BAC Information

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BAC

Clone NameB6Ng01-217G02
Chromosome13 (Build37)
Map Location 29,331,176 - 29,331,687
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042388, LOC100042393, LOC100042399, Ppia-ps13_297.1, LOC626683, 2610307P16Rik, Sox4, LOC100041135
Downstream geneCdkal1, E2f3, Mboat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217G02.bB6Ng01-217G02.g
ACCGA033806GA033807
length1,018963
definitionB6Ng01-217G02.b B6Ng01-217G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatgaattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgtt
ttaatgtgttcttggatttggttagcgagaattttattgaggatttttgc
atcgatattcataagggaaatttttctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagttccttctacttctattttgtggaatagtttgtgaagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaacctatctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttct
ttaggggatatgggactgtttagatcgttaacttgatcctgatttaactt
tggtacctggtatctgtctagaaatttgtccactttttccaggttttcca
gttatagccttttgagtatagccttttgtagaaggatctgatggtgtttt
ggatttcttcaggatctgttgttatgtctcccttttcatttctgattttg
ttaattaggatgttgtccctgtgccctctagtgagtctagctaagggttt
atctctctcgttgattttctcaaagaaccaactcctcgtttggttaattc
ttgaatagttcttcttgtttccacttggttgatttcacccctgaagtttg
attatttcctgcagtaatacttcctcttgggtgaattttctttttttttt
ttcctagagctttttagatgtgtttgtcaagctgcttagtgtgtgctctc
tccagatttctttttggaggcactcagaagctatgagttctcctcttaga
aatgctctcattgtgtcc

gaattctcattgtgtcctggatttcctggattttttgagttaggatgttt
ttacattttgcattttctttgatttttgtatccatgttccctagggaatc
ttctgcccctgagattctctcttccatctcttttattctgttgctgatga
tcacatctatggttcctgatttctttcctaaggtttctatatccagagtc
cttactttgggttttctttattttttctatttccatttttagatcttgga
ttgttctgttcaattccatcccctgttatctgtgttttcctgtaattctt
taaagggttttttgtttgtttgtttgtttgtttgtttagcatgtttagca
atgtttgcctgtagttctttaaggacttctacctgtttagcagtgttctc
ctgtaattctttgaggaatttttgtgctttctctttaagggcttctacct
gcttagtagtgttctcctgtatttctttaaatgagtttttagtaccgttc
ttaaaatcttctaccaccatcatgagatatgattttaaatctgagtcttg
cttttagggtgtgttggggtatccaggactcactgtagtgggtgaactgg
gttctgatgatgcccagtattcttggtttctgttagtaagattcttactt
ttgctttttgccatctggtaatctctggtgttaatgtcctagctgtctct
ggctgaagcttgatcctcctgtgactctcttagcctctgtcatcactcct
gggagtccaactctcacctgagttccaggggtcagagcactctctgcagg
caagctctcctcttgcaggccagatgtccagaaagtctggagctctggtc
tacctcctgaatcctggggtcagagccctccctgtaggcctactctcttc
tggcaaggaaagtgcccaaggttttggatctcagctctccctcctgccta
aggaagaagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_29331176_29331687
seq2: B6Ng01-217G02.b_540_1065 (reverse)

seq1  GGACACAATGAAAGCATTTCTAAGAGGGAAACTCATAGC-TCTGAGTGCC  49
      ||||||||||| |||||||||||||||  |||||||||| ||||||||||
seq2  GGACACAATGAGAGCATTTCTAAGAGGAGAACTCATAGCTTCTGAGTGCC  50

seq1  TCCAAGAAGAAA-CGGGAGAGAGCACATACT-AGCAGCTTGAC-AACACA  96
      ||||| |||||| | |||||||||||| ||| ||||||||||| ||||||
seq2  TCCAAAAAGAAATCTGGAGAGAGCACACACTAAGCAGCTTGACAAACACA  100

seq1  TCT-AAAAGCTCTAG--AAAAAAAGGAAGCAAATTCACCCAAGAGG-AGT  142
      ||| |||||||||||  |||||||  ||| |||||||||||||||| |||
seq2  TCTAAAAAGCTCTAGGAAAAAAAAAAAAGAAAATTCACCCAAGAGGAAGT  150

seq1  A-GACGGCAGGAAATAATCAAAC-TCAGGGGTGAAATCAACCAAGTGGAA  190
      |  || ||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATTACTGCAGGAAATAATCAAACTTCAGGGGTGAAATCAACCAAGTGGAA  200

seq1  ACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGA  240
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACAAGAAGAACTATTC-AAGAATTAACCAAACGAGGAGTTGGTTCTTTGA  249

seq1  GAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACA  290
      |||||||||| ||| |||||||||||||||||||||||||| ||||||||
seq2  GAAAATCAACGAGAGAGATAAACCCTTAGCTAGACTCACTAGAGGGCACA  299

seq1  GGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACATAACA  340
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  GGGACAACATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACA  349

seq1  ACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGCT  399

seq1  ATACTCAA-----CAAAACTGGAAAACCTGGACGAAATGGACAAATTTCT  435
      ||||||||      | ||||||||||||||||  || |||||||||||||
seq2  ATACTCAAAAGGCTATAACTGGAAAACCTGGAAAAAGTGGACAAATTTCT  449

seq1  GGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATCTAA  485
       ||||||||||||||||||||||| ||||||||||||||| || ||||||
seq2  AGACAGATACCAGGTACCAAAGTTAAATCAGGATCAAGTTAACGATCTAA  499

seq1  ACAGTCCCATATCACCTAAAGAAATAG  512
      ||||||||||||| |||||||||||||
seq2  ACAGTCCCATATCCCCTAAAGAAATAG  526


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