BAC Information

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BAC

Clone NameB6Ng01-244D15
Chromosome13 (Build37)
Map Location 87,401,146 - 87,402,295
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D15.bB6Ng01-244D15.g
ACCGA053414GA053415
length1,2011,138
definitionB6Ng01-244D15.b B6Ng01-244D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttgtgaatgtgttacctcactcaggatgatgccctccagatc
catccatttgcctaggaatttcatatattcattctttttaatggctgagt
agtactccattgtgtaaatgtaccacattttctgtatccattcctctttt
gaggggcatctgggtactttccagcttctggctgttataaataaggctgc
tatgaacatagtggagcatgtgtccttcttaccggttgggacatcttctg
gatatatgcccaggagaggtattgctggatcctctggtagtactatgtcc
aattttcagaggaaccgccagactgatttcagagtgtttgtacaagcctg
caatcccaccaacaatggaagagcgttcctctttcttcacatccttgcca
gcatctgctgtcacctgaatttttcatcttagccattctgactggtgtga
ggtggaatctcagggttgttttgatttgcatttccctgatgattaaggat
gttgaacattttttcaggtgcttctctgccattcggtattcctcaggtga
gaattctttgtccagttcttagccccaattttaaattgggttatttgatt
ttctggagtctaccttcttgaattctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgttttattgatggtgtcttttgccttgcagaagctttggagtttta
tgaggtcccatttgtcaattcttaatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgcacccatatcttcgaggcttttccccac
tttctcctctctaagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtaaaggagattggtatgcatcgattcgca
tttcttctacatgataaaaaaccagttgtgccagctgaaaatttgaattg
tttgaaaattctgtcttttcttccacctgggatggattttagcctccctg
tcggagattcaagtgacccattaggtgttgtgggttcaatttctggtctt
cattctaattcgttggtctactggtctgtcagttaaccagtaccatggcc
agcttttatacacattggcttcgtggagtaaagggtctctgaattctagc
a
gaattccaggacagccagggctatacagagaaaccctgtctcgaaaaaaa
acaaaaacaaaaaacaaaaacaaacaaacaaaaaaacaaacaaacaaaca
aaacagaaaagaaaaagaaaggaagaaagaaagaaagaaaagaaagaaag
aaaaagaaagaaatggtaagtgcaaaatctcttttgcctgggttaatttt
tataacacaccttcatattttacacagaagacatatttcatggaattact
catattttctttttataattgaatattttattatatacatttcaaatgtt
atccccttttccaatttccctccagaaaacctatcccatcccctctcttc
ctccttctatgagagtgtaccctcacccacccacacacccacccactcct
gcctcccagcaaaagcattcccctacactgaagccttcactggaccaagg
gcctcttctctcactgacgcctaacaaggccatcctctgctatatatgca
tatgggtagtacctcaatgtgtactccttgggtagtggtttagactctgg
gatctctggttggttgatattgctattcttcctatggggttgcaaacccc
ttcagctccttctgtcctttttctaactcctccattggggattccgttat
cagttaaatggttggctgcaagcatcctcctctgtatgtcagctctgtca
aagtctctcagagtcagctatatcaggctcctgttggcatgcacttcttg
gcatccacaattgtttctaaattaggtgactgtatatggaatggatcccc
agatggggcagtctctaaatggcctttccttaagtctctgctccataact
tgtgtccatatttgctcctgtgaatattttgttaccctttctacaaatga
ccaaaggacccatattttggtcttccttctctagagcttcatgtggtcta
tgaattgtatcttggaatattcagagctttgatctatatcactcatgttt
ttcaacttcctgtctgattagaaattattaaaggattcactacagtgtct
aatatactcctacatatagataaatcttatgaatatgacattatttacat
agatgtagataatctctagtagatttaagtggtaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87401146_87402295
seq2: B6Ng01-244D15.g_67_1204

seq1  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAAA  50

seq1  ACAAAAACAAAAAACAAAAACAAACAAACAAAAAAACAAACAAACAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAAAACAAAAACAAACAAACAAAAAAACAAACAAACAAACA  100

seq1  AAACAGAAAAGAAAAAGAAAGGAAGAAAGAAAGAAAGAAAAGAAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAAGAAAAAGAAAGGAAGAAAGAAAGAAAGAAAAGAAAGAAAG  150

seq1  AAAAAGAAAGAAATGGTAAGTGCAAAATCTCTTTTGCCTGGGTTAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAGAAATGGTAAGTGCAAAATCTCTTTTGCCTGGGTTAATTTT  200

seq1  TATAACACACCTTCATATTTTACACAGAAGACATATTTCATGGAATTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACACACCTTCATATTTTACACAGAAGACATATTTCATGGAATTACT  250

seq1  CATATTTTCTTTTTATAATTGAATATTTTATTATATACATTTCAAATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTCTTTTTATAATTGAATATTTTATTATATACATTTCAAATGTT  300

seq1  ATCCCCTTTTCCAATTTCCCTCCAGAAAACCTATCCCATCCCCTCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTTTCCAATTTCCCTCCAGAAAACCTATCCCATCCCCTCTCTTC  350

seq1  CTCCTTCTATGAGAGTGTACCCTCACCCACCCACACACCCACCCACTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTATGAGAGTGTACCCTCACCCACCCACACACCCACCCACTCCT  400

seq1  GCCTCCCAGCAAAAGCATTCCCCTACACTGAAGCCTTCACTGGACCAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCAGCAAAAGCATTCCCCTACACTGAAGCCTTCACTGGACCAAGG  450

seq1  GCCTCTTCTCTCACTGACGCCTAACAAGGCCATCCTCTGCTATATATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTCTCTCACTGACGCCTAACAAGGCCATCCTCTGCTATATATGCA  500

seq1  TATGGGTAGTACCTCAATGTGTACTCCTTGGGTAGTGGTTTAGACTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTAGTACCTCAATGTGTACTCCTTGGGTAGTGGTTTAGACTCTGG  550

seq1  GATCTCTGGTTGGTTGATATTGCTATTCTTCCTATGGGGTTGCAAACCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGGTTGGTTGATATTGCTATTCTTCCTATGGGGTTGCAAACCCC  600

seq1  TTCAGCTCCTTCTGTCCTTTTTCTAACTCCTCCATTGGGGATTCCGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTCCTTCTGTCCTTTTTCTAACTCCTCCATTGGGGATTCCGTTAT  650

seq1  CAGTTAAATGGTTGGCTGCAAGCATCCTCCTCTGTATGTCAGGCTCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGTTAAATGGTTGGCTGCAAGCATCCTCCTCTGTATGTCA-GCTCTGTC  699

seq1  AAAGTCTCTCAGGAGTCAGCTATATCAGGCTCCTGTTGGCATGCACTTCT  750
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTCTCA-GAGTCAGCTATATCAGGCTCCTGTTGGCATGCACTTCT  748

seq1  TGGCATCCACAATTGTTTCTAAATTAGGTGACTGTATATGGAATGGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCCACAATTGTTTCTAAATTAGGTGACTGTATATGGAATGGATCC  798

seq1  CCAGATGGGGCAGTCTCTAAATGGCCTTTCCTTAAGTCTCTGCTCCATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGGGCAGTCTCTAAATGGCCTTTCCTTAAGTCTCTGCTCCATAA  848

seq1  CTTGTGTCCATATTTGCTCCTGTGAATATTTTGTTACCCTTTCTACAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTCCATATTTGCTCCTGTGAATATTTTGTTACCCTTTCTACAAAT  898

seq1  GACCAAAGGACCCATATTTTGGTCTTCCTTCTTCTAGAGCTTCATGTGGT  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACCAAAGGACCCATATTTTGGTCTTCCTTC-TCTAGAGCTTCATGTGGT  947

seq1  CTATGAATTGTATCTTGG-ATATTCAGAGCTTTTGATCTAATATCCACTC  999
      |||||||||||||||||| ||||||||||| |||||||| |||| |||||
seq2  CTATGAATTGTATCTTGGAATATTCAGAGC-TTTGATCT-ATAT-CACTC  994

seq1  ATG-TTTTCAAC-TCCTGTCTGATTAGAAAATTATTAAA-GATTCAACTA  1046
      ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||
seq2  ATGTTTTTCAACTTCCTGTCTGATTAG-AAATTATTAAAGGATTC-ACTA  1042

seq1  CAGTGTCTAATATACTCCCTACATATAAGATAAATCTTATGAAATATGAC  1096
      |||||||||||||||| ||||||||| |||||||||||||| ||||||||
seq2  CAGTGTCTAATATACT-CCTACATAT-AGATAAATCTTATG-AATATGAC  1089

seq1  ATTAATTTTAACATAGAATGTAGATAAATCTCTAGTTAAGATTT-AGT-G  1144
      ||||   || |||||| |||||||| ||||||||||  |||||| ||| |
seq2  ATTA---TTTACATAG-ATGTAGAT-AATCTCTAGT--AGATTTAAGTGG  1132

seq1  TAAAAA  1150
      ||||||
seq2  TAAAAA  1138