BAC Information

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BAC

Clone NameB6Ng01-200D01
Chromosome13 (Build37)
Map Location 16,620,044 - 16,620,796
singlet/doubletsinglet
Overlap genenone
Upstream geneGli3, LOC665157, Inhba, LOC625181
Downstream geneLOC665191, 5033411D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200D01.bB6Ng01-200D01.g
ACCGA021322GA021323
length773756
definitionB6Ng01-200D01.b B6Ng01-200D01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccgagagttcaggcaatgtgttacagtgtcaaattccctaaaca
caatgtcttaggggctattgcatgaagctagaaacataaagcataaattg
catgttattcgagatgccacaaagacagtacatttggtatggaaaatcac
gtatttgaatcacttattttactttttaagagaaagcatatatattctac
aagtggcaggaaaagaaaggtgggtctactcaagctgttataaaacaaat
aacaccaggaaagggttagcaactggaaatctggaaatggggctaaaggg
tttgatgttttctccgcttagtttcatacttgctttggtgcagtatttcc
ctcttatcccccaattccttccatttagaatggaattgtttcctctgcac
tattgtatgttgagagtatgtaggatatatgtgtatatatatatatatat
atatatatatataacatacatactatactatatctctctgcggggaggag
aaaaccctccctaaaattggaagggagcgcgagaagagagatagatagtt
tacgcgtgtgtgtgtgttagtgcgtgtgaaagataacaactctctctcga
tctatatagatatagaggaaggcgctctccttgtgtgagactgttatatg
agagagagagtacacacatactctctctgtctcacacgcaaaatatacac
gctcgctcacacacaaaaaaaagtgagagacacgtgtgtgtccgtacaac
aatgtctgtctgtgtgctctagc
gaattctctgatttttccttatttcaataatgattgtgtatgtacaattt
tacaaagaaaatgaacttggtttcacagttagaaaaagagagctcagttg
taagtgtatgcagttttactaattaaaaatgtagatacacactcttcaaa
gataactaagaaagatgaattgatacatcggaattaaataactaactaaa
tatctaaccatgaagtaaataaaaccacacagaattttttttctgtatga
atgcaaaaatacatagctcatctcagtgctgttttctttctttctttctt
tctttctttctttctttctttctttctttctttctctctctctctttctc
tctttctctctttctctctttctctctttctctctttctctctctttctc
tctttctctctttctctcttcctctcttcctctctttctctctttctctc
tttctctctctctttctctctctttctctctttctctctctctttctctc
tctttctctctttctctctctctatctctctctttctctctctttctctc
tttctttctttctatctttctgtctttctttctttctttcttgctttctt
tctttcagatttatttatttattgccagtgcctggcaaatacagaagtgg
atgctcacagtcatctataagattcatccccgcaatggagaagctagaga
aagcaccccaaggagctgaaagggtctgcaacactataggtggaagctgc
ttatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_16620044_16620796
seq2: B6Ng01-200D01.g_68_823 (reverse)

seq1  ACATATGCAGC-TCCACCTATAGTGTTGCAGACCCTTTCAGCTCCTT-GG  48
      ||||| ||||| ||||||||||||||||||||||||||||||||||| ||
seq2  ACATAAGCAGCTTCCACCTATAGTGTTGCAGACCCTTTCAGCTCCTTGGG  50

seq1  GTGCTTTCTCTAGCTTCTCCATTG-GGGGATGAATCTTATAGATGACTGT  97
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTGCTTTCTCTAGCTTCTCCATTGCGGGGATGAATCTTATAGATGACTGT  100

seq1  GAGCATCCACTTCTGTATTTGCCAGGCACTGGCAATAAATAAATAAATCT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCCACTTCTGTATTTGCCAGGCACTGGCAATAAATAAATAAATCT  150

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  197
      ||||||||||||| |||||||||||||||||||| ||||||| |||||||
seq2  GAAAGAAAGAAAGCAAGAAAGAAAGAAAGAAAGACAGAAAGATAGAAAGA  200

seq1  AAGAAAGAGAGAAAGAGAGAGAAAGAGAGAGAAAGAGAGAGAGAAAGAGA  247
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAGAAAGAGAGAAAGAGAGAGAAAGAGAGAGATAGAGAGAGAGAAAGAGA  250

seq1  GAAAGAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAGAAAGAGAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAGAAAGAGAGAGAGAAAGAGAGAAAGAGAGAGAAAGAGAGA  300

seq1  GAGAAAGAGAGAAAGAGAGAAAGAGAGGAAGAGAGGAAGAGAGAAAGAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAAAGAGAGAAAGAGAGGAAGAGAGGAAGAGAGAAAGAGA  350

seq1  GAAAGAGAGAAAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAAAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGA  400

seq1  GAAAGAGAGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAAAGAGAGAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  450

seq1  GAAAGAAAGAAAGAAAGAAAGAAAACAGCACTGAGATGAGCTATGTATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAACAGCACTGAGATGAGCTATGTATTT  500

seq1  TTGCATTCATACAGAAAAAAAATTCTGTGTGGTTTTATTTACTTCATGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTCATACAGAAAAAAAATTCTGTGTGGTTTTATTTACTTCATGGT  550

seq1  TAGATATTTAGTTAGTTATTTAATTCCGATGTATCAATTCATCTTTCTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTTAGTTAGTTATTTAATTCCGATGTATCAATTCATCTTTCTTA  600

seq1  GTTATCTTTGAAGAGTGTGTATCTACATTTTTAATTAGTAAAACTGCATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTTTGAAGAGTGTGTATCTACATTTTTAATTAGTAAAACTGCATA  650

seq1  CACTTACAACTGAGCTCTCTTTTTCTAACTGTGAAACCAAGTTCATTTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACAACTGAGCTCTCTTTTTCTAACTGTGAAACCAAGTTCATTTTC  700

seq1  TTTGTAAAATTGTACATACACAATCATTATTGAAATAAGGAAAAATCAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAAATTGTACATACACAATCATTATTGAAATAAGGAAAAATCAGA  750

seq1  GAATTC  753
      ||||||
seq2  GAATTC  756