BAC Information

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BAC

Clone NameB6Ng01-246B04
Chromosome13 (Build37)
Map Location 87,008,786 - 87,009,913
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246B04.bB6Ng01-246B04.g
ACCGA054792GA054793
length1,1381,050
definitionB6Ng01-246B04.b B6Ng01-246B04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccacacaacaacgagaaaatttgtaatctttctagtaatgta
tcactaattttccctcaattataacaaaattgatttatgtagactgttac
tttgaaatttaaaagttactttgtcagtgatcatatttatgcaaaatatt
ctgaaataattaaacacataaacacaacttctctacaataaattttgaaa
caatagctatacctgtttctatagattatataataccaagtatacctgca
attatgagacagagcagttagaatgttaaggccaatttggattataaagg
ccagggtgagaaattcaacgaaatcttatcaaaacctcacaagaaaaaaa
atgaaaacaatcatatgtggaaaacaatttcttctgaagaaagaaacatg
attcaggctcactgaagtaaataatgtaagataggtattaaaaccagggt
agtaaattagatcagcatcagtatattctcactgatttttcttattaaag
tagacaaaaatagaaaacattcgcataattgttattttctttatagaaat
agcctttacctaattgaattcaatcctaacacttaaattcatggcaatat
ttaattttaggattgtgtttaaaatactataaataattagaagtacctac
tatgatacataaacgaattctcaaaggcatggtttactgacaccatttta
atcactttgaatagagaagaaatagtttctttattgaaagttaattaaag
aataatatatttacagagacttgtatttatttatcagagaatgctaaatc
tgcctggtaactgagataacttgtaattaaaagataaattagcatttata
tttaattacaaagaaatctatacctcatttagcatttaattaaaacttgt
ttaaacaacctagctgctcagtgaattttcaaatttacataaaattacat
aataaatagcattttaatgtttattaatttagtaattttgacaattttat
tatgagtctaactatcctctagcaagttaagttttcattttattattata
tttttaaaaataactgtaatattcttttttgtcttcatgcatttttctcc
acatcttagaaacaataatattttttacctgaaaatcc

gaattctttgtttagccctgtatcccattttttaaattgagttatttgaa
tttctggatgactatttttttttaaatacactattagaaatcaatgacaa
atagtacagttttgacactagagttctttcccttcaaattttagtttgat
aattatttttaaaattaaatattaaatttaatacattctatctatattat
gttaagtatatatatatatgtttacaggacagttattgggtactggacaa
ccaactcatgtactcctccctaaagcaccacaagactcttattcccagat
ttcctcaatgacctgtatttctctctgtaaagttgtagtgatgtaggctt
ttcatagacctctttggatctacattgattccattcttgaccatctcaca
agtgggaagctatgtgttgtgatatgtatattcatatatgaatgtaatta
catttagtgtaaacagaggccataaatttatagaagaatggagatagcta
tataggagggtttggatggaggaataaaaagggagaattgttttaattat
gttaaggtttcttcaataaaataaaattataatatgtactatatcatttt
gagacatttacaaaaattatggataataactttcaaaatatgatttttat
ttctatatatatgtttatccacagagatcagaagagtttaataacctgga
gctggagttataggcatatagaacccaaaagaactatggtttttagtata
agaactccacaaagtcaagtcatctgcattccaaagtgaatgtagtggca
cagaaagggtattttaccttatttgagaggctaatgaaacttgatagcat
gtgaacaaagaagagtcagttttttcttacaagagtgtctcttggtaggg
ccaggttcgttccaaaatggtcccagatgccatccaaatatgggcctatt
agactgagtaggaatacaggaaaaaaaaactgagagagaaaaaaaggaaa
aatgaatgaatgggaggaggaaaattctgtggggataaatcctaccagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87008786_87009913
seq2: B6Ng01-246B04.b_44_1181

seq1  GAATTCTTCCACACAACAACGAGAAAATTTGTAATCTTTCTAGTAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCACACAACAACGAGAAAATTTGTAATCTTTCTAGTAATGTA  50

seq1  TCACTAATTTTCCCTCAATTATAACAAAATTGATTTATGTAGACTGTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATTTTCCCTCAATTATAACAAAATTGATTTATGTAGACTGTTAC  100

seq1  TTTGAAATTTAAAAGTTACTTTGTCAGTGATCATATTTATGCAAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTTAAAAGTTACTTTGTCAGTGATCATATTTATGCAAAATATT  150

seq1  CTGAAATAATTAAACACATAAACACAACTTCTCTACAATAAATTTTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAATTAAACACATAAACACAACTTCTCTACAATAAATTTTGAAA  200

seq1  CAATAGCTATACCTGTTTCTATAGATTATATAATACCAAGTATACCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCTATACCTGTTTCTATAGATTATATAATACCAAGTATACCTGCA  250

seq1  ATTATGAGACAGAGCAGTTAGAATGTTAAGGCCAATTTGGATTATAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAGACAGAGCAGTTAGAATGTTAAGGCCAATTTGGATTATAAAGG  300

seq1  CCAGGGTGAGAAATTCAACGAAATCTTATCAAAACCTCACAAGAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTGAGAAATTCAACGAAATCTTATCAAAACCTCACAAGAAAAAAA  350

seq1  ATGAAAACAATCATATGTGGAAAACAATTTCTTCTGAAGAAAGAAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACAATCATATGTGGAAAACAATTTCTTCTGAAGAAAGAAACATG  400

seq1  ATTCAGGCTCACTGAAGTAAATAATGTAAGATAGGTATTAAAACCAGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGCTCACTGAAGTAAATAATGTAAGATAGGTATTAAAACCAGGGT  450

seq1  AGTAAATTAGATCAGCATCAGTATATTCTCACTGATTTTTCTTATTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTAGATCAGCATCAGTATATTCTCACTGATTTTTCTTATTAAAG  500

seq1  TAGACAAAAATAGAAAACATTCGCATAATTGTTATTTTCTTTATAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAAAAATAGAAAACATTCGCATAATTGTTATTTTCTTTATAGAAAT  550

seq1  AGCCTTTACCTAATTGAATTCAATCCTAACACTTAAATTCATGGCAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTACCTAATTGAATTCAATCCTAACACTTAAATTCATGGCAATAT  600

seq1  TTAATTTTAGGATTGTGTTTAAAATACTATAAATAATTAGAAGTACCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTAGGATTGTGTTTAAAATACTATAAATAATTAGAAGTACCTAC  650

seq1  TATGATACATAAACGAATTCTCAAAGGCATGGTTTACTGACACCATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATACATAAACGAATTCTCAAAGGCATGGTTTACTGACACCATTTTA  700

seq1  ATCACTTTGAATAGAGAAGAAATAGTTTCTTTATTGAAAGTTAATTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTTGAATAGAGAAGAAATAGTTTCTTTATTGAAAGTTAATTAAAG  750

seq1  AATAATATATTTACAGAGACTTGTATTTATTTATCAGAGAATGCTAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATATTTACAGAGACTTGTATTTATTTATCAGAGAATGCTAAATC  800

seq1  TGCCTGGTAACTGAGATAACTTGTAATTAAAAGATAAATTAGCATTTATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTAACTGAGATAACTTGTAATTAAAAGATAAATTAGCATTTATA  850

seq1  TTTAATTACAAAGAAATCTATACCTCATTTAGCATTTAATTAAAACTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTACAAAGAAATCTATACCTCATTTAGCATTTAATTAAAACTTGT  900

seq1  TTAAACAACCTAGCTGCTCAGTGAATTTTCAAATTTACATAAAATTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAACCTAGCTGCTCAGTGAATTTTCAAATTTACATAAAATTACAT  950

seq1  AATAAATAGCATTTTAATGTTTATTAATTTAGTAATTTTGACAATTTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAGCATTTTAATGTTTATTAATTTAGTAATTTTGACAATTTTAT  1000

seq1  TATGAGTCTAACTATCCTCTAGCAAGTTAGGTTTTCAT----TTATTATA  1046
      ||||||||||||||||||||||||||||| ||||||||    ||||||||
seq2  TATGAGTCTAACTATCCTCTAGCAAGTTAAGTTTTCATTTTATTATTATA  1050

seq1  TATTTTAAAATAACTGTAATATTC-TTTTTGTCCTCATGCCTTTTTCT-C  1094
      | ||| |||||||||||||||||| |||||||| |||||| ||||||| |
seq2  TTTTTAAAAATAACTGTAATATTCTTTTTTGTCTTCATGCATTTTTCTCC  1100

seq1  ACATCTTAG-AACA--TATATTTTTTA-CTGAAAATCC  1128
      ||||||||| ||||   |||||||||| ||||||||||
seq2  ACATCTTAGAAACAATAATATTTTTTACCTGAAAATCC  1138


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