BAC Information

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BAC

Clone NameB6Ng01-241H12
Chromosome13 (Build37)
Map Location 62,857,740 - 62,858,847
singlet/doubletsinglet
Overlap genenone
Upstream geneBC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366
Downstream geneLOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241H12.bB6Ng01-241H12.g
ACCGA051373GA051374
length1,1811,102
definitionB6Ng01-241H12.b B6Ng01-241H12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattcaatggctgagaagcacctaaagaaata
gtcaacatccttagtcatcatggaaatgcaaatcaaaacaactctgagat
tccacctcacaccagtcagaatgggtaagatcaaaatttcaagtgacagc
agatgttggtgaggatttggcaaaagaggaatactcctccattgttggtg
gaattgcaagctggtacaaccactctggaaatcagtcttgagtttcttta
gaaaactggacatagtactacctcagaacccagctataccacttctgtgc
atatacccaaaagatgctccaacatataacaaggacacatgttccattat
gttcatagcagccttatttataacagccagaagctgcaaagaactcagat
gtccttcaacataggattggatacagaaaatgtggaataatttacacaat
ggagtactactaaggtattaaaaacaatgacttcatgaaattcttagaaa
aattgatggaaatagacaatatcatcctgaatgaggtaacccagtcaaaa
aggacacacatggtatgcactcactgataagcagatattagctcaaaagc
taggcataccaaagatacaattaacagaccatatcaagggctagaagaag
gaacaccaaaatgtgaatgcttcagtccttcttagcagggggaagacaat
actcatgggacggaaagtgtggagggacttggcaagaagtgaggagtgga
agggaggaaaaaggggacaggaccaagtatgggaggagagagggatgata
tacagagggtcaggaatttgagcacaggtgtgtagcaatggggaaagggg
gatctggggaccagctagtccaagatgcttgaaagcaaaaggctcccagg
accctaagagggatgagagtagttgaaatgcccaacaaaggagggaggaa
ccattagagaccatattcctgtgtttagggcaaagcctccagttaggagc
cctgaggacaccccacctcatcttcagattcctacccagatgggcttctt
tccaagggaaagaagggcacaagtatgatcagagaactgatggataagat
catcagagacttggtcacttgggaatccattccgtatgcagactgctact
gttacatgaactttgtgacccaaagtgcgga
gaattcatgctgtttcctaggctgggtcttctttgggcatcagccagagg
tgaataagtgatctctccctgggaaagatgttaatccacaccagctgtac
ctgcaggctttaaataatgtttctgagacaagctttcctaggttgagtca
ggtagcattgattccgctctgtttttccccaggacagtgacattgttctc
ctcttgactaaaccaactaaatacttaagtctaaatctctatcaccactg
tgtttttaaattacttgctgagtcatgtatgtaatcaacttttttattac
agtaagaggaacaggatttgcctgacaggaatagcttctgcattcacacc
agaagataagggagtttattgtgatccctactggggaaacagggtaggca
atcagctgctggagttcccactatgaacaagacctgcttatggaagggag
gtgatttttaattttggatcatgtattaatcacattctgtgatgaagaca
gcctatattgatgggtgtttgagttgtgaatgtcagttaagccagtgagt
attcaatttgcatgtagggtactgttctacagatacatgtgcaatcttca
ctgacatcattaagtcagctcaggaattgaaacccaggccatcgggtgta
gttgcgtgtgtcaagatacaggtgtcagcacttaagaatccacatagagg
caagttcaaatagtgtttgattaatgctattcctgatgtgaggatatggg
ctgctagttttgaatgtcagtattggtatgctgttttttagtaatattta
agtttgaaaaaatcaattattggttcccctttcaatgtaatttctgtgaa
ttcagctctgctctgatctcttcctatttgcaattgtgttgtatttccca
ggtataacattacttttcattttttacagtaggtttaggacaaggtctct
tgatgcccaggttggctcatgctatgtattgataactgcttgcacatctg
tctgtcctaagaccacatgatgggagacagtgctgcattcttcttctagc
ttaggctttgaaggggcatagttttcttggcttggccagtacttgactta
gc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62857740_62858847
seq2: B6Ng01-241H12.g_65_1166 (reverse)

seq1  GCTAATGTCAAGTACT-GCCAAACCAGGAAAACTAT-CCCCTTCAAAGCC  48
      ||||| |||||||||| ||||| ||| ||||||||| |||||||||||||
seq2  GCTAA-GTCAAGTACTGGCCAAGCCAAGAAAACTATGCCCCTTCAAAGCC  49

seq1  TAGGCTAGAAGA--GATGCAGCACTGTCTTCCCATCATGTGGTCTTAGGG  96
      || |||||||||   ||||||||||||| |||||||||||||||||| ||
seq2  TAAGCTAGAAGAAGAATGCAGCACTGTC-TCCCATCATGTGGTCTTA-GG  97

seq1  ACAGGACCAGATGTGCAAAGCAGTTATCAATTACATAGCATGAGCCAACC  146
      ||||   ||||||||| ||||||||||||| |||||||||||||||||||
seq2  ACAG--ACAGATGTGC-AAGCAGTTATCAA-TACATAGCATGAGCCAACC  143

seq1  TGGGCATCAAGAGACCTTGTCCTAAACCTACCTTGTAAAAAATGAAAAGT  196
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  TGGGCATCAAGAGACCTTGTCCTAAACCTAC--TGTAAAAAATGAAAAGT  191

seq1  AATTGTTATACCTGGGAAATACAACACAATTGCAAATAGGAAGAGATCAG  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-TGTTATACCTGGGAAATACAACACAATTGCAAATAGGAAGAGATCAG  240

seq1  AGCAGAGCTGAATTCACAGAAATTACATTGAAAGGGGAACCAATAATTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCTGAATTCACAGAAATTACATTGAAAGGGGAACCAATAATTGA  290

seq1  TTTTTTCAAACTTAAATATTACTAAAAAACAGCATACCAATACTGACATT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAACTTAAATATTACTAAAAAACAGCATACCAATACTGACATT  340

seq1  CAAAACTAGCAGCCCATATCCTCACATCAGGAATAGCATTAATCAAACAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTAGCAGCCCATATCCTCACATCAGGAATAGCATTAATCAAACAC  390

seq1  TATTTGAACTTGCCTCTATGTGGATTCTTAAGTGCTGACACCTGTATCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAACTTGCCTCTATGTGGATTCTTAAGTGCTGACACCTGTATCTT  440

seq1  GACACACGCAACTACACCCGATGGCCTGGGTTTCAATTCCTGAGCTGACT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACGCAACTACACCCGATGGCCTGGGTTTCAATTCCTGAGCTGACT  490

seq1  TAATGATGTCAGTGAAGATTGCACATGTATCTGTAGAACAGTACCCTACA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATGTCAGTGAAGATTGCACATGTATCTGTAGAACAGTACCCTACA  540

seq1  TGCAAATTGAATACTCACTGGCTTAACTGACATTCACAACTCAAACACCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTGAATACTCACTGGCTTAACTGACATTCACAACTCAAACACCC  590

seq1  ATCAATATAGGCTGTCTTCATCACAGAATGTGATTAATACATGATCCAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATAGGCTGTCTTCATCACAGAATGTGATTAATACATGATCCAAA  640

seq1  ATTAAAAATCACCTCCCTTCCATAAGCAGGTCTTGTTCATAGTGGGAACT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATCACCTCCCTTCCATAAGCAGGTCTTGTTCATAGTGGGAACT  690

seq1  CCAGCAGCTGATTGCCTACCCTGTTTCCCCAGTAGGGATCACAATAAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGCTGATTGCCTACCCTGTTTCCCCAGTAGGGATCACAATAAACT  740

seq1  CCCTTATCTTCTGGTGTGAATGCAGAAGCTATTCCTGTCAGGCAAATCCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCTTCTGGTGTGAATGCAGAAGCTATTCCTGTCAGGCAAATCCT  790

seq1  GTTCCTCTTACTGTAATAAAAAAGTTGATTACATACATGACTCAGCAAGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCTTACTGTAATAAAAAAGTTGATTACATACATGACTCAGCAAGT  840

seq1  AATTTAAAAACACAGTGGTGATAGAGATTTAGACTTAAGTATTTAGTTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAAACACAGTGGTGATAGAGATTTAGACTTAAGTATTTAGTTGG  890

seq1  TTTAGTCAAGAGGAGAACAATGTCACTGTCCTGGGGAAAAACAGAGCGGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCAAGAGGAGAACAATGTCACTGTCCTGGGGAAAAACAGAGCGGA  940

seq1  ATCAATGCTACCTGACTCAACCTAGGAAAGCTTGTCTCAGAAACATTATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGCTACCTGACTCAACCTAGGAAAGCTTGTCTCAGAAACATTATT  990

seq1  TAAAGCCTGCAGGTACAGCTGGTGTGGATTAACATCTTTCCCAGGGAGAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTGCAGGTACAGCTGGTGTGGATTAACATCTTTCCCAGGGAGAG  1040

seq1  ATCACTTATTCACCTCTGGCTGATGCCCAAAGAAGACCCAGCCTAGGAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTATTCACCTCTGGCTGATGCCCAAAGAAGACCCAGCCTAGGAAA  1090

seq1  CAGCATGAATTC  1108
      ||||||||||||
seq2  CAGCATGAATTC  1102