BAC Information

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BAC

Clone NameB6Ng01-209N10
Chromosome13 (Build37)
Map Location 102,107,634 - 102,257,262
singlet/doubletdoublet
Overlap geneLOC100039971, LOC100039983
Upstream geneEG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5, LOC619865, LOC619917, EG619937, 4933416M06Rik
Downstream genePik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209N10.bB6Ng01-209N10.g
ACCGA028347GA028348
length644893
definitionB6Ng01-209N10.b B6Ng01-209N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,256,619 - 102,257,262)(102,107,634 - 102,108,516)
sequence
gaattcaacacatagtagggcagctggaagtggtaagaagtatattctac
acttgtagaaactagacatctaaccacggtagactcctgttccctgggca
tgaaacctccactcactttgaatgcatctggagagggctctgttgttatc
gtccttttctaaacatggatcctgagtcagaaaagcaaagacaaaccttt
ccagaattggaattttaccaggcttttttttttttttttttagtcaaaca
gattcaagtaaatactgaatttgcatcttataaatgcatacaaacttggg
attgaaaatgcagagaaattaggtcagtaactggcaaggagcaggagttg
ttccttgagccacctccattagacttataggaatggaaaactccaatctt
gcagcccctaactttctgaactcttagtagtggaaagagtgaaaactgca
atgattttagcactttctcatccagggcaaaggtgaatgcattcttgagg
aagacttgagtaacccccagtgtctggtctagactgaaacgatgaatacc
ctgccatataacatgaagtgggaataagttaatggtttgtattttgatga
atagatagatagatagatagatagatagatagatagatagagat
gaattctttgttcagttctgagccccattttttaatggggttatttgatg
ttttctttatatacatttcaaatgctatcctgaaagttccctataccctc
cccctgccctgatcccctacccacccactcccacttcttggccctggtgt
tcccctgtactggggcatataaagtttgcaataccaaggggcctcttttc
ccagtgatggccgactaggccgtcttctgctacatatgcagctagagaca
ggagccctgggggtactggttcatattgttgttccacctatctgcagacc
ccttcaactccttgggtgctttctctagcttctccattgggggccctgtg
attcatccaatagatgacaactccactttttgtctcctgcctttagggat
gattgccccatgataggcgggaaccttggaggctaaaaaaggagaactgt
agaaaggccagtcagttctagatcctggtccacagattaagaacaattca
ttaaccactgataagtacaaaacctagttactggtgatgtgtgaaatgaa
attattgcagattgaatgcccttgtagccaatgagctaggagaaggaaaa
ttgatctgagcacacagtctttacctggtccagctggtttactgcgtttg
ttgtctctgatggcagggatgtggcaacctgtgcaatggccttcgacagg
ctccaggaaggctctgggctgtgctccttttggctctttagccaagccaa
cttggagggtctggagctttattgggaaccagggagtttctgagggttat
gaagcttttgcaaggctccataattggagcttttccctttgatgcgccct
ccatacttttttatacagtcctgatgttttaagttgggcctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102256619_102257262
seq2: B6Ng01-209N10.b_49_692 (reverse)

seq1  ATCTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATTCATCA  50

seq1  AAATACAAACCATTAACTTATTCCCACTTCATGTTATATGGCAGGGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAACCATTAACTTATTCCCACTTCATGTTATATGGCAGGGTATT  100

seq1  CATCGTTTCAGTCTAGACCAGACACTGGGGGTTACTCAAGTCTTCCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTTTCAGTCTAGACCAGACACTGGGGGTTACTCAAGTCTTCCTCAA  150

seq1  GAATGCATTCACCTTTGCCCTGGATGAGAAAGTGCTAAAATCATTGCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCATTCACCTTTGCCCTGGATGAGAAAGTGCTAAAATCATTGCAGT  200

seq1  TTTCACTCTTTCCACTACTAAGAGTTCAGAAAGTTAGGGGCTGCAAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCTTTCCACTACTAAGAGTTCAGAAAGTTAGGGGCTGCAAGATT  250

seq1  GGAGTTTTCCATTCCTATAAGTCTAATGGAGGTGGCTCAAGGAACAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTTCCATTCCTATAAGTCTAATGGAGGTGGCTCAAGGAACAACTC  300

seq1  CTGCTCCTTGCCAGTTACTGACCTAATTTCTCTGCATTTTCAATCCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTTGCCAGTTACTGACCTAATTTCTCTGCATTTTCAATCCCAAG  350

seq1  TTTGTATGCATTTATAAGATGCAAATTCAGTATTTACTTGAATCTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGCATTTATAAGATGCAAATTCAGTATTTACTTGAATCTGTTTG  400

seq1  ACTAAAAAAAAAAAAAAAAAAGCCTGGTAAAATTCCAATTCTGGAAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAAAAAAAAAAAAAAGCCTGGTAAAATTCCAATTCTGGAAAGGT  450

seq1  TTGTCTTTGCTTTTCTGACTCAGGATCCATGTTTAGAAAAGGACGATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTGCTTTTCTGACTCAGGATCCATGTTTAGAAAAGGACGATAAC  500

seq1  AACAGAGCCCTCTCCAGATGCATTCAAAGTGAGTGGAGGTTTCATGCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGCCCTCTCCAGATGCATTCAAAGTGAGTGGAGGTTTCATGCCCA  550

seq1  GGGAACAGGAGTCTACCGTGGTTAGATGTCTAGTTTCTACAAGTGTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGGAGTCTACCGTGGTTAGATGTCTAGTTTCTACAAGTGTAGAA  600

seq1  TATACTTCTTACCACTTCCAGCTGCCCTACTATGTGTTGAATTC  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCTTACCACTTCCAGCTGCCCTACTATGTGTTGAATTC  644

seq1: chr13_102107634_102108516
seq2: B6Ng01-209N10.g_70_962

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATG  50

seq1  TTTTCTTTATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTATATACATTTCAAATGCTATCCTGAAAGTTCCCTATACCCTC  100

seq1  CCCCTGCCCTGATCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCCTGATCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGT  150

seq1  TCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTACTGGGGCATATAAAGTTTGCAATACCAAGGGGCCTCTTTTC  200

seq1  CCAGTGATGGCCGACTAGGCCGTCTTCTGCTACATATGCAGCTAGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGATGGCCGACTAGGCCGTCTTCTGCTACATATGCAGCTAGAGACA  250

seq1  GGAGCCCTGGGGGTACTGGTTCATATTGTTGTTCCACCTATCTGCAGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCCTGGGGGTACTGGTTCATATTGTTGTTCCACCTATCTGCAGACC  300

seq1  CCTTCAACTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGGGCCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGGGCCCTGTG  350

seq1  ATTCATCCAATAGATGACAACTCCACTTTTTGTCTCCTGCCTTTAGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCCAATAGATGACAACTCCACTTTTTGTCTCCTGCCTTTAGGGAT  400

seq1  GATTGCCCCATGATAGGCGGGAACCTTGGAGGCTAAAAAAGGAGAACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGCCCCATGATAGGCGGGAACCTTGGAGGCTAAAAAAGGAGAACTGT  450

seq1  AGAAAGGCCAGTCAGTTCTAGATCCTGGTCCACAGATTAAGAACAATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCCAGTCAGTTCTAGATCCTGGTCCACAGATTAAGAACAATTCA  500

seq1  TTAACCACTGATAAGTACAAAACCTAGTTACTGGTGATGTGTGAAATGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCACTGATAAGTACAAAACCTAGTTACTGGTGATGTGTGAAATGAA  550

seq1  ATTATTGCAGATTGAATGCCCTTGTAGCCAATGAGCTAGGAGAAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGCAGATTGAATGCCCTTGTAGCCAATGAGCTAGGAGAAGGAAAA  600

seq1  TTGATCTGAGCACACAGTCTTTACCTGGTCCAGCTGGTTTACTGCGTTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGAGCACACAGTCTTTACCTGGTCCAGCTGGTTTACTGCGTTTG  650

seq1  TTGTCTCTGATGGCAGGGATGTGGCAACCTGTGCAATGGCCTTCGACAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCTGATGGCAGGGATGTGGCAACCTGTGCAATGGCCTTCGACAGG  700

seq1  CTCCAGGAAGGCTCTGGGCTGTGCTCCTTTTGGCTCTTTAGCCAAGCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGAAGGCTCTGGGCTGTGCTCCTTTTGGCTCTTTAGCCAAGCCAA  750

seq1  CTTGGAGGGTCTGGAGCTTTATTGGGAACCAGGGAGTTTCTGAGGGTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGGTCTGGAGCTTTATTGGGAACCAGGGAGTTTCTGAGGGTTAT  800

seq1  GAAGCTTTTGCAAGGCT-CATAA-TGGAGCTTT--CCCTTGATGCG-CCT  845
      ||||||||||||||||| ||||| |||||||||  || |||||||| |||
seq2  GAAGCTTTTGCAAGGCTCCATAATTGGAGCTTTTCCCTTTGATGCGCCCT  850

seq1  CCATAC--TTTTATACAGT-CTGATGTTTT-AGTT-GGCCTGG  883
      ||||||  ||||||||||| |||||||||| |||| |||||||
seq2  CCATACTTTTTTATACAGTCCTGATGTTTTAAGTTGGGCCTGG  893