BAC Information

Click to search

BAC

Clone NameB6Ng01-191N08
Chromosome13 (Build37)
Map Location 9,141,922 - 9,291,623
singlet/doubletdoublet
Overlap geneLarp5, EG667727, LOC100039719, Dip2c
Upstream geneAdarb2, EG666941, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721
Downstream geneLOC666986, Zmynd11, Chrm3, LOC100039604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191N08.bB6Ng01-191N08.g
ACCGA015229GA015230
length1,1691,140
definitionB6Ng01-191N08.b B6Ng01-191N08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,290,465 - 9,291,623)(9,141,922 - 9,143,061)
sequence
gaattcaggagcccagcactcatgcatgaaagccacggtctggccatgtg
tgcctgtaatcccagtgctgaggagacggagacagaaacaggggatccct
ggagcttgctggactaccagcctacccaaataagtgaactctatgttcag
tgagagagcctgtctcaaaacttaaggtggagagcaatcaaggaagatac
ctgatagcaacatctggcctcaacatacaaatatgtacatacatttgcat
gtacatacacaagcatgtacacatgcttaacaacaacaataaattaaata
gataactctaactatcttcccagagaatacaggagttagcagtcacatca
tcaacactttcatctgatcctacagtagatattatagaatccctctacag
tatgaagtcaagatgaaaaatataattaattcaaaatgtagtataatgac
tcagtcatccataatcaacttaatataatccactgaaagtcaaattgcat
ctttaagactgagttattatacagataggggaaactttagatttaaaaca
tttaaatgagccaatatcttatttattttaattctgacaaccacggcacc
acctaaaacaagactgaatatattcacagcttaaagaacaggtggattca
tagatatgcaaaaattatatgaagatacaattaatgttccatgatttaca
tttaaacttgtcatgtgaattccaatgtgtaggaagcatttatactactt
tctaaatgaaaattttgatgtatatacaacataaaaattatcttgttttg
gaactcatttatttagtatagctaggacccccttaaggaattccttatag
ttccatattcatctttattaatgttgaggtacacagttttcgactaaaaa
aatgggaaaatgcctttacttaacatctgcactcagcttgtattatagga
aaatgattatgaatacaaacacaccacatataatttaacatcttcagtta
tacatacgaaatcataaattgcgaatagaatcagggacatggggaggagg
ggtgaatattgccagccagacatggaggtgagtagaaaaaacatctcacg
ccagtatcccagatgcacatgccatattaaaatgtccctcatcgacacat
gatccttctggtaaacctt
gaattcacagttcctgtatcaaataattgtctcttcaatatggagattgg
aatgtgagtttaaatgagataacctggggaaagtctccagttcagggatt
aacaggccacaagttttcactttcaagtctcatgatctttattccttggt
tatttttgcagtttagtttctttttgctagtgaagatgtattttgtgaat
gctccatatgttgtgaatgctctgtaagacactgttatgaactgtcagct
ctacatttgttctgaattcccccaccttgtctgccttttactagtcttta
accttgacttttagaatacaagtgtcctttgtcctctcttggctgactta
tgtacaaaaactcaatgtgttcaatgccttcaaaccagtgatactaaata
ctaggtgacaaggttgtcctgagtgctacaggtggcaggggctttcagcc
gaacgtcacactgctagagtccattgcctcacctgctgctgctgtctgtg
accatatacacatacctgtggtgccccaaacatcgtttccgcaacagttt
cctccagatgtagaacaagctcttgtgccctgagaatctgatgaggactc
tttaataaaatcgtttctcatttgcccctttgacagctctcctatagaac
aaatggcccccgtatcagcagtctccaactctcttccttacctttccact
ggggtggtttgggttcacctgtattctctttgctttgttttgatgctttc
ttttgcaattacttttctttagagtcagtgtgcttgtttgctacctgaaa
accttttctgaagtaaggcaagataccaaggaagcctgtgctgactgctg
tgggacagagtcactgctagacttggccaatgaaatgccattgctttctc
agttattgcgtttgtttgttttttcacaggtttacttttttctagcaggt
aaaataagtacttttttgtatattgtgcgtatatgcaaggtgaatcactg
aaatgctgatactgattaccaatgtgcttggtaaattttaaagccatttt
ttcctgagttatttattacttctggttaggagaaatggattctcatcaga
aatgtcaaggaggaccctcggagtactaaaaaaaacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_9290465_9291623
seq2: B6Ng01-191N08.b_47_1215 (reverse)

seq1  AAGG-TTACCAGAAAGGATCATGTCGAAAGGAGGGAACATTTTTATATGG  49
      |||| ||||||| |||||||||||    | ||||| ||||||| ||||||
seq2  AAGGTTTACCAG-AAGGATCATGTGTCGATGAGGG-ACATTTTAATATGG  48

seq1  CATGTGGCCATCTTGGGATACTGCGTTGAGATG--TTTTCTACTCAC--T  95
      ||||||  |||| ||||||||||   |||||||  ||||||||||||   
seq2  CATGTG--CATC-TGGGATACTGGCGTGAGATGTTTTTTCTACTCACCTC  95

seq1  CATGTCT-GCTGGC-ATATTCA-CACTC--TCCCATGTCCCCTGATTCTA  140
      ||||||| |||||| ||||||| | |||   ||||||| |||||||||||
seq2  CATGTCTGGCTGGCAATATTCACCCCTCCTCCCCATGT-CCCTGATTCTA  144

seq1  TTCGCA--TTATGATTTCGTATGTATAACTG-AGATGTT-AATTATATGT  186
      ||||||  ||||||||||||||||||||||| ||||||| ||||||||||
seq2  TTCGCAATTTATGATTTCGTATGTATAACTGAAGATGTTAAATTATATGT  194

seq1  -GTGTGTTTGTATTCATAATCATTTTTCCTATAATACAAGCTGAGTGCAG  235
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTGTGTTTGTATTCATAATCA-TTTTCCTATAATACAAGCTGAGTGCAG  243

seq1  ATGTTAAGTAAAGGCATTTTCCCATTTTTTTAGTCGAAAACTGTGTACCT  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGTAAAGGCATTTTCCCATTTTTTTAGTCGAAAACTGTGTACCT  293

seq1  CAACATTAATAAAGATGAATATGGAACTATAAGGAATTCCTTAAGGGGGT  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTAATAAAGATGAATATGGAACTATAAGGAATTCCTTAAGGGGGT  343

seq1  CCTAGCTATACTAAATAAATGAGTTCCAAAACAAGATAATTTTTATGTTG  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTATACTAAATAAATGAGTTCCAAAACAAGATAATTTTTATGTTG  393

seq1  TATATACATCAAAATTTTCATTTAGAAAGTAGTATAAATGCTTCCTACAC  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATCAAAATTTTCATTTAGAAAGTAGTATAAATGCTTCCTACAC  443

seq1  ATTGGAATTCACATGACAAGTTTAAATGTAAATCATGGAACATTAATTGT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAATTCACATGACAAGTTTAAATGTAAATCATGGAACATTAATTGT  493

seq1  ATCTTCATATAATTTTTGCATATCTATGAATCCACCTGTTCTTTAAGCTG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATATAATTTTTGCATATCTATGAATCCACCTGTTCTTTAAGCTG  543

seq1  TGAATATATTCAGTCTTGTTTTAGGTGGTGCCGTGGTTGTCAGAATTAAA  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATATTCAGTCTTGTTTTAGGTGGTGCCGTGGTTGTCAGAATTAAA  593

seq1  ATAAATAAGATATTGGCTCATTTAAATGTTTTAAATCTAAAGTTTCCCCT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGATATTGGCTCATTTAAATGTTTTAAATCTAAAGTTTCCCCT  643

seq1  ATCTGTATAATAACTCAGTCTTAAAGATGCAATTTGACTTTCAGTGGATT  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATAATAACTCAGTCTTAAAGATGCAATTTGACTTTCAGTGGATT  693

seq1  ATATTAAGTTGATTATGGATGACTGAGTCATTATACTACATTTTGAATTA  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGTTGATTATGGATGACTGAGTCATTATACTACATTTTGAATTA  743

seq1  ATTATATTTTTCATCTTGACTTCATACTGTAGAGGGATTCTATAATATCT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTTTTCATCTTGACTTCATACTGTAGAGGGATTCTATAATATCT  793

seq1  ACTGTAGGATCAGATGAAAGTGTTGATGATGTGACTGCTAACTCCTGTAT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGGATCAGATGAAAGTGTTGATGATGTGACTGCTAACTCCTGTAT  843

seq1  TCTCTGGGAAGATAGTTAGAGTTATCTATTTAATTTATTGTTGTTGTTAA  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGAAGATAGTTAGAGTTATCTATTTAATTTATTGTTGTTGTTAA  893

seq1  GCATGTGTACATGCTTGTGTATGTACATGCAAATGTATGTACATATTTGT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTACATGCTTGTGTATGTACATGCAAATGTATGTACATATTTGT  943

seq1  ATGTTGAGGCCAGATGTTGCTATCAGGTATCTTCCTTGATTGCTCTCCAC  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGAGGCCAGATGTTGCTATCAGGTATCTTCCTTGATTGCTCTCCAC  993

seq1  CTTAAGTTTTGAGACAGGCTCTCTCACTGAACATAGAGTTCACTTATTTG  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTTTGAGACAGGCTCTCTCACTGAACATAGAGTTCACTTATTTG  1043

seq1  GGTAGGCTGGTAGTCCAGCAAGCTCCAGGGATCCCCTGTTTCTGTCTCCG  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCTGGTAGTCCAGCAAGCTCCAGGGATCCCCTGTTTCTGTCTCCG  1093

seq1  TCTCCTCAGCACTGGGATTACAGGCACACATGGCCAGACC-TGGCTTTCA  1134
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTCCTCAGCACTGGGATTACAGGCACACATGGCCAGACCGTGGCTTTCA  1143

seq1  TGCATGAGTGCTGGGCT-CTGAATTC  1159
      ||||||||||||||||| ||||||||
seq2  TGCATGAGTGCTGGGCTCCTGAATTC  1169

seq1: chr13_9141922_9143061
seq2: B6Ng01-191N08.g_67_1206

seq1  GAATTCACAGTTCCTGTATCAAATAATTGTCTCTTCAATATGGAGATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTTCCTGTATCAAATAATTGTCTCTTCAATATGGAGATTGG  50

seq1  AATGTGAGTTTAAATGAGATAACCTGGGGAAAGTCTCCAGTTCAGGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGTTTAAATGAGATAACCTGGGGAAAGTCTCCAGTTCAGGGATT  100

seq1  AACAGGCCACAAGTTTTCACTTTCAAGTCTCATGATCTTTATTCCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCCACAAGTTTTCACTTTCAAGTCTCATGATCTTTATTCCTTGGT  150

seq1  TATTTTTGCAGTTTAGTTTCTTTTTGCTAGTGAAGATGTATTTTGTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGCAGTTTAGTTTCTTTTTGCTAGTGAAGATGTATTTTGTGAAT  200

seq1  GCTCCATATGTTGTGAATGCTCTGTAAGACACTGTTATGAACTGTCAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATATGTTGTGAATGCTCTGTAAGACACTGTTATGAACTGTCAGCT  250

seq1  CTACATTTGTTCTGAATTCCCCCACCTTGTCTGCCTTTTACTAGTCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGTTCTGAATTCCCCCACCTTGTCTGCCTTTTACTAGTCTTTA  300

seq1  ACCTTGACTTTTAGAATACAAGTGTCCTTTGTCCTCTCTTGGCTGACTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGACTTTTAGAATACAAGTGTCCTTTGTCCTCTCTTGGCTGACTTA  350

seq1  TGTACAAAAACTCAATGTGTTCAATGCCTTCAAACCAGTGATACTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAAAACTCAATGTGTTCAATGCCTTCAAACCAGTGATACTAAATA  400

seq1  CTAGGTGACAAGGTTGTCCTGAGTGCTACAGGTGGCAGGGGCTTTCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTGACAAGGTTGTCCTGAGTGCTACAGGTGGCAGGGGCTTTCAGCC  450

seq1  GAACGTCACACTGCTAGAGTCCATTGCCTCACCTGCTGCTGCTGTCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTCACACTGCTAGAGTCCATTGCCTCACCTGCTGCTGCTGTCTGTG  500

seq1  ACCATATACACATACCTGTGGTGCCCCAAACATCGTTTCCGCAACAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATACACATACCTGTGGTGCCCCAAACATCGTTTCCGCAACAGTTT  550

seq1  CCTCCAGATGTAGAACAAGCTCTTGTGCCCTGAGAATCTGATGAGGACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGATGTAGAACAAGCTCTTGTGCCCTGAGAATCTGATGAGGACTC  600

seq1  TTTAATAAAATCGTTTCTCATTTGCCCCTTTGACAGCTCTCCTATAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAAAATCGTTTCTCATTTGCCCCTTTGACAGCTCTCCTATAGAAC  650

seq1  AAATGGCCCCCGTATCAGCAGTCTCCAACTCTCTTCCTTACCTTTCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGCCCCCGTATCAGCAGTCTCCAACTCTCTTCCTTACCTTTCCACT  700

seq1  GGGGTGGTTTGGGTTCACCTGTATTCTCTTTGCTTTGTTTTGATGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGTTTGGGTTCACCTGTATTCTCTTTGCTTTGTTTTGATGCTTTC  750

seq1  TTTTGCAATTACTTTTCTTTAGAGTCAGTGTGCTTGTTTGCTACCTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAATTACTTTTCTTTAGAGTCAGTGTGCTTGTTTGCTACCTGAAA  800

seq1  ACCTTTTCTGAAGTAAGGCAAGATACCAAGGAAGCCTGTGCTGACTGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCTGAAGTAAGGCAAGATACCAAGGAAGCCTGTGCTGACTGCTG  850

seq1  TGGGACAGAGTCACTGCTAGACTTGGCCAATGAAATGCCATTGCTTTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGAGTCACTGCTAGACTTGGCCAATGAAATGCCATTGCTTTCTC  900

seq1  AGTTATTGCGTTTGTTTTGTTTTTTCACA-GTTTACTTTTTTCTAGCAGG  949
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  AGTTATTGCGTTTG-TTTGTTTTTTCACAGGTTTACTTTTTTCTAGCAGG  949

seq1  TAAAAT-AGTAC-TTTTTGTATTATTGTGCGTATATGC-AGGTGAAATCA  996
      |||||| ||||| |||||||| |||||||||||||||| ||||| |||||
seq2  TAAAATAAGTACTTTTTTGTA-TATTGTGCGTATATGCAAGGTG-AATCA  997

seq1  CTGAAATGCTG-TACTGAATTACCAATGTGCTTGGTAAATTTT-AAGCCA  1044
      ||||||||||| ||||| ||||||||||||||||||||||||| ||||||
seq2  CTGAAATGCTGATACTG-ATTACCAATGTGCTTGGTAAATTTTAAAGCCA  1046

seq1  TTTTTTTCCTGAGTTATTTATTACTTCTGTGTAGGAGGAAATGAGTCTCA  1094
       ||||||||||||||||||||||||||||  |||||| ||  || |||| 
seq2  -TTTTTTCCTGAGTTATTTATTACTTCTGGTTAGGAGAAATGGATTCTC-  1094

seq1  ACCAGAAA--GCCAGGAAGACCCTCGGGAAGTACTTAAAAAAACATTG  1140
      | ||||||   | |||| |||||||||  |||||| ||||||||||||
seq2  ATCAGAAATGTCAAGGAGGACCCTCGG--AGTACTAAAAAAAACATTG  1140