BAC Information

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BAC

Clone NameB6Ng01-207N22
Chromosome13 (Build37)
Map Location 34,974,277 - 35,181,406
singlet/doubletdoublet
Overlap genePrpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
Upstream geneSerpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik, D0H6S2654E, EG432746, LOC666677
Downstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N22.bB6Ng01-207N22.g
ACCGA026904GA026905
length1,0411,083
definitionB6Ng01-207N22.b B6Ng01-207N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,180,365 - 35,181,406)(34,974,277 - 34,975,363)
sequence
gaattcatgaaattcttaggcaaatgggtggtgtctcaggtgacagctat
atcagtcctgtcagcaagcatttgttggcatccacaatagtgtctgggtt
tagtgattgtatatgggatggatccccaggtggggcagactctgtatggt
ctttgcttcagtctctgctccacactttgcctctgtatctcctcccatgg
gtattttgttctcccttctaagaaggactgaactatccatactttcgtct
tccttcttcttgagcttcatttggtctgtgagtcgtatcttatgtattct
gagcatctgggctaatatccacttatcagtgagtgtacaccatgtgtgtt
cttttgtgattgggttacctcactcaggatgatattttctagttccacca
tgaaagtcatgctagtcgtatagtcgattgatttttcatgtgattggact
gctacagcacacttgtccatgcacttgtctacagcagtccctgactatgc
cattcagcaaacccttcctatgcatttggcctctgtctgaggccagttcc
atttctgttcccccatcacagtgttgtgagaaagctaggaagtgttcacc
aggataccggaaccatgcttttaaacttctagaatggtaggtagagtaaa
tctcctttttaaataaaatatccagccttggatactttaatatacagaga
gaaaatggacaatgtcttattggcaagtcgtgggtagaaacctaggaagt
tgccaagcctcatacaattggcagttgtataataaaggttacctggtctc
acacatcagtagggcaaagaccagggagctctgtgtcagagccaaattca
taccaaattggtgccagctcaatgtcattttcataaacattcatgatttc
ttctgtcaattcttttaactcaaagctactattgtaaaattgaatgagag
tgaccctagagctcattattcttgaatgtttcaatctcagtaaatgcact
gtttatgatgggtatagccctgggtggaactggatgtggtg
gaattctacatcacaatccaaaggcaagcaggagactctgcagtcagcca
ggaggagactctcatctgccctaggcagagctaggagacctcaaagtcct
cctgcacagcaacgtacttcctccaacaaggccacacctaacagtgggcc
tcttactgtggaccaggcatattcaaaccaccacagttctcattccagct
agtttttcgaagtcttagaccatgggaattttttgtttgtgttgttacta
ctgtgctcttctgaagcttctgggggcacactaactactttggatttacc
caatattagctattgagtttttttttcaagaaggggtgtttaggtgagat
tgttcacagtaagtaaacaggtagattattgttgacaaccaagttttctg
agcatcaagtggaaagattaacttctcagtatgttagtatctatgcctta
tgaaaagagaatgtgagccttttgtatttgtgagaaatgctagtttaaaa
tcaaattactggagtttctgtgtaactaaaattaattggattttgttgct
ggtttgatttcagttaaataatgtttttcaaagccatattccataacata
tttcatgtaatacttttagattttaattcaggtattaaaacaggttgttg
tgtctccaccacctcagctctggtcatttgcctcctttaaataaaatacc
tgaaacttacaacattttagtggctcggttgtgttacactgagattcatt
ttatcattactgttgttataactgaatgctgggtaaatactgtgattgta
aaatgtgctttgtacattttataggatggatgatgctgataattcttgaa
aagagtgtaaatgaggaaaatggagagtatcagaagaccaatctcaaaat
aaacacagtcgtcacaaaaaaagaagcataacacagaagttaacataaga
aacttaaccttcctcaatagagatagggaataaaaacccaacctaagcat
aagctagtaagcaactatctgtaaagaagttatcgatgcttccgacaaag
agggccgtcccctgcaaataagaactaacttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_35180365_35181406
seq2: B6Ng01-207N22.b_46_1086 (reverse)

seq1  CACCACATCCA-TTCCA-CCAAGGCTATACCCATCATAAACAGTTGCATT  48
      ||||||||||| ||||| ||| ||||||||||||||||||||| ||||||
seq2  CACCACATCCAGTTCCACCCAGGGCTATACCCATCATAAACAG-TGCATT  49

seq1  AACTGGAGA-TGGAACATTCAAGAATATTGAGCTTCTAGGGGTCACTCTC  97
       ||| |||| || |||||||||||||| ||||| |||| |||||||||||
seq2  TACT-GAGATTGAAACATTCAAGAATAATGAGC-TCTA-GGGTCACTCTC  96

seq1  ATTCATTTTAACAATAGTAGCTTTGAGTTAAAAGAA-TGACAGAAGAAAT  146
      ||||| ||| |||||||||||||||||||||||||| |||||||||||||
seq2  ATTCAATTTTACAATAGTAGCTTTGAGTTAAAAGAATTGACAGAAGAAAT  146

seq1  CATGAATGTTTTATGAAAATGACATTTGAGCTGGCACCAATTTGGTATG-  195
      |||||||| ||||||||||||||| |||||||||||||||||||||||| 
seq2  CATGAATG-TTTATGAAAATGACA-TTGAGCTGGCACCAATTTGGTATGA  194

seq1  ATTTGGCTCTGACACAGAGCTCCCTGGTCTTTGCCCTACTGATGTGTGAG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTCTGACACAGAGCTCCCTGGTCTTTGCCCTACTGATGTGTGAG  244

seq1  ACCAGGTAACCTTTATTATACAACTGCCAATTGTATGAGGCTTGGCAACT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAACCTTTATTATACAACTGCCAATTGTATGAGGCTTGGCAACT  294

seq1  TCCTAGGTTTCTACCCACGACTTGCCAATAAGACATTGTCCATTTTCTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGTTTCTACCCACGACTTGCCAATAAGACATTGTCCATTTTCTCT  344

seq1  CTGTATATTAAAGTATCCAAGGCTGGATATTTTATTTAAAAAGGAGATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATATTAAAGTATCCAAGGCTGGATATTTTATTTAAAAAGGAGATTT  394

seq1  ACTCTACCTACCATTCTAGAAGTTTAAAAGCATGGTTCCGGTATCCTGGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACCTACCATTCTAGAAGTTTAAAAGCATGGTTCCGGTATCCTGGT  444

seq1  GAACACTTCCTAGCTTTCTCACAACACTGTGATGGGGGAACAGAAATGGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTTCCTAGCTTTCTCACAACACTGTGATGGGGGAACAGAAATGGA  494

seq1  ACTGGCCTCAGACAGAGGCCAAATGCATAGGAAGGGTTTGCTGAATGGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTCAGACAGAGGCCAAATGCATAGGAAGGGTTTGCTGAATGGCA  544

seq1  TAGTCAGGGACTGCTGTAGACAAGTGCATGGACAAGTGTGCTGTAGCAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGGGACTGCTGTAGACAAGTGCATGGACAAGTGTGCTGTAGCAGT  594

seq1  CCAATCACATGAAAAATCAATCGACTATACGACTAGCATGACTTTCATGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCACATGAAAAATCAATCGACTATACGACTAGCATGACTTTCATGG  644

seq1  TGGAACTAGAAAATATCATCCTGAGTGAGGTAACCCAATCACAAAAGAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTAGAAAATATCATCCTGAGTGAGGTAACCCAATCACAAAAGAAC  694

seq1  ACACATGGTGTACACTCACTGATAAGTGGATATTAGCCCAGATGCTCAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGTGTACACTCACTGATAAGTGGATATTAGCCCAGATGCTCAGA  744

seq1  ATACATAAGATACGACTCACAGACCAAATGAAGCTCAAGAAGAAGGAAGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAGATACGACTCACAGACCAAATGAAGCTCAAGAAGAAGGAAGA  794

seq1  CGAAAGTATGGATAGTTCAGTCCTTCTTAGAAGGGAGAACAAAATACCCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAGTATGGATAGTTCAGTCCTTCTTAGAAGGGAGAACAAAATACCCA  844

seq1  TGGGAGGAGATACAGAGGCAAAGTGTGGAGCAGAGACTGAAGCAAAGACC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGATACAGAGGCAAAGTGTGGAGCAGAGACTGAAGCAAAGACC  894

seq1  ATACAGAGTCTGCCCCACCTGGGGATCCATCCCATATACAATCACTAAAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAGTCTGCCCCACCTGGGGATCCATCCCATATACAATCACTAAAC  944

seq1  CCAGACACTATTGTGGATGCCAACAAATGCTTGCTGACAGGACTGATATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACACTATTGTGGATGCCAACAAATGCTTGCTGACAGGACTGATATA  994

seq1  GCTGTCACCTGAGACACCACCCATTTGCCTAAGAATTTCATGAATTC  1042
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACCTGAGACACCACCCATTTGCCTAAGAATTTCATGAATTC  1041

seq1: chr13_34974277_34975363
seq2: B6Ng01-207N22.g_67_1149

seq1  GAATTCTACATCACAATCCAAAGGCAAGCAGGAGACTCTGCAGTCAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATCACAATCCAAAGGCAAGCAGGAGACTCTGCAGTCAGCCA  50

seq1  GGAGGAGACTCTCATCTGCCCTAGGCAGAGCTAGGAGACCTCAAAGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGACTCTCATCTGCCCTAGGCAGAGCTAGGAGACCTCAAAGTCCT  100

seq1  CCTGCACAGCAACGTACTTCCTCCAACAAGGCCACACCTAACAGTGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACAGCAACGTACTTCCTCCAACAAGGCCACACCTAACAGTGGGCC  150

seq1  TCTTACTGTGGACCAGGCATATTCAAACCACCACAGTTCTCATTCCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTGTGGACCAGGCATATTCAAACCACCACAGTTCTCATTCCAGCT  200

seq1  AGTTTTTCGAAGTCTTAGACCATGGGAATTTTTTGTTTGTGTTGTTACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCGAAGTCTTAGACCATGGGAATTTTTTGTTTGTGTTGTTACTA  250

seq1  CTGTGCTCTTCTGAAGCTTCTGGGGGCACACTAACTACTTTGGATTTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCTTCTGAAGCTTCTGGGGGCACACTAACTACTTTGGATTTACC  300

seq1  CAATATTAGCTATTGAGTTTTTTTTTCAAGAAGGGGTGTTTAGGTGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTAGCTATTGAGTTTTTTTTTCAAGAAGGGGTGTTTAGGTGAGAT  350

seq1  TGTTCACAGTAAGTAAACAGGTAGATTATTGTTGACAACCAAGTTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAGTAAGTAAACAGGTAGATTATTGTTGACAACCAAGTTTTCTG  400

seq1  AGCATCAAGTGGAAAGATTAACTTCTCAGTATGTTAGTATCTATGCCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAAGTGGAAAGATTAACTTCTCAGTATGTTAGTATCTATGCCTTA  450

seq1  TGAAAAGAGAATGTGAGCCTTTTGTATTTGTGAGAAATGCTAGTTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAGAATGTGAGCCTTTTGTATTTGTGAGAAATGCTAGTTTAAAA  500

seq1  TCAAATTACTGGAGTTTCTGTGTAACTAAAATTAATTGGATTTTGTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTACTGGAGTTTCTGTGTAACTAAAATTAATTGGATTTTGTTGCT  550

seq1  GGTTTGATTTCAGTTAAATAATGTTTTTCAAAGCCATATTCCATAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATTTCAGTTAAATAATGTTTTTCAAAGCCATATTCCATAACATA  600

seq1  TTTCATGTAATACTTTTAGATTTTAATTCAGGTATTAAAACAGGTTGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGTAATACTTTTAGATTTTAATTCAGGTATTAAAACAGGTTGTTG  650

seq1  TGTCTCCACCACCTCAGCTCTGGTCATTTGCCTCCTTTAAATAAAATACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCACCACCTCAGCTCTGGTCATTTGCCTCCTTTAAATAAAATACC  700

seq1  TGAAACTTACAACATTTTAGTGGCTCGGTTGTGTTACACTGAGATTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTACAACATTTTAGTGGCTCGGTTGTGTTACACTGAGATTCATT  750

seq1  TTATCATTACTGTTGTTATAACTGAATGCTGGGTAAATACTGTGATTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTACTGTTGTTATAACTGAATGCTGGGTAAATACTGTGATTGTA  800

seq1  AAATGTGCTTTGTACA-TTTATAGGATGGATGATGCTGATAATTC-TGAA  848
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  AAATGTGCTTTGTACATTTTATAGGATGGATGATGCTGATAATTCTTGAA  850

seq1  AAGAGTGTAAATGAAGAAAATGGAGAGGTATCAGAAGACCAATCTCAAAA  898
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  AAGAGTGTAAATGAGGAAAATGGAGA-GTATCAGAAGACCAATCTCAAAA  899

seq1  TAAACACAGTCGTCACAAAAAAAAGAAGCATAAACACAGAAGTAAACATA  948
      |||||||||||||||| |||||||||||||| ||||||||||| ||||||
seq2  TAAACACAGTCGTCAC-AAAAAAAGAAGCAT-AACACAGAAGTTAACATA  947

seq1  AGAAACATAAACATTCCTCAGAAGAAGATAGGGATAAAAAACACAAACAT  998
      |||||| | ||| |||||||  || |||||||||  |||||| | ||| |
seq2  AGAAAC-TTAACCTTCCTCAATAG-AGATAGGGAATAAAAAC-CCAACCT  994

seq1  AAGCATAAGCATAAGAAGC-ACAAAC-GGAAAGAAGTTATCGAGGCTTCC  1046
      |||||||||| ||  |||| || | | | |||||||||||||| ||||||
seq2  AAGCATAAGC-TAGTAAGCAACTATCTGTAAAGAAGTTATCGATGCTTCC  1043

seq1  GACAAAGAAGGCCTGTCCCCTGCAAA-AAGAACTAAGCTTGA  1087
      |||||||| |||| |||||||||||| ||||||||| |||||
seq2  GACAAAGAGGGCC-GTCCCCTGCAAATAAGAACTAA-CTTGA  1083