BAC Information

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BAC

Clone NameB6Ng01-233I10
Chromosome13 (Build37)
Map Location 87,233,710 - 87,234,797
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042887, LOC100042893
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233I10.bB6Ng01-233I10.g
ACCGA045560GA045561
length1,088762
definitionB6Ng01-233I10.b B6Ng01-233I10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacagaaatcatagaggtttgtttacatatgcttataggttca
ttcaacagggcatgcttaggtagatttttagagtgcaatccaaacacaac
tgcttacagatactaccatttgtggttgactgggattttctagatgaatt
aacaatcatgatgcagtcccacatatagttgttcatgccaatctgatctc
agaatttttttctattattttacctttctagtactctaaattatgttgag
ttggaatgttaaacgaaatagcatgcattatagcataaacttcttttgtc
tatttgcttaaaagacttgaatataaaacatggcaaacaaaactctaaca
tacattattttttttaaaaaactttctggaaatataattccagtttgata
ctttgaaaaggcatgggaacttcaacatattctttgttttagttgaaaga
atttgaaaaataaaaattttactttgcatataccaaattatcttttactc
atttggtccctttatgaacatattttcttataaaatattttatttttaaa
tctacaataaaacaaattatatcattaaaataattggcatttgtgttact
tgtatttgaaatataacagccaagaaaaatctaccagttaagccctggca
ttgctgacatatccctttctatatttttcttgtgtctgagtgtttcttgc
ctgcaatgcctccagtagtataaacttattctggtgttttgaacatagca
tgctaatttcctctatggagtctaatgtgtgtatatccccatgcttactt
aaaagctatcccaaagtgtaccaatgaatcatgcctggtatttaagcatt
tcagaacttcaatataagaattaggagttgagggaagattgaggggcaat
gtgtatagaaatgtactacagtcgaaacaattatagtatttttccagaat
atatgcttagtataaccaaggaactcttttttgatttgtactctgtaatt
atgcatgtacctctcaccgtttgagtattttaggaacatatattttattt
tatagtttgcttattatgaactctggttaattccatat

gaattcaatgtggcagctcctcagaaaattcgacatattactatttgagg
acccagctataccacttctaggcatatgctcagaagatgccccaacatgt
aatgagaaatgggttctgatgatgcccctctatactggcttctgttgctt
atagtcttgtgcttgtctctcaccatctgtttatccctgttgtgtgttgg
tctgggtgattctatatggagtcgatctcttttgtcctagtttgcatcag
gtctcctggtaggcttgtggccctggctgttgtggaccacctgtggatcc
ttctacctgtgggttttacagatgggcaggaaagctgctactctgttacc
ctgactgcaatagatctcctgggaggagttcagactattgggtcttcaga
ggagcagttaagctgtgtaaaactgttctctgagtggggtggccatgaac
agtggtttctgtgcccctgtgtgcaccagagctctaggcaggctttcagt
ctattgggttagttaccctgcctgccccagagccccagagccccagggag
gtcttcagagtgtggtgtctgttgctcagttgctctgtgtatagaggagc
tcctgggatgccttcaaattgtgctgtcttcagagaagcatacaagctgc
cctgtgtgtatcagatctcatgggatgattcaggctctggtgttagttgc
ctgaatgctctaagtgcagtggatcatctgggatggctcaacatgtggta
ttttcatgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87233710_87234797
seq2: B6Ng01-233I10.b_42_1129 (reverse)

seq1  ATATGGAAATTACCAGAGTTCATAAATAGCAAACTATAAA--TAAATATA  48
      |||||||| | ||||||||||||||  |||||||||||||   |||||||
seq2  ATATGGAATTAACCAGAGTTCATAATAAGCAAACTATAAAATAAAATATA  50

seq1  TG-TCCTAAAATACTCAAACGGTGAGA-GTACATGCAATAATTACAGAGT  96
      || |||||||||||||||||||||||| |||||||| |||||||||||||
seq2  TGTTCCTAAAATACTCAAACGGTGAGAGGTACATGC-ATAATTACAGAGT  99

seq1  ACAAATC-AAAAAGAGTTCCTTGGTTATACTAAGCATATTATTCTGGAAA  145
      ||||||| |||||||||||||||||||||||||||||| |||||||||||
seq2  ACAAATCAAAAAAGAGTTCCTTGGTTATACTAAGCATA-TATTCTGGAAA  148

seq1  AATACTATAATTGTTTCGACTGTAGTACATTTTCTATACACATTGCCCCC  195
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  AATACTATAATTGTTTCGACTGTAGTACA-TTTCTATACACATTG-CCCC  196

seq1  TCAATCTTCCCTCAAACTCCTAATTCTTATATTGAAGTTCTGAAATGCTT  245
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAATCTTCCCTC-AACTCCTAATTCTTATATTGAAGTTCTGAAATGCTT  245

seq1  AAATACCAGGCATGATTCATTGGTACACTTTGGGATAGCTTTTAAGTAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAGGCATGATTCATTGGTACACTTTGGGATAGCTTTTAAGTAAG  295

seq1  CATGGGGATATACACACATTAGACTCCATAGAGGAAATTAGCATGCTATG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGGATATACACACATTAGACTCCATAGAGGAAATTAGCATGCTATG  345

seq1  TTCAAAACACCAGAATAAGTTTATACTACTGGAGGCATTGCAGGCAAGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACACCAGAATAAGTTTATACTACTGGAGGCATTGCAGGCAAGAA  395

seq1  ACACTCAGACACAAGAAAAATATAGAAAGGGATATGTCAGCAATGCCAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGACACAAGAAAAATATAGAAAGGGATATGTCAGCAATGCCAGG  445

seq1  GCTTAACTGGTAGATTTTTCTTGGCTGTTATATTTCAAATACAAGTAACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACTGGTAGATTTTTCTTGGCTGTTATATTTCAAATACAAGTAACA  495

seq1  CAAATGCCAATTATTTTAATGATATAATTTGTTTTATTGTAGATTTAAAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCCAATTATTTTAATGATATAATTTGTTTTATTGTAGATTTAAAA  545

seq1  ATAAAATATTTTATAAGAAAATATGTTCATAAAGGGACCAAATGAGTAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATTTTATAAGAAAATATGTTCATAAAGGGACCAAATGAGTAAA  595

seq1  AGATAATTTGGTATATGCAAAGTAAAATTTTTATTTTTCAAATTCTTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTTGGTATATGCAAAGTAAAATTTTTATTTTTCAAATTCTTTCA  645

seq1  ACTAAAACAAAGAATATGTTGAAGTTCCCATGCCTTTTCAAAGTATCAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAACAAAGAATATGTTGAAGTTCCCATGCCTTTTCAAAGTATCAAA  695

seq1  CTGGAATTATATTTCCAGAAAGTTTTTTAAAAAAAATAATGTATGTTAGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTATATTTCCAGAAAGTTTTTTAAAAAAAATAATGTATGTTAGA  745

seq1  GTTTTGTTTGCCATGTTTTATATTCAAGTCTTTTAAGCAAATAGACAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTGCCATGTTTTATATTCAAGTCTTTTAAGCAAATAGACAAAA  795

seq1  GAAGTTTATGCTATAATGCATGCTATTTCGTTTAACATTCCAACTCAACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTATGCTATAATGCATGCTATTTCGTTTAACATTCCAACTCAACA  845

seq1  TAATTTAGAGTACTAGAAAGGTAAAATAATAGAAAAAAATTCTGAGATCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAGAGTACTAGAAAGGTAAAATAATAGAAAAAAATTCTGAGATCA  895

seq1  GATTGGCATGAACAACTATATGTGGGACTGCATCATGATTGTTAATTCAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCATGAACAACTATATGTGGGACTGCATCATGATTGTTAATTCAT  945

seq1  CTAGAAAATCCCAGTCAACCACAAATGGTAGTATCTGTAAGCAGTTGTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATCCCAGTCAACCACAAATGGTAGTATCTGTAAGCAGTTGTGT  995

seq1  TTGGATTGCACTCTAAAAATCTACCTAAGCATGCCCTGTTGAATGAACCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGCACTCTAAAAATCTACCTAAGCATGCCCTGTTGAATGAACCT  1045

seq1  ATAAGCATATGTAAACAAACCTCTATGATTTCTGTTTGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATATGTAAACAAACCTCTATGATTTCTGTTTGAATTC  1088


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