BAC Information

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BAC

Clone NameB6Ng01-211O05
Chromosome13 (Build37)
Map Location 114,519,296 - 114,687,305
singlet/doubletdoublet
Overlap geneEG632832, LOC622701, LOC100040927, Arl15
Upstream gene9130023D20Rik, Ppap2a, LOC100041282, Skiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3
Downstream geneA430090L17Rik, Ndufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211O05.bB6Ng01-211O05.g
ACCGA029828GA029829
length3331,076
definitionB6Ng01-211O05.b B6Ng01-211O05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,686,973 - 114,687,305)(114,519,296 - 114,520,371)
sequence
accgaagcaagcagcatggacgtgtctgggtgttctccaggtaatgagaa
acatctccccgaaggcaggccaagggaagtgcgttcaatgactgttcttt
taacacgcctttcgggtacatgtcttaaggctggtgtcacaaagaagcag
gaggggctgcttgcccctgcttcatgatcacactagctccgaacataatt
aaaactaatccttttacctgcctacacttcttacaagcaatctgtctagt
gcatacattaaaaaggtctggatgctttgcaccaacaagattcaatcagt
accttaacattttagggggggagaggggggagg
gaattcattaaataactgaggttgagacactcagtggccaaattcaaaca
tggaggaaatgagattcatggggtctaagtaacttttcattatgttttaa
acttgccctatcctgtattccagccattccccacatggtggctgtttaga
tttaaatacattcaaggtaaataaaatttaacttatacatagtttgcaac
tattcaatatctacatgcagctagtggctaccacattaatcagagaagat
acagagatatctgtcaagacagtcagttcttttagctatcgttgtgagag
gtaattccatatgtgttcataaacacatttctataaagcatggccaagaa
ttgccttatgccttgctatagatttctatgaaaacattaatcaacttcat
acacattaaaagccattatttcacaatggttaccatggcaaaaatatttt
taaagcaagaatatctcaacagtagatgaagcacctaataccacaataaa
gatggtagctccctaggccagcatggacatcactcaaatccacaccacct
ctacacctaaactcatggataataatccaaaagaacaacctgtttccttg
actggcaagcagagcatactggaagagatgcaaaagccacaattcccact
gagtggcccatcaggcccaaagccagtgcacaaacctgtccaggcacagc
cctgacctcaagagtgcaaacaggaaaccagtagaggatgatacatcctc
tttataaaccaaaaaacaaggcccagtcggaagaaccaagaatgagaatt
attctcattcttagattattaggatttgtcatccccattgtcatgtttta
aaatattgaacagatttttacccttgaaaacatcttgggcctcttagggt
aaacatgcacaggacaaacagaatcgataaagcaggtgttggttgctgga
aggattttttgcagaagttagcagtaattttgtcaggcaactgtcgtttc
ctttcttttttttttaaatcaacatttgctggctttgttttacagtgtgt
atgaattgaaattgtaataccgctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_114686973_114687305
seq2: B6Ng01-211O05.b_55_387 (reverse)

seq1  CCTCCCCCCTCTCCCCCCCTAAAATGTTAAGGTACTGATTGAATCTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCCTCTCCCCCCCTAAAATGTTAAGGTACTGATTGAATCTTGTT  50

seq1  GGTGCAAAGCATCCAGACCTTTTTAATGTATGCACTAGACAGATTGCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAAAGCATCCAGACCTTTTTAATGTATGCACTAGACAGATTGCTTG  100

seq1  TAAGAAGTGTAGGCAGGTAAAAGGATTAGTTTTAATTATGTTCGGAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGTGTAGGCAGGTAAAAGGATTAGTTTTAATTATGTTCGGAGCTA  150

seq1  GTGTGATCATGAAGCAGGGGCAAGCAGCCCCTCCTGCTTCTTTGTGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATCATGAAGCAGGGGCAAGCAGCCCCTCCTGCTTCTTTGTGACAC  200

seq1  CAGCCTTAAGACATGTACCCGAAAGGCGTGTTAAAAGAACAGTCATTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTAAGACATGTACCCGAAAGGCGTGTTAAAAGAACAGTCATTGAA  250

seq1  CGCACTTCCCTTGGCCTGCCTTCGGGGAGATGTTTCTCATTACCTGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTTCCCTTGGCCTGCCTTCGGGGAGATGTTTCTCATTACCTGGAGA  300

seq1  ACACCCAGACACGTCCATGCTGCTTGCTTCGGT  333
      |||||||||||||||||||||||||||||||||
seq2  ACACCCAGACACGTCCATGCTGCTTGCTTCGGT  333

seq1: chr13_114519296_114520371
seq2: B6Ng01-211O05.g_73_1148

seq1  GAATTCATTAAATAACTGAGGTTGAGACACTCAGTGGCCAAATTCAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAATAACTGAGGTTGAGACACTCAGTGGCCAAATTCAAACA  50

seq1  TGGAGGAAATGAGATTCATGGGGTCTAAGTAACTTTTCATTATGTTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAATGAGATTCATGGGGTCTAAGTAACTTTTCATTATGTTTTAA  100

seq1  ACTTGCCCTATCCTGTATTCCAGCCATTCCCCACATGGTGGCTGTTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCCCTATCCTGTATTCCAGCCATTCCCCACATGGTGGCTGTTTAGA  150

seq1  TTTAAATACATTCAAGGTAAATAAAATTTAACTTATACATAGTTTGCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACATTCAAGGTAAATAAAATTTAACTTATACATAGTTTGCAAC  200

seq1  TATTCAATATCTACATGCAGCTAGTGGCTACCACATTAATCAGAGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAATATCTACATGCAGCTAGTGGCTACCACATTAATCAGAGAAGAT  250

seq1  ACAGAGATATCTGTCAAGACAGTCAGTTCTTTTAGCTATCGTTGTGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATATCTGTCAAGACAGTCAGTTCTTTTAGCTATCGTTGTGAGAG  300

seq1  GTAATTCCATATGTGTTCATAAACACATTTCTATAAAGCATGGCCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCCATATGTGTTCATAAACACATTTCTATAAAGCATGGCCAAGAA  350

seq1  TTGCCTTATGCCTTGCTATAGATTTCTATGAAAACATTAATCAACTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTATGCCTTGCTATAGATTTCTATGAAAACATTAATCAACTTCAT  400

seq1  ACACATTAAAAGCCATTATTTCACAATGGTTACCATGGCAAAAATATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAAAAGCCATTATTTCACAATGGTTACCATGGCAAAAATATTTT  450

seq1  TAAAGCAAGAATATCTCAACAGTAGATGAAGCACCTAATACCACAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAAGAATATCTCAACAGTAGATGAAGCACCTAATACCACAATAAA  500

seq1  GATGGTAGCTCCCTAGGCCAGCATGGACATCACTCAAATCCACACCACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTAGCTCCCTAGGCCAGCATGGACATCACTCAAATCCACACCACCT  550

seq1  CTACACCTAAACTCATGGATAATAATCCAAAAGAACAACCTGTTTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACCTAAACTCATGGATAATAATCCAAAAGAACAACCTGTTTCCTTG  600

seq1  ACTGGCAAGCAGAGCATACTGGAAGAGATGCAAAAGCCACAATTCCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAAGCAGAGCATACTGGAAGAGATGCAAAAGCCACAATTCCCACT  650

seq1  GAGTGGCCCATCAGGCCCAAAGCCAGTGCACAAACCTGTCCAGGCACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCCCATCAGGCCCAAAGCCAGTGCACAAACCTGTCCAGGCACAGC  700

seq1  CCTGACCTCAAGAGTGCAAACAGGAAACCAGTAGAGGATGATACATCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTCAAGAGTGCAAACAGGAAACCAGTAGAGGATGATACATCCTC  750

seq1  TTTATAAACCAAAAAACAAGGCCCAGTCGGAAGAACCAAGAATGAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAACCAAAAAACAAGGCCCAGTCGGAAGAACCAAGAATGAGAATT  800

seq1  ATTCTCATTCTTAGAATATTAGGATTTGTCATCCCCATTGTCATGTTTTA  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTCTCATTCTTAGATTATTAGGATTTGTCATCCCCATTGTCATGTTTTA  850

seq1  AAATTATTGAACAGATTTTTACCCCTGAAAACATCTT-GGCCTCTTAGGG  899
      ||| |||||||||||||||||||| |||||||||||| ||||||||||||
seq2  AAA-TATTGAACAGATTTTTACCCTTGAAAACATCTTGGGCCTCTTAGGG  899

seq1  TAAACATGCACAGGAC-AACAGAATCGATAAAGCAGGTGTTGG-TGCTGG  947
      |||||||||||||||| |||||||||||||||||||||||||| ||||||
seq2  TAAACATGCACAGGACAAACAGAATCGATAAAGCAGGTGTTGGTTGCTGG  949

seq1  AAGGA-TTTTTGCAG-AGTTAGCAGTATTTTTGTCAGTGCAACTGTCTTT  995
      ||||| ||||||||| ||||||||||| ||||||||| ||||||||| ||
seq2  AAGGATTTTTTGCAGAAGTTAGCAGTAATTTTGTCAG-GCAACTGTCGTT  998

seq1  TTCTTTCTTTTTTTTTTAAATCAACATTTGCTGGCTTTGTTTTTACAGTT  1045
      | ||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  TCCTTTCTTTTTTTTTTAAATCAACATTTGCTGGCTTTG-TTTTACAG-T  1046

seq1  GTGTTATGAAATTGAAA-TGTAATACCGCTGT  1076
      ||| |||| |||||||| ||||||||||||||
seq2  GTG-TATG-AATTGAAATTGTAATACCGCTGT  1076