BAC Information

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BAC

Clone NameB6Ng01-203P23
Chromosome13 (Build37)
Map Location 86,630,368 - 86,631,413
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435373, LOC675662, Cox7c, LOC100042887, LOC100042893
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203P23.bB6Ng01-203P23.g
ACCGA024062GA024063
length1,0521,167
definitionB6Ng01-203P23.b B6Ng01-203P23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatacagagagaagacaatgtctcatagtagataattttatca
cataaacaaaaaatataaagacctatgaagaaaagtattctgaattgaac
tgaaacaaagaaagtgtttcttctggtgtgctcaggcctagtatacacct
tcaacccaagagtcttctgtaaacaaaaactaaacaacgtcaacgttagg
tcaggaggtgaagcaagcaaccagttgacagagagtgaacatgagaaaac
tcaggaaatataaaggactgtctttgtagatatgggtgctttagacagag
tggagcagacatttgtggattaggaagatctcctgtgtgctatctctgcc
tctctgaacaagcaggctttcagtctaggatctgttccctacatctttat
tggtaaatcaaacatttggatttaaagttttaaatcaacacataatatgt
aaacaaaatattagtcaggtaaaaataatgcccaagcaaagcattatgag
acaaaataattctctaaaaatgccattgaatttattactgctgggtgtgc
ggggcatacctgtaagtgggtccttatagtgaaattccattatagaaaac
taatccttgcttttcaagtggtttccttttgtagataatttcttgagtaa
gaatattagatcatattgctaaatcatggtttaataaacacacatgttat
atgctgaaataaaattaagacgtattttctcaattatttatcattttatg
gtaaaaaacacagtttctcccagtcatcatactgtgtgatagcttgtaag
gacttatgattattgactgtgcctatctcttcatacctaacatttctatt
ttattgttaacataatttatgactcctgaactttttaagcaaaataagca
atttttgtctttctttgttttggtttcttataatcattacctggttcatg
aagcattgttgaaaatgagatacttcattccctttacatagttataaatg
atcttaatgtatgtgttggtattattcctactcaactactaggtacatag
aa

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccacctccattg
ttggtgggattgcaggcttgtacaaccactctggaaatcagtctggcggt
tcctcagaaaattggacatagtactaccggaggatccagcaatacctctc
ctcggcatatatccagaagatgccccaactggtaagaaggacacatgctc
cactatgttcatagcagccttatttataatagccagaagctggaaagaac
ccagatgcccctcaacagaggaatggatacagaaaatgtggtacatctac
acaatggagtactactcagctattaaaaagaatgaatttatgaaattcct
agccaaatggatggacctggagagcatcatcctgagtgaggtaacacaat
cacaaaggaactcacacaatatgtactcactgataagtggatactagccc
aaaacctaggatacccacgatataagatacaatttcctaaacacatgaaa
ctcaagaaaaatgaagactgaagtgtggacactatgcccctccttagaag
tgggaacaaaacactattggaaggagttacagagacaaagtttggagctg
agatgaaaggatggaccatgtagagactgccatatccagggatccacccc
ataatcagcatccaaacgctgacaccattgcatacactagcaagatttta
tcgaaaggacccagatgtaggtgtctcctgtgagactatgcccggggcct
agcaaacacagaagtggatgctcacagtcagctaatgggatggatcacag
ggctcccaatggagagctagagaaagttccaaaggagctaagggatctgc
aacctatagttgatcacatatgaactacagtacccggagctcttgactct
agctgcatatgatccaaaggatgacttagtcgccattcacttgaaagaga
ggtccattggaactgcaaactttattgctagatatcagacctctaggtcc
acagaggggaagagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86630368_86631413
seq2: B6Ng01-203P23.b_43_1094

seq1  GAATTCTTATACAGAGAGAAGACAATGTCTCATAGTAGATAATTTTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATACAGAGAGAAGACAATGTCTCATAGTAGATAATTTTATCA  50

seq1  CATAAACAAAAAATATAAAGACCTATGAAGAAAAGTATTCTGAATTGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACAAAAAATATAAAGACCTATGAAGAAAAGTATTCTGAATTGAAC  100

seq1  TGAAACAAAGAAAGTGTTTCTTCTGGTGTGCTCAGGCCTAGTATACACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAAAGAAAGTGTTTCTTCTGGTGTGCTCAGGCCTAGTATACACCT  150

seq1  TCAACCCAAGAGTCTTCTGTAAACAAAAACTAAACAACGTCAACGTTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCAAGAGTCTTCTGTAAACAAAAACTAAACAACGTCAACGTTAGG  200

seq1  TCAGGAGGTGAAGCAAGCAACCAGTTGACAGAGAGTGAACATGAGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGTGAAGCAAGCAACCAGTTGACAGAGAGTGAACATGAGAAAAC  250

seq1  TCAGGAAATATAAAGGACTGTCTTTGTAGATATGGGTGCTTTAGACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAATATAAAGGACTGTCTTTGTAGATATGGGTGCTTTAGACAGAG  300

seq1  TGGAGCAGACATTTGTGGATTAGGAAGATCTCCTGTGTGCTATCTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCAGACATTTGTGGATTAGGAAGATCTCCTGTGTGCTATCTCTGCC  350

seq1  TCTCTGAACAAGCAGGCTTTCAGTCTAGGATCTGTTCCCTACATCTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAACAAGCAGGCTTTCAGTCTAGGATCTGTTCCCTACATCTTTAT  400

seq1  TGGTAAATCAAACATTTGGATTTAAAGTTTTAAATCAACACATAATATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAATCAAACATTTGGATTTAAAGTTTTAAATCAACACATAATATGT  450

seq1  AAACAAAATATTAGTCAGGTAAAAATAATGCCCAAGCAAAGCATTATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATATTAGTCAGGTAAAAATAATGCCCAAGCAAAGCATTATGAG  500

seq1  ACAAAATAATTCTCTAAAAATGCCATTGAATTTATTACTGCTGGGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAATTCTCTAAAAATGCCATTGAATTTATTACTGCTGGGTGTGC  550

seq1  GGGGCATACCTGTAAGTGGGTCCTTATAGTGAAATTCCATTATAGAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATACCTGTAAGTGGGTCCTTATAGTGAAATTCCATTATAGAAAAC  600

seq1  TAATCCTTGCTTTTCAAGTGGTTTCCTTTTGTAGATAATTTCTTGAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCTTGCTTTTCAAGTGGTTTCCTTTTGTAGATAATTTCTTGAGTAA  650

seq1  GAATATTAGATCATATTGCTAAATCATGGTTTAATAAACACACATGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTAGATCATATTGCTAAATCATGGTTTAATAAACACACATGTTAT  700

seq1  ATGCTGAAATAAAATTAAGACGTATTTTCTCAATTATTTATCATTTTATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAAATAAAATTAAGACGTATTTTCTCAATTATTTATCATTTTATG  750

seq1  GTAAAAAACACAGTTTCTCCCAGTCATCATACTGTGTGATAGCTTGTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAACACAGTTTCTCCCAGTCATCATACTGTGTGATAGCTTGTAAG  800

seq1  GACTTATGATTATTGACTGTGCCTATCTCTTCATACCTAACATTTCTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGATTATTGACTGTGCCTATCTCTTCATACCTAACATTTCTATT  850

seq1  TTATTGTTAACATAATTTATGACTCCTGAAC-TTTTAAGCAAAATAAGCA  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTATTGTTAACATAATTTATGACTCCTGAACTTTTTAAGCAAAATAAGCA  900

seq1  ATTTTTGTCTTTCTTTGTTTTGGTTTCTTATAATCATTACCT-GTTCATG  948
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTTTTGTCTTTCTTTGTTTTGGTTTCTTATAATCATTACCTGGTTCATG  950

seq1  AAGCATTGTTGAAAATGAGATACTTCATT-CCTTTACATAGTTATAAATG  997
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAGCATTGTTGAAAATGAGATACTTCATTCCCTTTACATAGTTATAAATG  1000

seq1  ATCTT-ATGTATGTGTT-GTATTATCCCTACTCAACTACTA-GTACATAG  1044
      ||||| ||||||||||| ||||||| ||||||||||||||| ||||||||
seq2  ATCTTAATGTATGTGTTGGTATTATTCCTACTCAACTACTAGGTACATAG  1050

seq1  AA  1046
      ||
seq2  AA  1052


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