BAC Information

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BAC

Clone NameB6Ng01-198G22
Chromosome13 (Build37)
Map Location 67,099,435 - 67,234,801
singlet/doubletdoublet
Overlap geneZfp712, Zfp708, Zfp759
Upstream geneEG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1
Downstream geneRsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198G22.bB6Ng01-198G22.g
ACCGA020032GA020033
length1,1431,197
definitionB6Ng01-198G22.b B6Ng01-198G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,099,435 - 67,100,570)(67,233,614 - 67,234,801)
sequence
gaattcccagatgagagatttaaatcaatcatgaagaaaaactcgactca
ccgttattgctctgggtgaacacttgagttaagagccacccacagacttg
ctttctcagccagccacacatgtccactggtccaccccaagaggctatgg
caggccacagctctaaactttgccatagtgttccatgagcctgtttaaag
gggaacaaagaggtacctatcattcctcatccctcattttgcagttctgg
aattgaacttggggcctcttgtgtactagacacgggctctgctactgaga
tttggctctctcctcacattccatcaaacaaaacaggcttttttgggggg
gttttcaagacagggtttctctgtatagccctggctgtcctggaactcac
tttgtagaccaggcttgccttgaactcagaaatccacctgcctctgcctc
ccgagtgctgggattaaaggcatgcgccaccacgcccggccaaaacaggc
ttttatgaatatatttataacttttaaacattgctttgctttgcagatag
aagagtgttttatttctgtgcaattttgataagcctaaaattttgtattg
ctcatataggttgtatgagggtttccaagtttgttttccaggacagttca
gggactggcactgtgggactcatctagcgggtaggccaacccctctgaag
aggcacatgcccaacttctataattagacagaaagtgcctgtggagtgtg
caagaatcaaagcatacaaagcattatttctctatggctttgtaggaaac
agctaggaaagtccttagatactttccatgtgcattgaattcaaactttc
attttcactttgagaaagtgttttagctacggcaatgaggaaaccaacac
tgtgcataactgtgccgttttccccccacaccataccactggtcctagtc
taagtttctgccgacgtcttgggaaattgaccctaggtgattgaaagtag
agcgttatgttccagaggtatctgtagtgaggtgggtgactataagttca
tctcatgaccctcttgaaagattgctggctttaaagataccacagttcat
ggtgtaaagccaggaggaagatttgagtgttcttttctgtcaa
gaattcatagataaatggaaacaaattacactaaacacagtataatgaga
aaattaaccagtaagttcagtcaagtgggaacttataccaaatcaacact
ttcagaggccccatgaaaggacaaagggaactttagtgcgctgtcttcat
ccagccatggacttctccaggaaaatctgacagaggatacagtgccatga
aggagtcattgaggcagttaaaggggatcccacacttctcttgcgactgg
ggatatctgccctaaggctgctgtttctgaggtacccagtgctctcattg
cccacatcgtatgatttaggtctctggtgaacttggactttttttttttt
aatctaccagtacaatattgcatgctgtgcttttaaattgactttgtgtc
aactgtttatacaaaatatcctgttcccagctactgcttttgtcttcttt
aagccttttctttattttcagtccctggtccatccattccacactttgcc
atttgagatcttaaatcccttggattcaggacaacatcaggactctagca
ttccatcatcttatctaaattaagacgaataactattgatctatattcct
caaggtttcctagtcatgagattactggaataaaaattgtatctctcaca
tgatttacaactttagattcaacatctgactgagttggttagatttcttg
cttttaaacacaggattcctatgtgaatacagctgacctgcctaaacgtt
acttgtctgctacaatccaggaatagatttttggggacctcttatctctc
aagacaatctattttgcctaagcagacaacaccaggaaggggagactgca
gacctgcagggggctcctagagctgcatcaacttcctcattcccaagccc
ctcacctgttgctctaaaaggtccaagccaggtttctcccctcactcaat
tccccatctcatacttccaagtgagttggtgccccttctctatgtgtact
aacaacagccctatctcttattctcagcgctttcctaattttcttctctt
tgaactgagctccaatcttaacatcatctatattgtccaaaataacccat
attgcaatcttgtaagggccaccttgaataggtgtccaaatactacattg
ttaccacattccctggattatttttacctttttatggaactttaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67099435_67100570
seq2: B6Ng01-198G22.b_45_1187

seq1  GAATTCCCAGATGAGAGATTTAAATCAATCATGAAGAAAAACTCGACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGATGAGAGATTTAAATCAATCATGAAGAAAAACTCGACTCA  50

seq1  CCGTTATTGCTCTGGGTGAACACTTGAGTTAAGAGCCACCCACAGACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTATTGCTCTGGGTGAACACTTGAGTTAAGAGCCACCCACAGACTTG  100

seq1  CTTTCTCAGCCAGCCACACATGTCCACTGGTCCACCCCAAGAGGCTATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAGCCAGCCACACATGTCCACTGGTCCACCCCAAGAGGCTATGG  150

seq1  CAGGCCACAGCTCTAAACTTTGCCATAGTGTTCCATGAGCCTGTTTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACAGCTCTAAACTTTGCCATAGTGTTCCATGAGCCTGTTTAAAG  200

seq1  GGGAACAAAGAGGTACCTATCATTCCTCATCCCTCATTTTGCAGTTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAAAGAGGTACCTATCATTCCTCATCCCTCATTTTGCAGTTCTGG  250

seq1  AATTGAACTTGGGGCCTCTTGTGTACTAGACACGGGCTCTGCTACTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACTTGGGGCCTCTTGTGTACTAGACACGGGCTCTGCTACTGAGA  300

seq1  TTTGGCTCTCTCCTCACATTCCATCAAACAAAACAGGCTTTTTTGGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCTCTCCTCACATTCCATCAAACAAAACAGGCTTTTTTGGGGGG  350

seq1  GTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCAC  400

seq1  TTTGTAGACCAGGCTTGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGACCAGGCTTGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTC  450

seq1  CCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCCAAAACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTGCTGGGATTAAAGGCATGCGCCACCACGCCCGGCCAAAACAGGC  500

seq1  TTTTATGAATATATTTATAACTTTTAAACATTGCTTTGCTTTGCAGATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAATATATTTATAACTTTTAAACATTGCTTTGCTTTGCAGATAG  550

seq1  AAGAGTGTTTTATTTCTGTGCAATTTTGATAAGCCTAAAATTTTGTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGTTTTATTTCTGTGCAATTTTGATAAGCCTAAAATTTTGTATTG  600

seq1  CTCATATAGGTTGTATGAGGGTTTCCAAGTTTGTTTTCCAGGACAGTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATAGGTTGTATGAGGGTTTCCAAGTTTGTTTTCCAGGACAGTTCA  650

seq1  GGGACTGGCACTGTGGGACTCATCTAGCGGGTAGGCCAACCCCTCTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGGCACTGTGGGACTCATCTAGCGGGTAGGCCAACCCCTCTGAAG  700

seq1  AGGCACATGCCCAACTTCTATAATTAGACAGAAAGTGCCTGTGGAGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATGCCCAACTTCTATAATTAGACAGAAAGTGCCTGTGGAGTGTG  750

seq1  CAAGAATCAAAGCATACAAAGCATTATTTCTCTATGGCTTTGTAGGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCAAAGCATACAAAGCATTATTTCTCTATGGCTTTGTAGGAAAC  800

seq1  AGCTAGGAAAGTCCTTAGATACTTTCCATGTGCATTGAATTCAAACTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGAAAGTCCTTAGATACTTTCCATGTGCATTGAATTCAAACTTTC  850

seq1  ATTTTCACTTTGAGAAAGTGTTTTAGCTACGGCAATGAGGAAACCAACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACTTTGAGAAAGTGTTTTAGCTACGGCAATGAGGAAACCAACAC  900

seq1  TGTGCATAACTGTGCCGTTTT-CCCCCACACCATACCACTGGTCCTAGTC  949
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGTGCATAACTGTGCCGTTTTCCCCCCACACCATACCACTGGTCCTAGTC  950

seq1  TAAGTTTCTGCCGACGTCT--GGAAATTGACCCTAGGTTGATTGAAAGTA  997
      |||||||||||||||||||  |||||||||||||||| ||||||||||||
seq2  TAAGTTTCTGCCGACGTCTTGGGAAATTGACCCTAGG-TGATTGAAAGTA  999

seq1  GAGCG-TATGTTCCAGAGGTATCTGTTAGTGAG--TGGTGACTATAAG-T  1043
      ||||| ||||||||||||||||||| |||||||   |||||||||||| |
seq2  GAGCGTTATGTTCCAGAGGTATCTG-TAGTGAGGTGGGTGACTATAAGTT  1048

seq1  CATCTCATGACCCTCTTGAAAGATTGCTGGCTTTAAAGATACCACAGTTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGACCCTCTTGAAAGATTGCTGGCTTTAAAGATACCACAGTTC  1098

seq1  ATGGTGTAAAG-CAGGAGGAGATTTTGAGTG-TCTTTCTTGTCAA  1136
      ||||||||||| ||||||||   |||||||| |||||  ||||||
seq2  ATGGTGTAAAGCCAGGAGGAAGATTTGAGTGTTCTTTTCTGTCAA  1143

seq1: chr13_67233614_67234801
seq2: B6Ng01-198G22.g_68_1264 (reverse)

seq1  AATTAAA---TCATAAAA--GT-AAAATAAT-CAGGGAATTGTGGTA--C  41
      |||||||    |||||||  || |||||||| ||||||| |||||||   
seq2  AATTAAAGTTCCATAAAAAGGTAAAAATAATCCAGGGAA-TGTGGTAACA  49

seq1  ATGTAGTTAATTTTGGACA-CTATTCA--GTG--CCCTACAAGGATGCAA  86
      |||||||    |||||||| |||||||  |||  || ||||||  |||||
seq2  ATGTAGT---ATTTGGACACCTATTCAAGGTGGCCCTTACAAGATTGCAA  96

seq1  TAT-GGTTATTTTTGACAATATAGATGATGTT-AGATTTGGGAGCTCAGT  134
      ||| ||||||||| |||||||||||||||||| |||||  ||||||||||
seq2  TATGGGTTATTTTGGACAATATAGATGATGTTAAGATT--GGAGCTCAGT  144

seq1  CCAAAGAGAAGAAAATTAGGAAAGCGGCTGAGAATAAGAGATAGGGCTGT  184
       |||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  TCAAAGAGAAGAAAATTAGGAAAGC-GCTGAGAATAAGAGATAGGGCTG-  192

seq1  TTGTTAGTACACATAGAG-AGGGGCACCAACTCACTTGGAAGTATGAGAT  233
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTGTTAGTACACATAGAGAAGGGGCACCAACTCACTTGGAAGTATGAGAT  242

seq1  GGGGGATTGAGTGAGGGGAGAAACCTGGCTTGGACCTTTTAGAGCAACAG  283
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATTGAGTGAGGGGAGAAACCTGGCTTGGACCTTTTAGAGCAACAG  292

seq1  GTGAGGGGCTTGGGAATGAGGAAGTTGATGCAGCTCTAGGAGCCCCCTGC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGGCTTGGGAATGAGGAAGTTGATGCAGCTCTAGGAGCCCCCTGC  342

seq1  AGGTCTGCAGTCTCCCCTTCCTGGTGTTGTCTGCTTAGGCAAAATAGATT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGCAGTCTCCCCTTCCTGGTGTTGTCTGCTTAGGCAAAATAGATT  392

seq1  GTCTTGAGAGATAAGAGGTCCCCAAAAATCTATTCCTGGATTGTAGCAGA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGAGATAAGAGGTCCCCAAAAATCTATTCCTGGATTGTAGCAGA  442

seq1  CAAGTAACGTTTAGGCAGGTCAGCTGTATTCACATAGGAATCCTGTGTTT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAACGTTTAGGCAGGTCAGCTGTATTCACATAGGAATCCTGTGTTT  492

seq1  AAAAGCAAGAAATCTAACCAACTCAGTCAGATGTTGAATCTAAAGTTGTA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAGAAATCTAACCAACTCAGTCAGATGTTGAATCTAAAGTTGTA  542

seq1  AATCATGTGAGAGATACAATTTTTATTCCAGTAATCTCATGACTAGGAAA  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTGAGAGATACAATTTTTATTCCAGTAATCTCATGACTAGGAAA  592

seq1  CCTTGAGGAATATAGATCAATAGTTATTCGTCTTAATTTAGATAAGATGA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAGGAATATAGATCAATAGTTATTCGTCTTAATTTAGATAAGATGA  642

seq1  TGGAATGCTAGAGTCCTGATGTTGTCCTGAATCCAAGGGATTTAAGATCT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGCTAGAGTCCTGATGTTGTCCTGAATCCAAGGGATTTAAGATCT  692

seq1  CAAATGGCAAAGTGTGGAATGGATGGACCAGGGACTGAAAATAAAGAAAA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGCAAAGTGTGGAATGGATGGACCAGGGACTGAAAATAAAGAAAA  742

seq1  GGCTTAAAGAAGACAAAAGCAGTAGCTGGGAACAGGATATTTTGTATAAA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAAAGAAGACAAAAGCAGTAGCTGGGAACAGGATATTTTGTATAAA  792

seq1  CAGTTGACACAAAGTCAATTTAAAAGCACAGCATGCAATATTGTACTGGT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACACAAAGTCAATTTAAAAGCACAGCATGCAATATTGTACTGGT  842

seq1  AGATTAAAAAAAAAAAAGTCCAAGTTCACCAGAGACCTAAATCATACGAT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAAAAAAAAAAAGTCCAAGTTCACCAGAGACCTAAATCATACGAT  892

seq1  GTGGGCAATGAGAGCACTGGGTACCTCAGAAACAGCAGCCTTAGGGCAGA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAATGAGAGCACTGGGTACCTCAGAAACAGCAGCCTTAGGGCAGA  942

seq1  TATCCCCAGTCGCAAGAGAAGTGTGGGATCCCCTTTAACTGCCTCAATGA  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCAGTCGCAAGAGAAGTGTGGGATCCCCTTTAACTGCCTCAATGA  992

seq1  CTCCTTCATGGCACTGTATCCTCTGTCAGATTTTCCTGGAGAAGTCCATG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCATGGCACTGTATCCTCTGTCAGATTTTCCTGGAGAAGTCCATG  1042

seq1  GCTGGATGAAGACAGCGCACTAAAGTTCCCTTTGTCCTTTCATGGGGCCT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGAAGACAGCGCACTAAAGTTCCCTTTGTCCTTTCATGGGGCCT  1092

seq1  CTGAAAGTGTTGATTTGGTATAAGTTCCCACTTGACTGAACTTACTGGTT  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTGTTGATTTGGTATAAGTTCCCACTTGACTGAACTTACTGGTT  1142

seq1  AATTTTCTCATTATACTGTGTTTAGTGTAATTTGTTTCCATTTATCTATG  1183
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTCATTATACTGTGTTTAGTGTAATTTGTTTCCATTTATCTATG  1192

seq1  AATTC  1188
      |||||
seq2  AATTC  1197