BAC Information

Click to search

BAC

Clone NameB6Ng01-205J11
Chromosome13 (Build37)
Map Location 50,646,266 - 50,647,039
singlet/doubletsinglet
Overlap genenone
Upstream geneCenpp, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044
Downstream geneGm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205J11.bB6Ng01-205J11.g
ACCGA025232GA025233
length876616
definitionB6Ng01-205J11.b B6Ng01-205J11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gggaattctccttgtctaaaagaaataaaggaataaaaatggagaaaaga
ctgagggaaaggaggtccagtgaccagcccaaattggtataccactgaag
gggtcattacaaagcctgacactattactgatattacggtgtgcttgcaa
acagaagccagcagggctgccctctgagaggcccaacaagcaattgaaag
agtcagatgcagttacagtgaaccaaaggacagaggctgggcccttgtgg
ttgaattagggaaaggctggaagaagctgaggaagagggtgagcccatag
gaccccataggaagactagtagtctcaaacaaacttggccccccaagatc
tctcagacaacaagccacaaattaggcagcatatactaacttatatgagc
ttaccaacacttatacagcagacgactgcctggtctggcctcagtgaaat
ggatgtatctaaaccccaagacactttagtccccatggagtggggtaggc
tgggatgttgcaatatcttcatggagatgtggaaggaggaatggggtgag
gaactttcagagggcagactgagaagagtataacaactggattgtaaaaa
atattaagtactaatactaatacttcttaataaataaaaaacaaagacac
cattacatctgcaaacaaatagattgaaactagaaaatatcaacctgagt
gatgtaactcagattcagaaagacatgcatagtaaagtagtcactaacaa
gtggacattaactacaaatataaaatactattcctcaattaacagtcaga
gagacactgcagaacatggagggcccaagagaggatgattgaatcacatt
cagaagatgcaatccaatagatatca
gaattctcatcatttaatcatgttgaagtatgtgtgtttatgtggctgtg
tgagtatgtatgtgtgtgggggaacacacagagtctagaagggataactg
gtgtccttcctgctggaatcacaggcaattgagagctgtttgacctgggt
gatagaatctgggtgttatgcaagaacaggaagtgtaagtcgtcttaacc
actgaaatatcttgaagaataaagataaaaaattactgaactcttcctca
ccccagagcccgacccctcccatctagagattgttcccagaacactcctg
aactcttcaccccagaatgcattcctgaactcctcaccctagagttcgaa
ccctcccaactaaagactgttccaagaacatttttgagataagggcctcc
tggaacaacctcagaatgaaccgggtacattgccaaataataggacatga
ccccttagttacgtagaattcccttggcaaaaccccttgtcccttggcag
aaccccttagttatgcaaacttgtactttccctgccccgctctcccccct
tgagtttttcctatataagcctgtgaaaaatttggctcgaggtcgattct
cctctacagcatacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50646266_50647039
seq2: B6Ng01-205J11.b_149_923

seq1  GGTCATTACAAAGCCTGACACTATTACTGATATTACGGTGTGCTTGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTACAAAGCCTGACACTATTACTGATATTACGGTGTGCTTGCAAA  50

seq1  CAGAAGCCAGCAGGGCTGCCCTCTGAGAGGCCCAACAAGCAATTGAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCAGCAGGGCTGCCCTCTGAGAGGCCCAACAAGCAATTGAAAGA  100

seq1  GTCAGATGCAGTTACAGTGAACCAAAGGACAGAGGCTGGGCCCTTGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATGCAGTTACAGTGAACCAAAGGACAGAGGCTGGGCCCTTGTGGT  150

seq1  TGAATTAGGGAAAGGCTGGAAGAAGCTGAGGAAGAGGGTGAGCCCATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAGGGAAAGGCTGGAAGAAGCTGAGGAAGAGGGTGAGCCCATAGG  200

seq1  ACCCCATAGGAAGACTAGTAGTCTCAAACAAACTTGGCCCCCCAAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATAGGAAGACTAGTAGTCTCAAACAAACTTGGCCCCCCAAGATCT  250

seq1  CTCAGACAACAAGCCACAAATTAGGCAGCATATACTAACTTATATGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAACAAGCCACAAATTAGGCAGCATATACTAACTTATATGAGCT  300

seq1  TACCAACACTTATACAGCAGACGACTGCCTGGTCTGGCCTCAGTGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAACACTTATACAGCAGACGACTGCCTGGTCTGGCCTCAGTGAAATG  350

seq1  GATGTATCTAAACCCCAAGACACTTTAGTCCCCATGGAGTGGGGTAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATCTAAACCCCAAGACACTTTAGTCCCCATGGAGTGGGGTAGGCT  400

seq1  GGGATGTTGCAATATCTTCATGGAGATGTGGAAGGAGGAATGGGGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTTGCAATATCTTCATGGAGATGTGGAAGGAGGAATGGGGTGAGG  450

seq1  AACTTTCAGAGGGCAGACTGAGAAGAGTATAACAACTGGATTGTAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCAGAGGGCAGACTGAGAAGAGTATAACAACTGGATTGTAAAAAA  500

seq1  TATTAAGTACTAATACTAATACTTC-TAATAAATAAAAAACAAAGACACC  549
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATTAAGTACTAATACTAATACTTCTTAATAAATAAAAAACAAAGACACC  550

seq1  ATTACATTTGCAAACAAATAGA-TGAAACTAGAAAATATCAACCTGAGTG  598
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  ATTACATCTGCAAACAAATAGATTGAAACTAGAAAATATCAACCTGAGTG  600

seq1  ATGTAACACAGATTCAGAAAGACATGCATAGT-AAGTAGTCACTAACAAG  647
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  ATGTAACTCAGATTCAGAAAGACATGCATAGTAAAGTAGTCACTAACAAG  650

seq1  TGGACATTAACTACAAAATATAAAATAACTATTCCTCAATTAACAGTCAG  697
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  TGGACATTAACTAC-AAATATAAAAT-ACTATTCCTCAATTAACAGTCAG  698

seq1  AGAGACACTGCAGAACATGGAGGGCCCAAGAGAGGATGATTGAATCACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGCAGAACATGGAGGGCCCAAGAGAGGATGATTGAATCACAT  748

seq1  TCAGAAGAAGCAATCCAATAGACATCA  774
      |||||||| ||||||||||||| ||||
seq2  TCAGAAGATGCAATCCAATAGATATCA  775