAGAAGTCTCTCCCACACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATAAAGGAAATTTCCATTTGAGAAGTCTCTCCCACACCAG  50

seq1  AAAAGGGAGGAATCCACATGACGTACCTTCCTGAACAACTCTCTTCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGAGGAATCCACATGACGTACCTTCCTGAACAACTCTCTTCACCT  100

seq1  GCTTGTCCCATTCACCTTCCTACAGCTGCCTTGACTCGGTTTAAAACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCCCATTCACCTTCCTACAGCTGCCTTGACTCGGTTTAAAACTGT  150

seq1  CTATGTTCTTGTCATTGACTTGTGGGGGGAGGGTTACTTATCTCTGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTCTTGTCATTGACTTGTGGGGGGAGGGTTACTTATCTCTGGGTA  200

seq1  TTTCCATGTCTTAGCACAATGCACATGTTAATAAACTTCTGTTTGTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTCTTAGCACAATGCACATGTTAATAAACTTCTGTTTGTTTTT  250

seq1  CCGTTATTAACTTGTGGTTTGTATAGGGCACCATCTGGAGATCTGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTATTAACTTGTGGTTTGTATAGGGCACCATCTGGAGATCTGAGGAA  300

seq1  TAGCAACAATTCTTTCCCTGCAAGACCTGGAAGACGACTTGCAGATCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAATTCTTTCCCTGCAAGACCTGGAAGACGACTTGCAGATCTTG  350

seq1  GGTGGGTACACTGATAGAGGAAGCTAGTCAAGGTCTAATGAGCAAGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTACACTGATAGAGGAAGCTAGTCAAGGTCTAATGAGCAAGTCTC  400

seq1  ACTAAACCAATAGTCAGCCTTACCCTTCTCCCCCCTCCCCATGACTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCAATAGTCAGCCTTACCCTTCTCCCCCCTCCCCATGACTTAAA  450

seq1  GAGCCACTTTTGCAAGGATGTCTCTTAGGTGCCTATCTTGCTAGAATCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTTTTGCAAGGATGTCTCTTAGGTGCCTATCTTGCTAGAATCTT  500

seq1  CAGCACAAAGGATTAAATCAAGATCTCAATAGATTGCACCCAACCTTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACAAAGGATTAAATCAAGATCTCAATAGATTGCACCCAACCTTGGA  550

seq1  AAAGTTCATCAGGGCCAACGCAATCCTTCGCTGGGAGAATGCAATGGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATCAGGGCCAACGCAATCCTTCGCTGGGAGAATGCAATGGATC  600

seq1  CACTGAGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  650
      |||||||||||||||||| |||||||||||| |||||| | ||||| |||
seq2  CACTGAGCACAAAAAAAATAAAAAAAAAAAATAAAAAATATAAAAATAAA  650

seq1  AAAAAAAAAAAATCTTCCAAGTCACTGGTCTTCTGATTCTCACCTTGCAA  700
      ||| || |    | || |||||||| ||||||||||||||||||||||||
seq2  AAAGAAGATTTCT-TTTCAAGTCACGGGTCTTCTGATTCTCACCTTGCAA  699

seq1  ATCTGAAAAGAGCGAAATTCATAGACCACAGGGGCACGAATTAGAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAAAGAGCGAAATTCATAGACCACAGGGGCACGAATTAGAAAAGA  749

seq1  TCTGGATCACAGATTTATGGTGGCAGCTTGAGGGAGTAGGCAGAGTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCACAGATTTATGGTGGCAGCTTGAGGGAGTAGGCAGAGTTCCC  799

seq1  AGAGAACA-GGAGTGTGTCCCTGTTAGTCTAAGGGTTTGGATGTCAGGAA  849
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  AGAGAACAGGGAGTGTGTCCCTG-TAGTCTAAGGGTTTGGATGTCAGGAA  848

seq1  CT-ACAGTGGGACATGAGGTAGA--GGGTGAGCTGGTCACCTCTTCTCAG  896
      || ||||||||||||||||||||  |||||||||||||||||||||||||
seq2  CTAACAGTGGGACATGAGGTAGAAGGGGTGAGCTGGTCACCTCTTCTCAG  898

seq1  TTTGC-TGTG-TCCTCAGGTCCAGGCA-GTATTCATTTAGGGGGAG-AGA  942
      ||||| |||| ||||||||| |||||| |||||||||||||||||| |||
seq2  TTTGCTTGTGTTCCTCAGGTTCAGGCAGGTATTCATTTAGGGGGAGAAGA  948

seq1  GATGCTG-AGATCAACCTCCCGAGGGCATCCCTGGCCACTG-AACAGAAC  990
      ||||||| |||||| | |||||||||||| ||||| | ||| ||||||||
seq2  GATGCTGAAGATCATCTTCCCGAGGGCAT-CCTGG-CTCTGAAACAGAAC  996

seq1  TGCTGACAGAACGGGGGATATTTGTGGCTTTTAGCCAAGGACCAAACTAT  1040
      |||||| ||||| |||   || ||||    ||| ||||||||||||||||
seq2  TGCTGA-AGAACCGGG---ATATGTG---CTTAACCAAGGACCAAACTAT  1039

seq1  TTACTCTTGGGTCCGCTTCCTTCCTTGAGGCTGCCTG  1077
      |  ||    ||| ||||||||  ||||||||||||||
seq2  TACCT----GGT-CGCTTCCT--CTTGAGGCTGCCTG  1069