BAC Information

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BAC

Clone NameB6Ng01-244M23
Chromosome13 (Build37)
Map Location 96,156,561 - 96,157,529
singlet/doubletsinglet
Overlap genenone
Upstream geneAp3b1, Tbca, Otp, Wdr41, Pde8b, Zbed3, Aggf1
Downstream geneCrhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2, Sv2c, LOC667582
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244M23.bB6Ng01-244M23.g
ACCGA053854GA053855
length981715
definitionB6Ng01-244M23.b B6Ng01-244M23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtaaaggtggaaagagaaaacaggcaccacaaagttgtcctc
tgacctccacatgtgtgcagtgacacacatgactgtcccacacatacatg
tatcacatcacacaatacacatcacacacacacacacacacacatacaga
tcacacaaatgtacatgcacatcacacacacacatcaaatcacacataca
tactcatatcacatcatacacatacacacatcacacacacacatatatac
agatcacacaaatgcacacacacatcacatcatacacacatcatatcaca
tcacattacacacatacatcacacacatatacacatcacacacacatcac
atcacactcacatgcacatttcatacatacatacacatacatacatcaca
cacctcacacaagcatacacaggtcacacacatatacacatcatatacac
tcatcacatacatacagatcacacaaatacatatacacatcacacataca
tacacacaccaacaataaataaaaaatgtttttgaaaaaatcaaagttag
gtcactatcattaaacaaaaatcagtatttttgctttaaggatttccttg
actatctgggagaggattaaggaactgcccaaagtcgtgtatcctcaggc
cccaaggctggctcattgctgacttaaaatttttatttgaaaatctctat
ctatatattataaaagaaatttaatctctgttttttgaaaccttcaaaca
acaaatattgttaatggcattgaaattcttgaggggtagctggcaagaga
attgaaccagtctctagagttgggcacaccttctctttcccatgtgttca
caattccccaactttgtcctgcattaagacttcgaacattggggatttcc
agagagtgctggacaagagcattttcagtatcgcagagatatgtgtgtgt
gtgtgtgtgtgtgtgtgtgttgtagtgtgtg
gaattctttaggaagtcccagagacctgggatgaaggaggctcccaggag
tcaatagaggtggccttagccaaaatgcccagtggggatatggaatccga
agaaaacacctgcagtagccagataggaccccagtggagggatagggaca
ccaacccacctacaaaactttttacccaaaatttatcctgcgtaaaagaa
ttgcagagacaaagatggagcagtgactaatggaatggcagaccagtgac
cagaccattttaggatctatcacataggcaggaaccaatccctcacacta
ttaatgatgctatgctgtgcttgcagacaggagcctaggttagcagccct
ctgagaggctttacccagcagctgactgaggctgatgcagagactcacag
acacacattcggtggaggttgaggacccctgaggaagagttaggggaagg
attgaagacccttaaggagatggcaaccccacaggaagaccaatagtgtc
aactaaccaggacccctgggaactcccataaactgagccaccaaccaaag
agcatacatgggctggtctgaggctcccaacacatatgtagcagaggact
gccttgtctggtctcggtgggagaggatgtgcctaattctgcaagacttg
atgccttagagttgggggacatgaaggggcaccctctcagaggcaaaggg
gagggggggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_96156561_96157529
seq2: B6Ng01-244M23.b_61_1028

seq1  GGTGGAAAGAGAAAACAGGCACCACAAAGTTGTCCTCTGACCTCCACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAAAGAGAAAACAGGCACCACAAAGTTGTCCTCTGACCTCCACATG  50

seq1  TGTGCAGTGACACACATGACTGTCCCACACATACATGTATCACATCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGTGACACACATGACTGTCCCACACATACATGTATCACATCACAC  100

seq1  AATACACATCACACACACACACACACACACATACAGATCACACAAATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACATCACACACACACACACACACACATACAGATCACACAAATGTA  150

seq1  CATGCACATCACACACACACATCAAATCACACATACATACTCATATCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACATCACACACACACATCAAATCACACATACATACTCATATCACA  200

seq1  TCATACACATACACACATCACACACACACATATATACAGATCACACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACACATACACACATCACACACACACATATATACAGATCACACAAAT  250

seq1  GCACACACACATCACATCATACACACATCATATCACATCACATTACACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACACATCACATCATACACACATCATATCACATCACATTACACAC  300

seq1  ATACATCACACACATATACACATCACACACACATCACATCACACTCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCACACACATATACACATCACACACACATCACATCACACTCACAT  350

seq1  GCACATTTCATACATACATACACATACATACATCACACACCTCACACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTCATACATACATACACATACATACATCACACACCTCACACAAG  400

seq1  CATACACAGGTCACACACATATACACATCATATACACTCATCACATACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACAGGTCACACACATATACACATCATATACACTCATCACATACAT  450

seq1  ACAGATCACACAAATACATATACACATCACACATACATACACACACCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCACACAAATACATATACACATCACACATACATACACACACCAAC  500

seq1  AATAAATAAAAAATGTTTTTGAAAAAATCAAAGTTAGGTCACTATCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAAAATGTTTTTGAAAAAATCAAAGTTAGGTCACTATCATTA  550

seq1  AACAAAAATCAGTATTTTTGCTTTAAGGATTTCCTTGACTATCTGGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAATCAGTATTTTTGCTTTAAGGATTTCCTTGACTATCTGGGAGA  600

seq1  GGATTAAGGAACTGCCCAAAGTCGTGTATCCTCAGGCCCCAAGGCTGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAAGGAACTGCCCAAAGTCGTGTATCCTCAGGCCCCAAGGCTGGCT  650

seq1  CATTGCTGACTTAAAATTTTTATTTGAAAATCTCTATCTATATATTATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCTGACTTAAAATTTTTATTTGAAAATCTCTATCTATATATTATAA  700

seq1  AAGAAATTTAATCTCTGTTTTTTGAAACCTTCAAACAACAAATATTGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTTAATCTCTGTTTTTTGAAACCTTCAAACAACAAATATTGTTA  750

seq1  ATGGCATTGAAATTCTTGAGGGGTAGCTGGCAAGAGAATTGAACCAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCATTGAAATTCTTGAGGGGTAGCTGGCAAGAGAATTGAACCAGTCT  800

seq1  CTAGAGTTGGGCACACCTTCTCTTTCCCATGTGTTCACAATTCCCCAACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTGGGCACACCTTCTCTTTCCCATGTGTTCACAATTCCCCAACT  850

seq1  TTGTCCTGCATTAAGACTTCGAACATTGGGGATTTCCAGAGAGTGCTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTGCATTAAGACTTCGAACATTGGGGATTTCCAGAGAGTGCTGGA  900

seq1  CAAGGAGGCATTTTCAGTAATCGCCAGAGGATATGTGTGTGTGTGTGTGT  950
      ||||   ||||||||||| |||| |||| |||||||||||||||||||||
seq2  CAAG--AGCATTTTCAGT-ATCG-CAGA-GATATGTGTGTGTGTGTGTGT  945

seq1  GTGTGTGTGTGT----GTGTGTG  969
      ||||||||||||    |||||||
seq2  GTGTGTGTGTGTTGTAGTGTGTG  968