BAC Information

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BAC

Clone NameB6Ng01-195G24
Chromosome13 (Build37)
Map Location 114,869,906 - 114,984,438
singlet/doubletdoublet
Overlap geneArl15, A430090L17Rik
Upstream geneCdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3, EG632832, LOC622701, LOC100040927
Downstream geneNdufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195G24.bB6Ng01-195G24.g
ACCGA017856GA017857
length1461,075
definitionB6Ng01-195G24.b B6Ng01-195G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,984,293 - 114,984,438)(114,869,906 - 114,870,978)
sequence
ttcagctatgcagcttatgacttttactcaggactggcaataaatatcca
cgttttcaggaccagtcttgggaataaagttaatacagaggaagaaagga
ggaagaaaggaagaagagaacgaggaagaggagggggagggggagg
gaattctgtttaagaatgttgtttcgtaaggtggaaaggccaggaaggtg
gggcatgttggtggtggtataacatttaagtgtacaataatcaagcacag
ttgatgtagacagttgcatgggctaacactggtttctgcagtgttgggag
cactcctaaagttgtccaggtaacgtttgtattccagccattctccgtaa
ggagatgagctaaacttcatgttctgttcttgggaaatcccttacattgg
aagcagaacagacctcgagtgggccctgctgtcaatggagctggattcta
cacgggcaaaggaaagttgctgggcagtccccgtaattaaaggaagtagc
gtagcctagctacaaacccagtttcttcccagttctgggtcttgaagaga
tcatgagaatgattttggccacaaagaagcaagttacaaagtcagaattc
aagttgagataagcaaatttaccatagagtaatgcaatctttaaaataaa
ataaaataaaataaaaaatttactgttgatttaacagtgatttaaaaaaa
aaaaacacatagcccccacccaaaaaaattggttaaagaatacatttgtc
aggaaattggaaaaggccaattagccactggtagctatgtgggtaattac
acacacacacacacacaaataaataaataaataaataagtaaatggaagt
aattcagcaacattttttaagttagtttattaatatttattattataata
taatattagtatgtgtgtgcacatctacatgcatgcacgtattcaggact
gcatgtatatgcacacatgcatgagccaggagagggagggccttggatcc
ccagagctggagttccagcatactggggatctgcctgacttgggtgtggg
aatggagctgcagtcttgtggggagagcagcatgtgctcctagctacagc
ggttatctcctactctgactctcttacacgaggagctgattacagaggtg
gatatagcataggttcctcagacagggtaacgggggaaagccacgtctac
ggcgtcaaccgtgtgcactgaaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_114984293_114984438
seq2: B6Ng01-195G24.b_47_192 (reverse)

seq1  CCTCCCCCTCCCCCTCCTCTTCCTCGTTCTCTTCTTCCTTTCTTCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTCCCCCTCCTCTTCCTCGTTCTCTTCTTCCTTTCTTCCTCCT  50

seq1  TTCTTCCTCTGTATTAACTTTATTCCCAAGACTGGTCCTGAAAACGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTGTATTAACTTTATTCCCAAGACTGGTCCTGAAAACGTGGA  100

seq1  TATTTATTGCCAGTCCTGAGTAAAAGTCATAAGCTGCATAGCTGAA  146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTGCCAGTCCTGAGTAAAAGTCATAAGCTGCATAGCTGAA  146

seq1: chr13_114869906_114870978
seq2: B6Ng01-195G24.g_64_1138

seq1  GAATTCTGTTTAAGAATGTTGTTTCGTAAGGTGGAAAGGCCAGGAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTAAGAATGTTGTTTCGTAAGGTGGAAAGGCCAGGAAGGTG  50

seq1  GGGCATGTTGGTGGTGGTATAACATTTAAGTGTACAATAATCAAGCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGTTGGTGGTGGTATAACATTTAAGTGTACAATAATCAAGCACAG  100

seq1  TTGATGTAGACAGTTGCATGGGCTAACACTGGTTTCTGCAGTGTTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTAGACAGTTGCATGGGCTAACACTGGTTTCTGCAGTGTTGGGAG  150

seq1  CACTCCTAAAGTTGTCCAGGTAACGTTTGTATTCCAGCCATTCTCCGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTAAAGTTGTCCAGGTAACGTTTGTATTCCAGCCATTCTCCGTAA  200

seq1  GGAGATGAGCTAAACTTCATGTTCTGTTCTTGGGAAATCCCTTACATTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGAGCTAAACTTCATGTTCTGTTCTTGGGAAATCCCTTACATTGG  250

seq1  AAGCAGAACAGACCTCGAGTGGGCCCTGCTGTCAATGGAGCTGGATTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAACAGACCTCGAGTGGGCCCTGCTGTCAATGGAGCTGGATTCTA  300

seq1  CACGGGCAAAGGAAAGTTGCTGGGCAGTCCCCGTAATTAAAGGAAGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGCAAAGGAAAGTTGCTGGGCAGTCCCCGTAATTAAAGGAAGTAGC  350

seq1  GTAGCCTAGCTACAAACCCAGTTTCTTCCCAGTTCTGGGTCTTGAAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTAGCTACAAACCCAGTTTCTTCCCAGTTCTGGGTCTTGAAGAGA  400

seq1  TCATGAGAATGATTTTGGCCACAAAGAAGCAAGTTACAAAGTCAGAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGAATGATTTTGGCCACAAAGAAGCAAGTTACAAAGTCAGAATTC  450

seq1  AAGTTGAGATAAGCAAATTTACCATAGAGTAATGCAATCTTTAAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGAGATAAGCAAATTTACCATAGAGTAATGCAATCTTTAAAATAAA  500

seq1  ATAAAATAAAATAAAAAATTTACTGTTGATTTAACAGTGATTTAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAATAAAAAATTTACTGTTGATTTAACAGTGATTTAAAAAAA  550

seq1  AAAAACACATAGCCCCCACCCAAAAAAATTGGTTAAAGAATACATTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACATAGCCCCCACCCAAAAAAATTGGTTAAAGAATACATTTGTC  600

seq1  AGGAAATTGGAAAAGGCCAATTAGCCACTGGTAGCTATGTGGGTAATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATTGGAAAAGGCCAATTAGCCACTGGTAGCTATGTGGGTAATTAC  650

seq1  ACACACACACACACACAAATAAATAAATAAATAAATAAGTAAATGGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAAATAAATAAATAAATAAATAAGTAAATGGAAGT  700

seq1  AATTCAGCAACATTTTTTAAGTTAGTTTATTAATATTTATTATTATAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCAACATTTTTTAAGTTAGTTTATTAATATTTATTATTATAATA  750

seq1  TAATATTAGTATGTGTGTGCACATCTACATGCATGCACGTATTCAGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAGTATGTGTGTGCACATCTACATGCATGCACGTATTCAGGACT  800

seq1  GCATGTATATGCACACATGCATGAGCCAGGAGAGGGAGGGCCTTGGATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATATGCACACATGCATGAGCCAGGAGAGGGAGGGCCTTGGATCC  850

seq1  CCAGAGCTGGAGTTCCAGCATACT-GGGATCTGCCTGACTTGGGTGTTGG  899
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  CCAGAGCTGGAGTTCCAGCATACTGGGGATCTGCCTGACTTGGGTG-TGG  899

seq1  GAATGGAGCTGCAGTCTTGT-GGGAGAGCAGCATGTGCTCCTAGCTACAG  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAATGGAGCTGCAGTCTTGTGGGGAGAGCAGCATGTGCTCCTAGCTACAG  949

seq1  C-GTTATCTCCTACTCTGACTCTCTTACAACGAGGAAGCTGA-TACAGAG  996
      | |||||||||||||||||||||||||| |||||| |||||| |||||||
seq2  CGGTTATCTCCTACTCTGACTCTCTTAC-ACGAGG-AGCTGATTACAGAG  997

seq1  GT-GATATAGCATTAGTTCCTCAGACAGGGAAAGGGGGGAAAGCCACGTC  1045
      || ||||||||||  ||||||||||||||| || ||||||||||||||||
seq2  GTGGATATAGCATAGGTTCCTCAGACAGGGTAACGGGGGAAAGCCACGTC  1047

seq1  -ACGGCGTCAACCGTGTGCACCTGAAGGC  1073
       ||||||||||||||||||| ||||||||
seq2  TACGGCGTCAACCGTGTGCA-CTGAAGGC  1075