BAC Information

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BAC

Clone NameB6Ng01-243K07
Chromosome13 (Build37)
Map Location 26,660,914 - 26,661,420
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC214973, LOC666221, LOC100042180
Downstream geneLOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957, Prl, Prl3d1, Prl3d2, Prl3d3, Prl3c1, Prl3b1, Prl3a1, Prl6a1, Prl8a2, Prl2b1, Prl8a6, Prl8a8, Prl8a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243K07.bB6Ng01-243K07.g
ACCGA052970GA052971
length5011,159
definitionB6Ng01-243K07.b B6Ng01-243K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatttttaaaagttcaagattgttggaacattacttccttgttttgtatt
tcttccagcatttaccatagaactactgagaaagaaggatcataaaaatt
aatgaatggatggttatgtaagtgaatatatgaatgcatgaataagtgat
gcagaacttaagagcacaggaagtttctgtgatgcagtaaactttacata
acttattcaggatcatcactagaagataaaacagagccatattatgaaga
caaggcaggaagaatgcttacgtagtctggaatttttttaaggtgaagaa
tctctcttgttcctttgagcagcttataatttattgaaaaataaatcttg
tctcggtgttgaattcagtaccctaaaataacatgataatgatatagcca
cttgatctaaaaggaaaactggaagtttcagtcagctttaaaataaaaca
ggagagcaaaatgagcccccagttgtgtgcagggggttgggggtggggga
g
gaattctcacctgaggaattccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaacatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgctcctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcttagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atgggaggagctagagaaagtagccaaggagctaaagggatctgcaccct
atagtgaacaacattagaactagccagtaccccggagctcttgactctag
ctgcctatgtatcaaaggatgcttagtcagcatcaacttgaaagagagtc
catgacatgcaacttaattgaccagtacaggagcagtcaaaggggaatgg
gttggcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26660914_26661420
seq2: B6Ng01-243K07.b_45_551

seq1  GAATTCAATTTTTAAAAGTTCAAGATTGTTGGAACATTACTTCCTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTTAAAAGTTCAAGATTGTTGGAACATTACTTCCTTGTTT  50

seq1  TGTATTTCTTCCAGCATTTACCATAGAACTACTGAGAAAGAAGGATCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCTTCCAGCATTTACCATAGAACTACTGAGAAAGAAGGATCATA  100

seq1  AAAATTAATGAATGGATGGTTATGTAAGTGAATATATGAATGCATGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAATGAATGGATGGTTATGTAAGTGAATATATGAATGCATGAATA  150

seq1  AGTGATGCAGAACTTAAGAGCACAGGAAGTTTCTGTGATGCAGTAAACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGCAGAACTTAAGAGCACAGGAAGTTTCTGTGATGCAGTAAACTT  200

seq1  TACATAACTTATTCAGGATCATCACTAGAAGATAAAACAGAGCCATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAACTTATTCAGGATCATCACTAGAAGATAAAACAGAGCCATATTA  250

seq1  TGAAGACAAGGCAGGAAGAATGCTTACGTAGTCTGGAATTTTTTTAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACAAGGCAGGAAGAATGCTTACGTAGTCTGGAATTTTTTTAAGGT  300

seq1  GAAGAATCTCTCTTGTTCCTTTGAGCAGCTTATAATTTATTGAAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATCTCTCTTGTTCCTTTGAGCAGCTTATAATTTATTGAAAAATAA  350

seq1  ATCTTGTCTCGGTGTTGAATTCAGTACCCTAAAATAACATGATAATGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTCTCGGTGTTGAATTCAGTACCCTAAAATAACATGATAATGATA  400

seq1  TAGCCACTTGATCTAAAAGGAAAACTGGAAGTTTCAGTCAGCTTTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTTGATCTAAAAGGAAAACTGGAAGTTTCAGTCAGCTTTAAAAT  450

seq1  AAAACAGGAGAGCAAAATGAGCCCCCAGTTGTGTGCAGGGGGTTGGGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGAGAGCAAAATGAGCCCCCAGTTGTGTGCAGGGGGTTGGGGGT  500

seq1  GGGGGAG  507
      |||||||
seq2  GGGGGAG  507