BAC Information

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BAC

Clone NameB6Ng01-197A22
Chromosome13 (Build37)
Map Location 45,135,668 - 45,136,645
singlet/doubletsinglet
Overlap genenone
Upstream geneA730030A06, EG637868, EG667157, Jarid2, Dtnbp1
Downstream geneHsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip, Gmpr, Atxn1, 5033430I15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197A22.bB6Ng01-197A22.g
ACCGA019029GA019030
length976991
definitionB6Ng01-197A22.b B6Ng01-197A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgttccccatttttaatagggttatttgattc
tctggagtctaagttcttgagttctttgtatatattggatattaaccctc
tatgggatgtaggattggtaaagatcttttaccagtctgttggttgccat
tttgtcctatattgacagtgttcttttgctttacagaagctttgcaattt
tatgagttcccatttgtcaattcttgatcttaaagcataagccactggtg
ttctgttcaggaacttttaccctttgcccacatgttcctgactttcccct
actttgtcttctattagattcggtgtatctggtttatgtggaggtttatg
ttgatcaacttggacttgagctttgtacagggagacaagaatggatcaat
ttgcattcttctacaagttgaccaccagttgaaacagcaccatttgttga
aaatgctgtcttttttccactggatggttttggctcctttgtcaatggtc
aagtgaccatatctgtgtgggttcatttctgggtcttcaattctgttcca
ctgatctacctgtctgtcattgtaccaatagcatgctgtttttatcacta
ttgttctgtagtatagcttgaggtcagggatggtgattctcccagaagtt
cttttattgttgagaatagttttcgctatcctaggttttttgttattcca
aatgaatttgagaattgctctttctaagcctatgaagaattgagttggaa
ttttgatgggaattgcattgaatctgtagattgctttcagcaagatggcc
atttttactattttaatcctgccaatccatgagcatgggaggtcttttcc
atcttctaaggtcttctttcgatttctttctttagagattgaagttcttg
tcatagagatctttcacttgttcggttagagtcccaccaagatactttac
attgttgtgcttatgtaagggtgttg

gaattcatactgccaactcacttcctgtgtaccctcttggcttcctgtgt
gacaaaatgtgatcagccagctccctgctctggctctctgctgccgtgtc
aaccctgccattacgagactctccctctggagccataagacaagataaag
tcattcatccattagtctaattcgtcatggtttatcacagcagcggatag
taactaaagcatctctcagtttagaccagtcagatttgggagccagcaga
cctatgtggccagaggctgggacagtttagcagtgtggttctgcagtttt
atctaaatgggactatgaggaagcagtctctttgggacacgctatagtga
tattgaagtgtgtctatgctgtggcctgcgttgggataattgccctaccg
agtggtcttctcgtgtctgatgggcagattcctctattctttccctgctt
acagacatctgttgttttttccctgcaaggttttggctatcataaataaa
tctgttatgaatattcatgcatcggattctgggcagatgtatgtttttac
ttcttagagagaaatgcttaagggtgggatggctgggtcgtctcctgtat
gtttaactttttacagcagtgtcaagcttttccaaagcagctgcaccatc
tcacgttcccaccagcaccgggaggagagcgcttcatggcccctttaata
cttggttttgtgagccttttattacatgtatttgtggcgtgtgcctatgt
gtgtgcatgagcacgtgtggcttagaggacacatttgccagactcagttc
tctctttttcccaggtgggtcaattatgccagggacatttgtttgtttga
ttatttgtttgttttgttttaagcttttctaagtaggatgtcgtagtaag
attgtgtttttttaatttttttcttcctagtgattaatggggggcataca
ccccccaccaaaacctagggcttttttttttcccagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_45135668_45136645
seq2: B6Ng01-197A22.g_68_1058

seq1  GAATTCATACTGCCAACTCACTTCCTGTGTACCCTCTTGGCTTCCTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACTGCCAACTCACTTCCTGTGTACCCTCTTGGCTTCCTGTGT  50

seq1  GACAAAATGTGATCAGCCAGCTCCCTGCTCTGGCTCTCTGCTGCCGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATGTGATCAGCCAGCTCCCTGCTCTGGCTCTCTGCTGCCGTGTC  100

seq1  AACCCTGCCATTACGAGACTCTCCCTCTGGAGCCATAAGACAAGATAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCCATTACGAGACTCTCCCTCTGGAGCCATAAGACAAGATAAAG  150

seq1  TCATTCATCCATTAGTCTAATTCGTCATGGTTTATCACAGCAGCGGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATCCATTAGTCTAATTCGTCATGGTTTATCACAGCAGCGGATAG  200

seq1  TAACTAAAGCATCTCTCAGTTTAGACCAGTCAGATTTGGGAGCCAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAAGCATCTCTCAGTTTAGACCAGTCAGATTTGGGAGCCAGCAGA  250

seq1  CCTATGTGGCCAGAGGCTGGGACAGTTTAGCAGTGTGGTTCTGCAGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTGGCCAGAGGCTGGGACAGTTTAGCAGTGTGGTTCTGCAGTTTT  300

seq1  ATCTAAATGGGACTATGAGGAAGCAGTCTCTTTGGGACACGCTATAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATGGGACTATGAGGAAGCAGTCTCTTTGGGACACGCTATAGTGA  350

seq1  TATTGAAGTGTGTCTATGCTGTGGCCTGCGTTGGGATAATTGCCCTACCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGTGTGTCTATGCTGTGGCCTGCGTTGGGATAATTGCCCTACCG  400

seq1  AGTGGTCTTCTCGTGTCTGATGGGCAGATTCCTCTATTCTTTCCCTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTTCTCGTGTCTGATGGGCAGATTCCTCTATTCTTTCCCTGCTT  450

seq1  ACAGACATCTGTTGTTTTTTCCCTGCAAGGTTTTGGCTATCATAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATCTGTTGTTTTTTCCCTGCAAGGTTTTGGCTATCATAAATAAA  500

seq1  TCTGTTATGAATATTCATGCATCGGATTCTGGGCAGATGTATGTTTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTATGAATATTCATGCATCGGATTCTGGGCAGATGTATGTTTTTAC  550

seq1  TTCTTAGAGAGAAATGCTTAAGGGTGGGATGGCTGGGTCGTCTCCTGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAGAGAAATGCTTAAGGGTGGGATGGCTGGGTCGTCTCCTGTAT  600

seq1  GTTTAACTTTTTACAGCAGTGTCAAGCTTTTCCAAAGCAGCTGCACCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAACTTTTTACAGCAGTGTCAAGCTTTTCCAAAGCAGCTGCACCATC  650

seq1  TCACGTTCCCACCAGCACCGGGAGGAGAGCGCTTCATGGCCCCTTTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTCCCACCAGCACCGGGAGGAGAGCGCTTCATGGCCCCTTTAATA  700

seq1  CTTGGTTTTGTGAGCCTTTTATTACATGTATTTGTGGCGTGTGCCTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTTGTGAGCCTTTTATTACATGTATTTGTGGCGTGTGCCTATGT  750

seq1  GTGTGCATGAGCACGTGTGGCTTAGAGGACACATTTGCCAGACTCAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATGAGCACGTGTGGCTTAGAGGACACATTTGCCAGACTCAGTTC  800

seq1  TCTCTTTTCCCCAGGTGGGTCAATTATGCCA-GGACATTTGTTTGTTTGA  849
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  TCTCTTTTTCCCAGGTGGGTCAATTATGCCAGGGACATTTGTTTGTTTGA  850

seq1  TTATTTGTTTGTTTTGTTTTTAGCTTTTCT-AGTA-GATGT-GTAGTAAG  896
      |||||||||||||||||||| ||||||||| |||| ||||| ||||||||
seq2  TTATTTGTTTGTTTTGTTTTAAGCTTTTCTAAGTAGGATGTCGTAGTAAG  900

seq1  ATTGTG--TTTTTAATTTTTT--TTCCTAGTGATTAATGGTG---CTAAA  939
      ||||||  |||||||||||||  ||||||||||||||||| |    || |
seq2  ATTGTGTTTTTTTAATTTTTTTCTTCCTAGTGATTAATGGGGGGCATACA  950

seq1  CACCCCCACAAAACCTGTGGCTTTTTTTTT--CCAGTGTGT  978
      | ||||  ||||||||  ||||||||||||  |||||||||
seq2  CCCCCCACCAAAACCTAGGGCTTTTTTTTTTCCCAGTGTGT  991


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