BAC Information

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BAC

Clone NameB6Ng01-222E15
Chromosome13 (Build37)
Map Location 33,247,298 - 33,248,140
singlet/doubletsinglet
Overlap geneSerpinb9c
Upstream geneGmds, Wrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301
Downstream geneSerpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724, Serpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222E15.bB6Ng01-222E15.g
ACCGA037348GA037349
length8441,191
definitionB6Ng01-222E15.b B6Ng01-222E15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaatttggagtgctgtccatcacttgaagagatgatggaggt
aagaagacagattcctttctaatgtattaagagatatccttccaataatc
aatcgtttattgtatgctaacatacaatatcaaagttcacaagagataaa
gactctaacaagaaatgggcaaagaattgctgagtctttaagaaaagatt
ctcattctttactccctgttagcagaaataggaaagtacctagtgataca
gagagatcagaatgtttcagatatcagataatgctttcaatgctctcatc
taccaagacctgttcaaccccaaatttgatgttctcttaggccaatatga
ctgaggctttgataaattgtgttcaattgaaatcaagtccagtttcatca
aatataagtacgggaactaaactagaaaatttggaagcagaaacatgact
cctttgcaaaggtaaatatggtgagacctgagacaatgtagactgtagga
aaaagaagcctctaggcaggattagaaagttctatccacaaatctacttt
tcagagatggcagaggcacaggacctgtgaatactggagaccagccatat
cttctaatgtaaactgttagactggaaatctggcccatgagttctcacca
tatttgcatcagaccctctgctgtcctaaagaaatacagaaacaactgcg
tatttataatctagttgtctgagtagaacctccatgaattcactgagctc
taaattataccatgtggcctatataggctgaattaccttgactcagaaat
aatggtgagattagtctatggtgtgtgtgtggagggggaggggg
gaattccaagtagtcagctacaccgtctttttagggtgttggaaccctgt
cgaagattgagtgtacaaatttgaaaggcactttattatgaataacactg
aagaagagtatgtggatgttcctcagcattcttggatgacaggcagggaa
tagggaggagggggtgacaactggcaccgtagtacaaggccaattggctt
tttagggtgggaggctgtgaagggcttgcacttctaaaggtatggtctcc
aacctctccccccccctattaattaaggttaaataaggccatgcttaact
gaggtgatcaaatgtttttctcatcagtagatgaattagtaaaaaggcca
gagactctctggaagtgggggatgtgctctgaattaactttgttaggtaa
ttaagaatatagttatctacaatagggatctctaatattggactaaacat
tagaagagtctaagattgagttagaatgactggtcacactgaagaaaaga
gaaaaatcattatgactctattaaatgactaatcttactaagtcagaaca
tacagtctctgatatactattgccaaaaagttaaaaggcttgaagctagt
tcaaactggaaaaatggtaagcaaggatggatgtaaaacatgaacccaat
ttagttttctagtcactttaatcagggcactgagtcaacttacctgccag
ctcgtcacacaaattaaccatcatgcttttgcagcattctgtggagagaa
cctgtttttccctttccctaagaaggcagctgtttaggatcaatctataa
gccaataagtagatccttttaagatactataaagcatttagtaaattctt
tgacatttaaattttaaaatttgaaaattaaggtatgatttaaatagtgt
gcatgggaatgcactaaatagtatgtacggggatacaatttctcccttct
ttgtcttttaagaagtttaaaattttaaagttcacaattatctaatcctt
tgaattataacttgtgacaaaacaatttaatacttggctgtaaggatcag
tgactaatgcactttcattcatttctctttaagaagtggttgttaactta
gaagctgacagtaatcggagttcacatggctaataatagtatactagaat
aaggaaacatttaatttgctggcctaattaggataatagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33247298_33248140
seq2: B6Ng01-222E15.b_47_890

seq1  GAATTCCACAATTTGGAGTGCTGTCCATCACTTGAAGAGATGATGGAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAATTTGGAGTGCTGTCCATCACTTGAAGAGATGATGGAGGT  50

seq1  AAGAAGACAGATTCCTTTCTAATGTATTAAGAGATATCCTTCCAATAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACAGATTCCTTTCTAATGTATTAAGAGATATCCTTCCAATAATC  100

seq1  AATCGTTTATTGTATGCTAACATACAATATCAAAGTTCACAAGAGATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGTTTATTGTATGCTAACATACAATATCAAAGTTCACAAGAGATAAA  150

seq1  GACTCTAACAAGAAATGGGCAAAGAATTGCTGAGTCTTTAAGAAAAGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTAACAAGAAATGGGCAAAGAATTGCTGAGTCTTTAAGAAAAGATT  200

seq1  CTCATTCTTTACTCCCTGTTAGCAGAAATAGGAAAGTACCTAGTGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTTTACTCCCTGTTAGCAGAAATAGGAAAGTACCTAGTGATACA  250

seq1  GAGAGATCAGAATGTTTCAGATATCAGATAATGCTTTCAATGCTCTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATCAGAATGTTTCAGATATCAGATAATGCTTTCAATGCTCTCATC  300

seq1  TACCAAGACCTGTTCAACCCCAAATTTGATGTTCTCTTAGGCCAATATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGACCTGTTCAACCCCAAATTTGATGTTCTCTTAGGCCAATATGA  350

seq1  CTGAGGCTTTGATAAATTGTGTTCAATTGAAATCAAGTCCAGTTTCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCTTTGATAAATTGTGTTCAATTGAAATCAAGTCCAGTTTCATCA  400

seq1  AATATAAGTACGGGAACTAAACTAGAAAATTTGGAAGCAGAAACATGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGTACGGGAACTAAACTAGAAAATTTGGAAGCAGAAACATGACT  450

seq1  CCTTTGCAAAGGTAAATATGGTGAGACCTGAGACAATGTAGACTGTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAAAGGTAAATATGGTGAGACCTGAGACAATGTAGACTGTAGGA  500

seq1  AAAAGAAGCCTCTAGGCAGGATTAGAAAGTTCTATCCACAAATCTACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAGCCTCTAGGCAGGATTAGAAAGTTCTATCCACAAATCTACTTT  550

seq1  TCAGAGATGGCAGAGGCACAGGACCTGTGAATACTGGAGACCAGCCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATGGCAGAGGCACAGGACCTGTGAATACTGGAGACCAGCCATAT  600

seq1  CTTCTAATGTAAACTGTTAGACTGGAAATCTGGCCCATGAGTTCTCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAATGTAAACTGTTAGACTGGAAATCTGGCCCATGAGTTCTCACCA  650

seq1  TATTTGCATCAGACCCTCTGCTGTCCTAAAGAAATACAGAAACAACTGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATCAGACCCTCTGCTGTCCTAAAGAAATACAGAAACAACTGCG  700

seq1  TATTTATAATCTAGTTGTCTGAGTAGAACCTCCATGAATTCACTGAGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATAATCTAGTTGTCTGAGTAGAACCTCCATGAATTCACTGAGCTC  750

seq1  TAAATTATACCATGTGGCCTATATAGGCTGAATTACCTTGACTCAGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATACCATGTGGCCTATATAGGCTGAATTACCTTGACTCAGAAAT  800

seq1  AATGGTGAGATTAGTCTATGGTGTGTGTGTGGA-GGGGAGGGGG  843
      ||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATGGTGAGATTAGTCTATGGTGTGTGTGTGGAGGGGGAGGGGG  844