BAC Information

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BAC

Clone NameB6Ng01-193M12
Chromosome13 (Build37)
Map Location 115,072,455 - 115,073,571
singlet/doubletsinglet
Overlap genenone
Upstream geneBC067074, LOC100040888, Snag1, Hspb3, EG632832, LOC622701, LOC100040927, Arl15, A430090L17Rik
Downstream geneNdufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193M12.bB6Ng01-193M12.g
ACCGA016654GA016655
length1,1871,096
definitionB6Ng01-193M12.b B6Ng01-193M12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatagaagtatgctaataatactagtgaaagaaagaacttgcca
gcaagaatgaagacgagcatgcaaaaagcaagggcttccttttccaatgt
tctttctgtaggctgctactagaaggtgtgacccagatgtgtgatagatc
ttcccccctcaaattatccaatcaaccaaaatccctcacagacagtttgg
gctttggttacttctaaatgaagtcaagctggcaatcaagaatagccacc
acatcatcttcattatttactttttaagctactctctcagttgtacaaga
accctaattagctaagctaactgatctacacagaatatatttctaccaaa
ttctgttggtcatcaatcaaatgacctagatacgatacagctgtgctgtt
ggagtttgttgtgtgtcaaaacgttttcctgaggagatgcaacacacaca
tctactcaccccagatagggatcccactacaaactaaaatacaaatacca
cccaagtccaacttggtgagccaatgagttttattgcaagtacttacagg
aatatggatgagaggttaattacagcaaccaaaatgacaactgcatcaca
aagcccacccaacatgagtgacagctcacaaatctgggaacctggcaact
acacagctcaacaggtcaatgggggtccttttcaagagcttcagttgttc
tgagtctcttccaagaagtttggcttggctctgcttcttccaggtctggt
cttagagtcttctctgcagcttgccttgtctgagatgagctctaggcttt
tactgcttgcatattctagcaggaggcacctagtgaatctggtcattttc
aagggacttcctgaagctatttgagttgtttccctttcctgcttaatgat
tccattcaaggtgaatgttttggtctaagaggcagcataacaatttttgg
agtgatccctagcatttcacctacttaacatgtctaacctatcctaaact
ccttaagtaacattatcatatttcttcccttgttcctcctcttggagtga
aatgtccgttccagtgctcatatatactggatggagtactcctgtattat
tgaagcaatgtctaccacaccctttgaatcgaattccatctaggtactca
gtatcgaattcctcatttcgtatagataccgtgtctc
gaattcctgtcaccagcacagtccctagtagttctgaggtccggctggat
ctgcctgcctgcaagttcatctatatgcgttccttagtactatgggcttc
cttatctgtctctaaagcaccccatacccccccaccccaaacaactactt
gcctgccactgacagtctaactttgtgcctttcacacctctttgcctttc
cctcctccaggcagctgcagagatgtacagatagcctgccctggagtttt
tcttttacactttaaagatgctgtcctggagcttctgtttgagttccctc
ttaagttctcttattaatgagactctggttgctctggcatcaacaggact
ggagtcagttaccaagtgtatgtttgtgtgtctgtgatctatctactcaa
tgggtcttttgatgaaacacgagaacctacaagacatctagatcttgctc
tccactaaaatcaaacactgctccttggagaaatgattctagttctgagg
agagaatgtacaaaggaatgtaaaaatgtcagggatggaggaagaaatgt
gaaggacagtttgaaagcacttgaaatgcatgacagtaaggaatatgaat
gaaggaatctgttaagtcactggtaattaacacaacaatgataacatgga
caacaaaacctacctgggccagtgagtaaatctgaaagagatgtcagaac
caggagataataatcatgggccagagagatggctcacttacaacagtgtg
agatcaggaagccctgagtttaagtcccagcagttacataacaaacttac
tggagaacatacttattagaaaagaacaatcttgccataaatggtgaacc
cgagtctcaccatgaagaaacaaagaaatccaaaattgggaatattctac
ccagtgactaatttgggtttctagaataatgtccagtgatatgaaagaat
aaaagcaaaatcatgaacaggcagggaaacagagtgactagatgtctcag
cattagcactgcctgtcatgcaaagacttgaattgtctcaggcacctaat
gtgttccaacatctgtaacttcaggctgagatctgccaccctcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_115072455_115073571
seq2: B6Ng01-193M12.g_64_1159

seq1  GAATTCCTGTCACCAGCACAGTCCCTAGTAGTTCTGAGGTCCGGCTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCACCAGCACAGTCCCTAGTAGTTCTGAGGTCCGGCTGGAT  50

seq1  CTGCCTGCCTGCAAGTTCATCTATATGCGTTCCTTAGTACTATGGGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCTGCAAGTTCATCTATATGCGTTCCTTAGTACTATGGGCTTC  100

seq1  CTTATCTGTCTCTAAAGCACCCCATACCCCCCCACCCCAAACAACTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTGTCTCTAAAGCACCCCATACCCCCCCACCCCAAACAACTACTT  150

seq1  GCCTGCCACTGACAGTCTAACTTTGTGCCTTTCACACCTCTTTGCCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCACTGACAGTCTAACTTTGTGCCTTTCACACCTCTTTGCCTTTC  200

seq1  CCTCCTCCAGGCAGCTGCAGAGATGTACAGATAGCCTGCCCTGGAGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCAGGCAGCTGCAGAGATGTACAGATAGCCTGCCCTGGAGTTTT  250

seq1  TCTTTTACACTTTAAAGATGCTGTCCTGGAGCTTCTGTTTGAGTTCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACACTTTAAAGATGCTGTCCTGGAGCTTCTGTTTGAGTTCCCTC  300

seq1  TTAAGTTCTCTTATTAATGAGACTCTGGTTGCTCTGGCATCAACAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCTCTTATTAATGAGACTCTGGTTGCTCTGGCATCAACAGGACT  350

seq1  GGAGTCAGTTACCAAGTGTATGTTTGTGTGTCTGTGATCTATCTACTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCAGTTACCAAGTGTATGTTTGTGTGTCTGTGATCTATCTACTCAA  400

seq1  TGGGTCTTTTGATGAAACACGAGAACCTACAAGACATCTAGATCTTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTTTTGATGAAACACGAGAACCTACAAGACATCTAGATCTTGCTC  450

seq1  TCCACTAAAATCAAACACTGCTCCTTGGAGAAATGATTCTAGTTCTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTAAAATCAAACACTGCTCCTTGGAGAAATGATTCTAGTTCTGAGG  500

seq1  AGAGAATGTACAAAGGAATGTAAAAATGTCAGGGATGGAGGAAGAAATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGTACAAAGGAATGTAAAAATGTCAGGGATGGAGGAAGAAATGT  550

seq1  GAAGGACAGTTTGAAAGCACTTGAAATGCATGACAGTAAGGAATATGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACAGTTTGAAAGCACTTGAAATGCATGACAGTAAGGAATATGAAT  600

seq1  GAAGGAATCTGTTAAGTCACTGGTAATTAACACAACAATGATAACATGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATCTGTTAAGTCACTGGTAATTAACACAACAATGATAACATGGA  650

seq1  CAACAAAACCTACCTGGGCCAGTGAGTAAATCTGAAAGAGATGTCAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAACCTACCTGGGCCAGTGAGTAAATCTGAAAGAGATGTCAGAAC  700

seq1  CAGGAGATAATAATCATGGGCCAGAGAGATGGCTCACTTACAACAGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATAATAATCATGGGCCAGAGAGATGGCTCACTTACAACAGTGTG  750

seq1  AGATCAGGAAGCCCTGAGTTTAAGTCCCAGCAGTTACATAACAAACTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGAAGCCCTGAGTTTAAGTCCCAGCAGTTACATAACAAACTTAC  800

seq1  TGGAGAACATACTTATTAGAAAAAGAACAATCTTGCCATAAATGGTGAAC  850
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGAGAACATACTTATTAG-AAAAGAACAATCTTGCCATAAATGGTGAAC  849

seq1  CCGAGTCTCACCATGAAGAAACAAAGAAATCCAAAATTTGGGAATATTCT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCGAGTCTCACCATGAAGAAACAAAGAAATCCAAAA-TTGGGAATATTCT  898

seq1  ACACAGTGACTAATTT-GGTTTCTTAGATAATGTCCAGTGATATGAAAGA  949
      || ||||||||||||| |||||||   |||||||||||||||||||||||
seq2  ACCCAGTGACTAATTTGGGTTTCTAGAATAATGTCCAGTGATATGAAAGA  948

seq1  AAAAAAGCAAAAATCATGAACAGGCAGGGGAAACAGGAGTGACATAGATG  999
      | |||||| ||||||||||||||||| |||||||| ||||||| ||||||
seq2  ATAAAAGC-AAAATCATGAACAGGCA-GGGAAACA-GAGTGAC-TAGATG  994

seq1  TCTCAGCAATTAAGGGCACTTGCTGTTCATGCAGAGGACTTGAGTTTGGT  1049
      ||||||| ||||   |||||  ||| ||||||| | ||||||| ||    
seq2  TCTCAGC-ATTA---GCACTGCCTG-TCATGCA-AAGACTTGAATT---G  1035

seq1  TCTCA-GCACCTATATGGTGGTTCACAACCATCTGTAACTCCAGGCCTGG  1098
      ||||| ||||||| |||   |||| ||| ||||||||||| |||||    
seq2  TCTCAGGCACCTA-ATG--TGTTC-CAA-CATCTGTAACTTCAGGC---T  1077

seq1  GGGATCTGCCACCCTCTTC  1117
      | |||||||||||||||||
seq2  GAGATCTGCCACCCTCTTC  1096