BAC Information

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BAC

Clone NameB6Ng01-230M07
Chromosome13 (Build37)
Map Location 89,444,194 - 89,445,292
singlet/doubletsinglet
Overlap geneEdil3
Upstream geneLOC667230, EG435375
Downstream geneHapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230M07.bB6Ng01-230M07.g
ACCGA043548GA043549
length5001,091
definitionB6Ng01-230M07.b B6Ng01-230M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttattagatt
ttctgaagtccatcttcttgtgttctttatatatattggatattagtccc
ctatctgatttgggataagtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaagcttttgccatatc
cagggatccatcccataatcagcttccaaacgctgacaccattgcataca
ctagtaagattttgctgaaaggaccctgatatagctgtctcttgtgagac
tatgccgggacctcgcaaacacagaagtggatgctcacagtcagctattg
gatgggtcacacggcccccagtggaggagctagagaaaatacccaaggag
ctaaagggaactgcaaccctataggtggaacaacaatatgaactaaccag
taccccggagctcttgtctctagctgcatatgtatcaaaagatggcctag


gaattctttgtattctatctatgctctctaaaagtaaagactggtggtat
aaactagacaactacttataacagatcaaaaatttaattttcttcttagt
agttagactttttgaacttctttgattaaaaatgaaccaacaacattatt
gaaaataaaaacaaataaataaaaaagaatagattaagagtgctaacaaa
ccactatcatagacacatagactgtatacaaaatctatgagatgatattt
tattgaagtgagcataatattgtgtttcaatttaacttttaaataaattt
acagaaaaaaatacgacacagaagaataaagacacacttgtcctgctttg
ttgttaattattttgtcacccaaacccagaacttttctttttcagtattt
gatatactatcctcacttgggtccttcagcttgttgaacttttagagttc
tgtgggctgtatcttgggttttcagcactttttttttttttttttggctg
accatgtgttttgtcttgctaacagatgtttccatgagattttttaaaaa
tgcatatgaaaaaccctagcagtcttaacaaagaaacatggttatgaata
aacataataaatatttgatttttacaaacattaatgtattaatttccaaa
tcctcaaatgtccagaaaatttattttttattttatatatttttgtaatt
gtttcttttattgaaaatacttttttcttttgtttaattaatattttatt
tgtttacatcccaaattttgctcccctcctggtccccccaactgagctct
tacacccatacccctccccttaacttctgacagtggggggacactttttt
catataagataatctgatcaggatttcccctccccaatatgcttgtccac
acctctccacctactcaatccatatcttctttctcttttatttaggaaaa
gagaaaacaaacatttatatttttacttcctcatcattcatggtaatcaa
taaacatgccatatggcagatggcaagcatctctctccatttggcttatg
caatatattagacacatacatgggcaaatatgacaatattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_89444194_89445292
seq2: B6Ng01-230M07.g_69_1159

seq1  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTATTCTATCTATGCTCTCTAAAAGTAAAGACTGGTGGTAT  50

seq1  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGACAACTACTTATAACAGATCAAAAATTTAATTTTCTTCTTAGT  100

seq1  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACTTTTTGAACTTCTTTGATTAAAAATGAACCAACAACATTATT  150

seq1  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAAAAACAAATAAATAAAAAAGAATAGATTAAGAGTGCTAACAAA  200

seq1  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCATAGACACATAGACTGTATACAAAATCTATGAGATGATATTT  250

seq1  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAGTGAGCATAATATTGTGTTTCAATTTAACTTTTAAATAAATTT  300

seq1  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAATACGACACAGAAGAATAAAGACACACTTGTCCTGCTTTG  350

seq1  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATTATTTTGTCACCCAAACCCAGAACTTTTCTTTTTCAGTATTT  400

seq1  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTATCCTCACTTGGGTCCTTCAGCTTGTTGAACTTTTAGAGTTC  450

seq1  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGCTGTATCTTGGGTTTTCAGCACTTTTTTTTTTTTTTTTTGGCTG  500

seq1  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGTTTTGTCTTGCTAACAGATGTTTCCATGAGATTTTTTAAAAA  550

seq1  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGAAAAACCCTAGCAGTCTTAACAAAGAAACATGGTTATGAATA  600

seq1  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAATATTTGATTTTTACAAACATTAATGTATTAATTTCCAAA  650

seq1  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAATGTCCAGAAAATTTATTTTTTATTTTATATATTTTTGTAATT  700

seq1  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTATTGAAAATACTTTTTTCTTTTGTTTAATTAATATTTTATT  750

seq1  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACATCCCAAATTTTGCTCCCCTCCTGGTCCCCCCAACTGAGCTCT  800

seq1  TACACCCATACCCCTCCCCTTAACTTCTGACAGTGGGGGGACACTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCCATACCCCTCCCCTTAACTTCTGACAGTGGGGGGACACTTTTTT  850

seq1  CATATAAGATAATCTGATCAGGATTTCCCCTCCCCAAATATGCTTGTCCA  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CATATAAGATAATCTGATCAGGATTTCCCCTCCCC-AATATGCTTGTCCA  899

seq1  CACCTCTCCACCTACTCAAATCCATATCTTCTTTCTCTTTTTATTTAGGA  950
      ||||||||||||||||| ||||||||||||||||||| ||||||||||| 
seq2  CACCTCTCCACCTACTC-AATCCATATCTTCTTTCTC-TTTTATTTAGG-  946

seq1  AAAAGAGAAAAACAAAACATTTATATTTTTACTTCCTCATCATTCATTGT  1000
      |||||||||||   ||||||||||||||||||||||||||||||||| ||
seq2  AAAAGAGAAAA--CAAACATTTATATTTTTACTTCCTCATCATTCATGGT  994

seq1  AAATCAATAAACATGCCCATATTGCAGATGGCAAGCATCTTCTCT-CATT  1049
       |||||||||||||| |||||| |||||||||||||||| ||||| ||||
seq2  -AATCAATAAACATG-CCATATGGCAGATGGCAAGCATC-TCTCTCCATT  1041

seq1  TTGCTTATGCA--ATATTAGACACATTACATGGCAAAATAATGACAATAT  1097
      | |||||||||  |||||||||||| |||||||  |||| ||||||||||
seq2  TGGCTTATGCAATATATTAGACACA-TACATGGGCAAAT-ATGACAATAT  1089

seq1  TC  1099
      ||
seq2  TC  1091


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