BAC Information

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BAC

Clone NameB6Ng01-195P03
Chromosome13 (Build37)
Map Location 21,207,246 - 21,366,721
singlet/doubletdoublet
Overlap geneOlfr1369-ps1, Olfr42, Olfr1368, Trim27
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah, Olfr1370
Downstream geneGpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-195P03.bB6Ng01-195P03.g
ACCGA018225GA018226
length1,2131,030
definitionB6Ng01-195P03.b B6Ng01-195P03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,207,246 - 21,208,441)(21,365,715 - 21,366,721)
sequence
gaattccagatcctgagataagactcaactcttcaaggtcacatagaaaa
aaagaatgtctagaattaaactcatttgatatcaaagaattttcaacagg
gtacaagagaagttgactataataggcaacttgtatacattaattctttc
aattattaacctaacttcttccactgcagctaattctgtatcttaccagt
tacttccataggctaactaacaatttatttcttgttctccttgtcaccct
gcctactactttccctctatctccctctcttactcttcttactgtagatt
ataaagactgaaagactatggacccaagcaattacagtactttgcatgtt
tttatcctgcttggattctctgaccaccctcacctggaaatgatcctctc
tggagttgtcaccttcttttacattattacactggtgggtaacactgcta
taattcttgcatccctcctggatccccatctccatacaccaatgtacttt
ttcctcaggaatttatctttcctggatttgtgttacacaacaagcattgt
ccctcagatgctggttaacttgtggggacccgaaaagaccattagctctg
tgggctgtattgttcagctctatgtgtatatgtggctgggctccattgag
tgtctgctcctagctgtcatgtcctatgatcgtttcacagctatttgtaa
gcccttgcattatttggtaatcatgaatccacgtctatgtgtcaagatga
tagtcatggtctggggtattagtttggccaactctgtaatattatgcaca
ctcactgtgaatttgcctcgatgtggacataacatccctggaccacttcc
tgtgtgagttgccagccatggtcaggatagcttgtgtggacaccaacaaa
agttgaattatctgttttttgcttctaggcatggtcattgtccttacacc
tctcatcctaatcttatttcctaatggctacatagcccaaactggtgctc
acatgaagtcaaagggcagggcaacaaaaagcaatggataccctggtgga
tcccaatcctcacttggtggtcctccatatttctattggaaagtattatc
ttacctggtaccctaacatccggtaacagggccctcttaggaccaagggc
agggtcctcactctttttacacaccatcatacctcaagtctagcccctca
ttacaccctaagg
gaattctgcagatgatggtgttgtttatctataatcccagcagtcaggag
gctgaggccgggagtatgggacctcgctctgtagccctgtggaggtttct
tcaacgactgctgcagaaactcaagtggaaaaatactttgacaaagctat
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagagagagagagagagagagagagagagagagagagaaaggaa
ggaaggaaggaaggaagaaaggaagaaagaaaggaagaaagaaagagaaa
gaaaggaagaaagaaaggaagaaagagaaagaaagagaaagaaagagaaa
gaaaggaagaaaggaaagatagagaaagagagaaagagagagaaagagag
aaagaaagacaatcaacctaatatgaccaagtcactgatctccatggtcc
cagggagtcccacagaataaataagacgcttttggaggcagttgtttcaa
taaaagtctctcatgaagattctaaaacacttcattctgccctaaatcac
ttgctgttcgctgtttctctttatctctttgccacagagagttgtgtttg
tatgtttagttttatctctcttgctttggaattgttttgtaacaggaaga
gtcaggacttgttatcagatccagaatattcttaccattgatctagcgat
cacctgttctctgccctctctcatgagcaggtgacagaactcttcagtct
ttcctccgttactgtaattcttctatgatatcccctttccttatctgttt
ggctttcgagatacttcctgttagctctgacaaaagattaactgagtcac
ttaaattttaaacattgggatcacataacagaatacaatgtgcaagtccc
tcaacacggtgcatggataaacttccctgtagaacatcaacccatcctat
ggagcagaagtacagaaccttaatggctctgccaatggccaatccttcct
tccccttctacctctgctaaggttcctctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21207246_21208441
seq2: B6Ng01-195P03.b_49_1261

seq1  GAATTCCAGATCCTGAGATAAGACTCAACTCTTCAAGGTCACATAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATCCTGAGATAAGACTCAACTCTTCAAGGTCACATAGAAAA  50

seq1  AAAGAATGTCTAGAATTAAACTCATTTGATATCAAAGAATTTTCAACAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGTCTAGAATTAAACTCATTTGATATCAAAGAATTTTCAACAGG  100

seq1  GTACAAGAGAAGTTGACTATAATAGGCAACTTGTATACATTAATTCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGAGAAGTTGACTATAATAGGCAACTTGTATACATTAATTCTTTC  150

seq1  AATTATTAACCTAACTTCTTCCACTGCAGCTAATTCTGTATCTTACCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAACCTAACTTCTTCCACTGCAGCTAATTCTGTATCTTACCAGT  200

seq1  TACTTCCATAGGCTAACTAACAATTTATTTCTTGTTCTCCTTGTCACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCATAGGCTAACTAACAATTTATTTCTTGTTCTCCTTGTCACCCT  250

seq1  GCCTACTACTTTCCCTCTATCTCCCTCTCTTACTCTTCTTACTGTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTACTTTCCCTCTATCTCCCTCTCTTACTCTTCTTACTGTAGATT  300

seq1  ATAAAGACTGAAAGACTATGGACCCAAGCAATTACAGTACTTTGCATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGACTGAAAGACTATGGACCCAAGCAATTACAGTACTTTGCATGTT  350

seq1  TTTATCCTGCTTGGATTCTCTGACCACCCTCACCTGGAAATGATCCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCCTGCTTGGATTCTCTGACCACCCTCACCTGGAAATGATCCTCTC  400

seq1  TGGAGTTGTCACCTTCTTTTACATTATTACACTGGTGGGTAACACTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTGTCACCTTCTTTTACATTATTACACTGGTGGGTAACACTGCTA  450

seq1  TAATTCTTGCATCCCTCCTGGATCCCCATCTCCATACACCAATGTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTGCATCCCTCCTGGATCCCCATCTCCATACACCAATGTACTTT  500

seq1  TTCCTCAGGAATTTATCTTTCCTGGATTTGTGTTACACAACAAGCATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGGAATTTATCTTTCCTGGATTTGTGTTACACAACAAGCATTGT  550

seq1  CCCTCAGATGCTGGTTAACTTGTGGGGACCCGAAAAGACCATTAGCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGATGCTGGTTAACTTGTGGGGACCCGAAAAGACCATTAGCTCTG  600

seq1  TGGGCTGTATTGTTCAGCTCTATGTGTATATGTGGCTGGGCTCCATTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTATTGTTCAGCTCTATGTGTATATGTGGCTGGGCTCCATTGAG  650

seq1  TGTCTGCTCCTAGCTGTCATGTCCTATGATCGTTTCACAGCTATTTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTCCTAGCTGTCATGTCCTATGATCGTTTCACAGCTATTTGTAA  700

seq1  GCCCTTGCATTATTTGGTAATCATGAATCCACGTCTATGTGTCAAGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGCATTATTTGGTAATCATGAATCCACGTCTATGTGTCAAGATGA  750

seq1  TAGTCATGGTCTGGGGTATTAGTTTGGCCAACTCTGTAATATTATGCACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATGGTCTGGGGTATTAGTTTGGCCAACTCTGTAATATTATGCACA  800

seq1  CTCACTGTGAATTTGCCTCGATGTGGACATAACAT-CCTGGACCACTTCC  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCACTGTGAATTTGCCTCGATGTGGACATAACATCCCTGGACCACTTCC  850

seq1  TGTGTGAGTTGCCAGCCATGGTCAGGATAGCTTGTGTGGACACC-ACAAA  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTGTGAGTTGCCAGCCATGGTCAGGATAGCTTGTGTGGACACCAACAAA  900

seq1  AGTTGAATTATCTG-TTTTTGC-TCTAGGCATTGTCATTGTCCTTACACC  946
      |||||||||||||| ||||||| ||||||||| |||||||||||||||||
seq2  AGTTGAATTATCTGTTTTTTGCTTCTAGGCATGGTCATTGTCCTTACACC  950

seq1  TCTCATCCTTATTCTTATTTCCT-ATGGCTACATAGCCAAAACT-GTGCT  994
      |||||||| || ||||||||||| |||||||||||||| ||||| |||||
seq2  TCTCATCC-TAATCTTATTTCCTAATGGCTACATAGCCCAAACTGGTGCT  999

seq1  CAACATGAAGTCAAA-GGCAGGGCAACAAAAAGCAATGAATACC--TGTG  1041
      | ||||||||||||| |||||||||||||||||||||| |||||   |||
seq2  C-ACATGAAGTCAAAGGGCAGGGCAACAAAAAGCAATGGATACCCTGGTG  1048

seq1  GATCCCA--TCTCACT--GTGGT-CTCCATA-TTCTAT--GGAAGTATTA  1083
      |||||||   ||||||  ||||| ||||||| ||||||  | ||||||||
seq2  GATCCCAATCCTCACTTGGTGGTCCTCCATATTTCTATTGGAAAGTATTA  1098

seq1  TC-TACCT-GTA-CCTACAACCCGGTAACAGGG-CCTCTAAGGACC-AGG  1128
      || ||||| ||| ||||  | |||||||||||| ||||| |||||| |||
seq2  TCTTACCTGGTACCCTAACATCCGGTAACAGGGCCCTCTTAGGACCAAGG  1148

seq1  GCAAGTTCCTCACCCTTTTT-TACACCATCATCACTCCAAGTCTCAACCC  1177
      ||| | ||||||| ||||||  |||||||||| ||  |||||||  | ||
seq2  GCAGGGTCCTCACTCTTTTTACACACCATCAT-ACCTCAAGTCT--AGCC  1195

seq1  CCTCATTTACACCCTAAGG  1196
      ||||| |||||||||||||
seq2  CCTCA-TTACACCCTAAGG  1213

seq1: chr13_21365715_21366721
seq2: B6Ng01-195P03.g_65_1094 (reverse)

seq1  AAGAG--ACCTTAGCAGA-GTAGAGGGAGAAGGA-----TGGCCATTGGC  42
      |||||  ||||||||||| ||||| || ||||||     |||||||||||
seq2  AAGAGGAACCTTAGCAGAGGTAGAAGGGGAAGGAAGGATTGGCCATTGGC  50

seq1  AGAGCCACTAAG--TCTGTAC-TCTGCT-CATAGGATGGG-TGATG-TCT  86
      ||||||| ||||  ||||||| |||||| ||||||||||| ||||| |||
seq2  AGAGCCATTAAGGTTCTGTACTTCTGCTCCATAGGATGGGTTGATGTTCT  100

seq1  ACAGGG-AGTTTATCCATGCACCGTGTTGAGGGACTTGCACA-TGTATTC  134
      |||||| ||||||||||||||||||||||||||||||||||| |||||||
seq2  ACAGGGAAGTTTATCCATGCACCGTGTTGAGGGACTTGCACATTGTATTC  150

seq1  TGTTATGTGATCCCAATGTTTAAAATTTAAGTGACTCAGTTAATCTTTTG  184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGTGATCCCAATGTTTAAAATTTAAGTGACTCAGTTAATCTTTTG  200

seq1  TTCAGAGCTAACAGGAAGTATCTCGAAAGCCAAACAGATAAGGAAAGGGG  234
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCAGAGCTAACAGGAAGTATCTCGAAAGCCAAACAGATAAGGAAAGGGG  249

seq1  ATATCATAGAAGAATTACAGTAACGGAGGAAAGACTGAAGAGTTCTGTCA  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATAGAAGAATTACAGTAACGGAGGAAAGACTGAAGAGTTCTGTCA  299

seq1  CCTGCTCATGAGAGAGGGCAGAGAACAGGTGATCGCTAGATCAATGGTAA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCATGAGAGAGGGCAGAGAACAGGTGATCGCTAGATCAATGGTAA  349

seq1  GAATATTCTGGATCTGATAACAAGTCCTGACTCTTCCTGTTACAAAACAA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTCTGGATCTGATAACAAGTCCTGACTCTTCCTGTTACAAAACAA  399

seq1  TTCCAAAGCAAGAGAGATAAAACTAAACATACAAACACAACTCTCTGTGG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGCAAGAGAGATAAAACTAAACATACAAACACAACTCTCTGTGG  449

seq1  CAAAGAGATAAAGAGAAACAGCGAACAGCAAGTGATTTAGGGCAGAATGA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGATAAAGAGAAACAGCGAACAGCAAGTGATTTAGGGCAGAATGA  499

seq1  AGTGTTTTAGAATCTTCATGAGAGACTTTTATTGAAACAACTGCCTCCAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTAGAATCTTCATGAGAGACTTTTATTGAAACAACTGCCTCCAA  549

seq1  AAGCGTCTTATTTATTCTGTGGGACTCCCTGGGACCATGGAGATCAGTGA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTCTTATTTATTCTGTGGGACTCCCTGGGACCATGGAGATCAGTGA  599

seq1  CTTGGTCATATTAGGTTGATTGTCTTTCTTTCTCTCTTTCTCTCTCTTTC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCATATTAGGTTGATTGTCTTTCTTTCTCTCTTTCTCTCTCTTTC  649

seq1  TCTCTTTCTCTATCTTTCCTTTCTTC----------CTTTCTTTCTCTTT  674
      ||||||||||||||||||||||||||          ||||||||||||||
seq2  TCTCTTTCTCTATCTTTCCTTTCTTCCTTTCTTTCTCTTTCTTTCTCTTT  699

seq1  CTTTCTCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTTTCTTTCTTCCT  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTTCTTCCTTTCTTTCTTCCTTTCTTTCTCTTTCTTTCTTCCT  749

seq1  TTCTTTCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTTTCTCTCTCTCTCT  774
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  TTCTTTCTTCCTTTCTTCCTTCCTTCCTTCCTTCCTT--TCTCTCTCTCT  797

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCT  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCT  847

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTATAGCTTTGTCAAAGTA  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTATAGCTTTGTCAAAGTA  897

seq1  TTTTTCCACTTGAGTTTCTGCAGCAGTCGTTGAAGAAACCTCCACAGGGC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCACTTGAGTTTCTGCAGCAGTCGTTGAAGAAACCTCCACAGGGC  947

seq1  TACAGAGCGAGGTCCCATACTCCCGGCCTCAGCCTCCTGACTGCTGGGAT  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCGAGGTCCCATACTCCCGGCCTCAGCCTCCTGACTGCTGGGAT  997

seq1  TATAGATAAACAACACCATCATCTGCAGAATTC  1007
      |||||||||||||||||||||||||||||||||
seq2  TATAGATAAACAACACCATCATCTGCAGAATTC  1030