BAC Information

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BAC

Clone NameB6Ng01-206F24
Chromosome13 (Build37)
Map Location 49,331,044 - 49,332,196
singlet/doubletsinglet
Overlap geneSusd3
Upstream geneId4, LOC667351, Zfp169, A830005F24Rik, AW456874, Barx1, Phf2, EG667415, BC010304, C030044B11Rik, Wnk2, Ninj1, 1110007C09Rik
Downstream geneFgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206F24.bB6Ng01-206F24.g
ACCGA025807GA025808
length1,169111
definitionB6Ng01-206F24.b B6Ng01-206F24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagctcagtgtggagtgaggtggggggcaccaaagagacaatg
ggtttgtactagttaggtcttttgttttgttctgtttttcaagagggttt
ctctgtacagccccttagttgtcttggaactccctttgtactgtgtagac
ctggctggcctcaaactcagatatctgctcgcctttgtctcccaagttct
gggatcaaaggtgtgagccaccatgctgggcttttgatagttagttttat
atcaacttgacataagctagaattatctgaaaggaagaaacttcaattga
gaagactcctccagaagatcaggctgtaaagtatttcttaattagtaatt
gatacaggaaggcccagctcgttgtgggtggggccattcctgagctagtg
gttctgggttctataagaaagcaagctgagcaagccagcaagcagcactc
ctccatggcctctgcatcagcttctgcctcctgcctcctgttcttgtcct
gacttccttcaatgacagatggtgatgtgaaagtgtaagccaaataaacc
ccttcttccacatcttgcttttgatgatggtgtttcaccacagtaacaga
aaccctaattcagacagggtatcaggctgtatgtcttcagccagaacatg
aaaccttcagcctaatccttagcatgaaggacagaagcctgtctccattt
aaagagccccaaaacctgacactgagcacaaaatcaggcacattaacacc
tgcagcaaccctggaagtgtcttctactctctcttacatcaaggtagcca
gaaaaggcatgtcctgggcctgaagctacagctcagttgacaagatgctc
attcagcatgcacaacgccctgggattcagtccctagcattgcacagatg
aagtatgccatctagcaaccccagcacttggaaaggtagaggtgggtgag
tcaggagtccaaggacatcctttggctgtgtagcaagcctgaggtcagcc
tgggctacaatggagaccctattagagacagaacgacaaatcacacagaa
cacacaaaggaagactgtgcttttactaggttcagggaaaagaatagaat
gcatcaagagaggaaagaagccataggcttgaacgcctacctgggtctag
gagaagagtgtgaggaatg
tcaggtttaccagcttctgttgtggaaaccttgctccttaatttaaaact
actggttaaataaaaatggctacagccaattactggagggggttagaggt
aggtggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_49331044_49332196
seq2: B6Ng01-206F24.b_44_1212

seq1  GAATTCACAGCTCAGTGTGGAGTGAGGTGGGGGGCACCAAAGAGACAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCTCAGTGTGGAGTGAGGTGGGGGGCACCAAAGAGACAATG  50

seq1  GGTTTGTACTAGTTAGGTCTTTTGTTTTGTTCTGTTTTTCAAGAGGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTACTAGTTAGGTCTTTTGTTTTGTTCTGTTTTTCAAGAGGGTTT  100

seq1  CTCTGTACAGCCCCTTAGTTGTCTTGGAACTCCCTTTGTACTGTGTAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTACAGCCCCTTAGTTGTCTTGGAACTCCCTTTGTACTGTGTAGAC  150

seq1  CTGGCTGGCCTCAAACTCAGATATCTGCTCGCCTTTGTCTCCCAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGCCTCAAACTCAGATATCTGCTCGCCTTTGTCTCCCAAGTTCT  200

seq1  GGGATCAAAGGTGTGAGCCACCATGCTGGGCTTTTGATAGTTAGTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAAAGGTGTGAGCCACCATGCTGGGCTTTTGATAGTTAGTTTTAT  250

seq1  ATCAACTTGACATAAGCTAGAATTATCTGAAAGGAAGAAACTTCAATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTGACATAAGCTAGAATTATCTGAAAGGAAGAAACTTCAATTGA  300

seq1  GAAGACTCCTCCAGAAGATCAGGCTGTAAAGTATTTCTTAATTAGTAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTCCTCCAGAAGATCAGGCTGTAAAGTATTTCTTAATTAGTAATT  350

seq1  GATACAGGAAGGCCCAGCTCGTTGTGGGTGGGGCCATTCCTGAGCTAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGGAAGGCCCAGCTCGTTGTGGGTGGGGCCATTCCTGAGCTAGTG  400

seq1  GTTCTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAGCAGCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGTTCTATAAGAAAGCAAGCTGAGCAAGCCAGCAAGCAGCACTC  450

seq1  CTCCATGGCCTCTGCATCAGCTTCTGCCTCCTGCCTCCTGTTCTTGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGGCCTCTGCATCAGCTTCTGCCTCCTGCCTCCTGTTCTTGTCCT  500

seq1  GACTTCCTTCAATGACAGATGGTGATGTGAAAGTGTAAGCCAAATAAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTTCAATGACAGATGGTGATGTGAAAGTGTAAGCCAAATAAACC  550

seq1  CCTTCTTCCACATCTTGCTTTTGATGATGGTGTTTCACCACAGTAACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCCACATCTTGCTTTTGATGATGGTGTTTCACCACAGTAACAGA  600

seq1  AACCCTAATTCAGACAGGGTATCAGGCTGTATGTCTTCAGCCAGAACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTAATTCAGACAGGGTATCAGGCTGTATGTCTTCAGCCAGAACATG  650

seq1  AAACCTTCAGCCTAATCCTTAGCATGAAGGACAGAAGCCTGTCTCCATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTCAGCCTAATCCTTAGCATGAAGGACAGAAGCCTGTCTCCATTT  700

seq1  AAAGAGCCCCAAAACCTGACACTGAGCACAAAATCAGGCACATTAACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCCCAAAACCTGACACTGAGCACAAAATCAGGCACATTAACACC  750

seq1  TGCAGCAACCCTGGAAGTGTCTTCTACTCTCTCTTACATCAAGGTAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAACCCTGGAAGTGTCTTCTACTCTCTCTTACATCAAGGTAGCCA  800

seq1  GAAAAGGCATGTCCTGGGCCTGAAGCTACAGCTCAGTTGACAAGATGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCATGTCCTGGGCCTGAAGCTACAGCTCAGTTGACAAGATGCTC  850

seq1  ATTCAGCATGCACAACGCCCT-GGATTCAGTCCCTAGCATTGCACAGATG  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATTCAGCATGCACAACGCCCTGGGATTCAGTCCCTAGCATTGCACAGATG  900

seq1  AAGTATGCCATCTAGCAACCCCAGCACTTGG-AAGGTAGAGGTGGGTGAG  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGTATGCCATCTAGCAACCCCAGCACTTGGAAAGGTAGAGGTGGGTGAG  950

seq1  TCAGGAGTCCAAGGACATCC-TTGGCTGTGTAGCAAGCCTGAGGTCAGCC  997
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCAGGAGTCCAAGGACATCCTTTGGCTGTGTAGCAAGCCTGAGGTCAGCC  1000

seq1  TGGGCTACA--TGAGACCCTATTAGAGACAGACAGACAAA-CACACAG-A  1043
      |||||||||   ||||||||||||||||||||  |||||| ||||||| |
seq2  TGGGCTACAATGGAGACCCTATTAGAGACAGAACGACAAATCACACAGAA  1050

seq1  CACACAAAGAAGGACTGTGCTTTTACTA-GTTCAGGAAAAAG-ATAGAAT  1091
      ||||||||| | |||||||||||||||| ||||||| ||||| |||||||
seq2  CACACAAAGGAAGACTGTGCTTTTACTAGGTTCAGGGAAAAGAATAGAAT  1100

seq1  GCATCAAGAGA-GAAAG-AGCCATA-GCT--GACGCCTAACTGGGGCTAG  1136
      ||||||||||| ||||| ||||||| |||   ||||||| ||||| ||||
seq2  GCATCAAGAGAGGAAAGAAGCCATAGGCTTGAACGCCTACCTGGGTCTAG  1150

seq1  GAG-AGAGTGAG-GGAATG  1153
      ||| |||||| | ||||||
seq2  GAGAAGAGTGTGAGGAATG  1169