BAC Information

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BAC

Clone NameB6Ng01-212K16
Chromosome13 (Build37)
Map Location 50,324,439 - 50,325,007
singlet/doubletsinglet
Overlap genenone
Upstream geneSusd3, Fgd3, Bicd2, Ippk, Cenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176
Downstream geneLOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212K16.bB6Ng01-212K16.g
ACCGA030406GA030407
length308563
definitionB6Ng01-212K16.b B6Ng01-212K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acctagaggtgtaacagtgggttgggatgagggaattctgcataggcatt
agtctgcagccaagaactgcatcaggtgagtccacagccaagagtttcat
caggggagaagggggaggggaaggagggagggatgttggtggtctttttg
tcttattgacagtgtcttttgccttgcagaaactttggagtttcattagg
tcccatttgtcaattctcgatcttacagcacaagccattgcttttctgtt
caggaatttttctcctgtgcccatatcttcttggcttttccccattttct
cctcttta
atatttctctcaacaattaactaaagaggagtaaaggaagaaccaggttc
ctagtaatccccacttctcaacatagacacatttgacacctattctctgc
tatgaacgaaggcaggctgacactgatggtctggagatcccacactcaga
gccccaggctatgagtcaggcctgttagagactctttcctcagagtccac
agaccaggaggtgcctgggaaggaattttatctaagtatctttctgggta
cctaaaaaccagggcaaggcttttgaaaacagactttgattaccttgtgt
gatcccaggtttatatgtagatataagaaaatcctgaggacatagtgaca
ggtcctgctgcactggttagtacatacacattaagtgtattgtgttccct
ggcctgagggtcagacagaaagttatgccagcctgaagggagttccagat
gcctcccacataggaacaaaatgtttattgctcctgactgagaagtgcca
ttgcatcttggaatcttgaattatgcagtgtgcgtgtgtgaatgtgcatg
tggttttgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50324439_50325007
seq2: B6Ng01-212K16.g_66_634

seq1  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAAAGGAAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTCTCTCAACAATTAACTAAAGAGGAGTAAAGGAAGAACC  50

seq1  AGGTTCCTAGTAATCCCCACTTCTCAACATAGACACATTTGACACCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCTAGTAATCCCCACTTCTCAACATAGACACATTTGACACCTATT  100

seq1  CTCTGCTATGAACGAAGGCAGGCTGACACTGATGGTCTGGAGATCCCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTATGAACGAAGGCAGGCTGACACTGATGGTCTGGAGATCCCACA  150

seq1  CTCAGAGCCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGCCCCAGGCTATGAGTCAGGCCTGTTAGAGACTCTTTCCTCAGA  200

seq1  GTCCACAGACCAGGAGGTGCCTGGGAAGGAATTTTATCTAAGTATCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACAGACCAGGAGGTGCCTGGGAAGGAATTTTATCTAAGTATCTTTC  250

seq1  TGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACCTAAAAACCAGGGCAAGGCTTTTGAAAACAGACTTTGATTACC  300

seq1  TTGTGTGATCCCAGGTTTATATGTAGATATAAGAAAATCCTGAGGACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGATCCCAGGTTTATATGTAGATATAAGAAAATCCTGAGGACATA  350

seq1  GTGACAGGTCCTGCTGCACTGGTTAGTACATACACATTAAGTGTATTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGGTCCTGCTGCACTGGTTAGTACATACACATTAAGTGTATTGTG  400

seq1  TTCCCTGGCCTGAGGGTCAGACAGAAAGTTATGCCAGCCTGAAGGGAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGCCTGAGGGTCAGACAGAAAGTTATGCCAGCCTGAAGGGAGTT  450

seq1  CCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGCCTCCCACATAGGAACAAAATGTTTATTGCTCCTGACTGAGAA  500

seq1  GTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCATTGCATCTTGGAATCTTGAATTATGCAGTGTGCGTGTGTGAATG  550

seq1  TGCATGTGGTTTTGTGTGT  569
      |||||||||||||||||||
seq2  TGCATGTGGTTTTGTGTGT  569