BAC Information

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BAC

Clone NameB6Ng01-232H15
Chromosome13 (Build37)
Map Location 86,301,546 - 86,302,596
singlet/doubletsinglet
Overlap genenone
Upstream geneCcnh, Rasa1, LOC435373, LOC675662, Cox7c
Downstream geneLOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232H15.bB6Ng01-232H15.g
ACCGA044807GA044808
length9131,040
definitionB6Ng01-232H15.b B6Ng01-232H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaattgctgagtagtacttcattgtgtaaatgtaac
acattttctgtatccattcttctgttgagggacatctccgttctttccag
cttctggctataataaataaggctgctatgaacatagtggagtatgcgtc
cttattaccagttggaacttcttctgggtatatgcccaggagaggaatca
ctggatcttctggtagtactatctctaatgactatcttgtaaaaagcaat
ctacagattcaatacaatccccatcaatattccaactaaattattcaaag
atttagaaagggcaatttgaaaacgtcatctggaataacaaaaaacctag
gttagcaaaaactctacacaatgataaaagaacctctggtggaatcacca
tgcctaacctaaagctgtactacagagcaattgtgataaaactgcatggt
actggtacaaaaacaaacaggtaaaccaatggaatagaattgaagaccca
gaaaagaattcacacacctatggtcacttgatcattgacaagggacttaa
aactatacagtggaaaaaaaaaaaaaagacagcattttcaacaaatggtg
ctggcacatgaggttatcatgtagaagaatgcaaattgatccattcttat
ctccttgtacaaagctcaagtctaaagtggatcaaggaactccacataaa
actagagacactgaaacttgtagaggagaaagtagggataagccctcgaa
gatatgggctcaggggaaattttcctgaactggaaaacaatggcttttgc
tgtaagatcaagaattttataaatgggacctcataaaatttgcaaagctt
tggtaaaggcaaaagacactgtcaataaaacaagaaaggccacccacaga
ttgggaaaggatc

gaattctaaaggtaggtgtaccatggaattttcaagaaatagtaaaactg
agagaatagcaaaatatccacagtttttttctgtacatggccgtggtaag
gattacagttccagagccatcctcctccatgttttaacccaagatctacc
atctcttagaagaaattcatatctatcctgagttctcatagtttccagac
tgaagatgttaggatgataatgtttacttttccattccaacctctgtttc
ttcaaatccacccagatattctttatattttcacttatgcataacatgtc
tcatttctaccattgttccatgtgccttgctattgcagtaaacaaaaagg
gttgttagaaactatgacattttagttatgtttctaagaaccactagaaa
tcaaatttttgtttaagtcttggagtgttatatagaactttccagcaaat
atatgcacgtggttacatctcaagaatcaaaatgaagaaaaaaaaaaaaa
aagccaggcatggtggcgcatgcctttaatcccagcattcgggaggcaga
ggcaggcgaattttctgagtttgaggccagcctgctctacaaaaaagagt
tccaggatagccaggcgctgtacagagaaactctgtctcaaaaaaaataa
aataaacaaaaataaaagaaagaatcaaaatgatgagaggagagtatgtt
accgttgtgatgacacagctgtcactttcagtaatggtggctattctgac
acaaggcttcagtgtagccacatgaaagagcaagcatgggagaagcaatt
ttgatatttacccttaaacacagtttatggctccagaaggagtgctttct
ttgatatcacattactaaatcacattaacacgacattaacatgttgtttg
ctctgggaaagaaatatactggacatttcattattgcagtgtagcattaa
gtttacttctccatccctcgatattagagatcatttggctcaatttataa
gttcagcatatcatttctttctttgctttgatcagtttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86301546_86302596
seq2: B6Ng01-232H15.g_70_1109

seq1  GAATTCTAAAGGTAGGTGTACCATGGAATTTTCAAGAAATAGTAAAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAAGGTAGGTGTACCATGGAATTTTCAAGAAATAGTAAAACTG  50

seq1  AGAGAATAGCAAAATATCCACAGTTTTTTTCTGTACATGGCCGTGGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAGCAAAATATCCACAGTTTTTTTCTGTACATGGCCGTGGTAAG  100

seq1  GATTACAGTTCCAGAGCCATCCTCCTCCATGTTTTAACCCAAGATCTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGTTCCAGAGCCATCCTCCTCCATGTTTTAACCCAAGATCTACC  150

seq1  ATCTCTTAGAAGAAATTCATATCTATCCTGAGTTCTCATAGTTTCCAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAGAAGAAATTCATATCTATCCTGAGTTCTCATAGTTTCCAGAC  200

seq1  TGAAGATGTTAGGATGATAATGTTTACTTTTCCATTCCAACCTCTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGTTAGGATGATAATGTTTACTTTTCCATTCCAACCTCTGTTTC  250

seq1  TTCAAATCCACCCAGATATTCTTTATATTTTCACTTATGCATAACATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCCACCCAGATATTCTTTATATTTTCACTTATGCATAACATGTC  300

seq1  TCATTTCTACCATTGTTCCATGTGCCTTGCTATTGCAGTAAACAAAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTACCATTGTTCCATGTGCCTTGCTATTGCAGTAAACAAAAAGG  350

seq1  GTTGTTAGAAACTATGACATTTTAGTTATGTTTCTAAGAACCACTAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTAGAAACTATGACATTTTAGTTATGTTTCTAAGAACCACTAGAAA  400

seq1  TCAAATTTTTGTTTAAGTCTTGGAGTGTTATATAGAACTTTCCAGCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTTGTTTAAGTCTTGGAGTGTTATATAGAACTTTCCAGCAAAT  450

seq1  ATATGCACGTGGTTACATCTCAAGAATCAAAATGAAGAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACGTGGTTACATCTCAAGAATCAAAATGAAGAAAAAAAAAAAAA  500

seq1  AAGCCAGGCATGGTGGCGCATGCCTTTAATCCCAGCATTCGGGAGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGCATGGTGGCGCATGCCTTTAATCCCAGCATTCGGGAGGCAGA  550

seq1  GGCAGGCGAA-TTTCTGAGTTTGAGGCCAGCCTGCTCTAC-AAAAAGAGT  598
      |||||||||| ||||||||||||||||||||||||||||| |||||||||
seq2  GGCAGGCGAATTTTCTGAGTTTGAGGCCAGCCTGCTCTACAAAAAAGAGT  600

seq1  TCCAGGATAGCCAGG-GCTGTACAGAGAAACTCTGTCTCAAAAAAA--TA  645
      ||||||||||||||| ||||||||||||||||||||||||||||||   |
seq2  TCCAGGATAGCCAGGCGCTGTACAGAGAAACTCTGTCTCAAAAAAAATAA  650

seq1  AATAAACAAAAATAAAAGAAAGAATCAAAATGATGAGAGGAGAGTATGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAAAAATAAAAGAAAGAATCAAAATGATGAGAGGAGAGTATGTT  700

seq1  ACCGTTGTGATGACACAGCTGTCACTTTCAGTAATGGTGGCTATTCTGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTTGTGATGACACAGCTGTCACTTTCAGTAATGGTGGCTATTCTGAC  750

seq1  ACAAGGCTTCAGTGTTAGCCACATGAAAGAGCAAGCAGGGGAGAAGCAAT  795
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  ACAAGGCTTCAGTG-TAGCCACATGAAAGAGCAAGCATGGGAGAAGCAAT  799

seq1  TTTGATATTTACCCTTAAACACAGTTTATGGCTCCAGAAGGAGTGCTTTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATTTACCCTTAAACACAGTTTATGGCTCCAGAAGGAGTGCTTTC  849

seq1  TTTGATATCACATTAACAAAATCACATTTAACACAGACATTAACATGTTG  895
      |||||||||||||| || |||||||| ||||||| |||||||||||||||
seq2  TTTGATATCACATT-ACTAAATCACA-TTAACAC-GACATTAACATGTTG  896

seq1  TTTTGCTCTGGGAAAGAAATATACTGGACATTTTCATTATTGTAAGTGTA  945
       ||||||||||||||||||||||||||||| |||||||||||  ||||||
seq2  -TTTGCTCTGGGAAAGAAATATACTGGACA-TTTCATTATTG-CAGTGTA  943

seq1  GCATTATGTTTAACTCTCCATCCCTCGATATTTAGAAGAATCATTTGGCT  995
      |||||| |||||  |||||||||||||||| |||||   |||||||||||
seq2  GCATTAAGTTTACTTCTCCATCCCTCGATA-TTAGA--GATCATTTGGCT  990

seq1  CATTTTATAGTTTTCATGCCAATTATCAATTTCTTCTTTGCTTTTGATCA  1045
      || ||||||   |||| ||    ||||| ||  |||||||| ||||||||
seq2  CAATTTATA-AGTTCA-GC---ATATCATTTCTTTCTTTGC-TTTGATCA  1034

seq1  GTTTGA  1051
      ||||||
seq2  GTTTGA  1040


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