BAC Information

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BAC

Clone NameB6Ng01-246P16
Chromosome13 (Build37)
Map Location 43,451,321 - 43,588,687
singlet/doubletdoublet
Overlap geneSirt5, Nol7, Ranbp9
Upstream geneHn1-ps4, Phactr1, Tbc1d7, Gfod1
Downstream geneLOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06, EG637868, EG667157
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246P16.bB6Ng01-246P16.g
ACCGA055442GA055443
length1,1461,131
definitionB6Ng01-246P16.b B6Ng01-246P16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,451,321 - 43,452,429)(43,587,571 - 43,588,687)
sequence
gaattcaagcagggcaggaagcaggagctgatgcagaggccatggaggga
tgttctttactggcttgcctcccctggctttctcagcttgctctcttata
gaacccaagactaccagcccagggatggcaccacccacactgagtcctcc
cacccttaatcactaattgagaaaatgccttacagctggatctcatggag
gcatttcctcaagggaggctcctttcgctgtgataactccagcgtgtgtc
aagttgacacacaaaaccagccagtgcacccctccacctctgtcaccctt
gaggtagtcatgtagcctggtggccaaattataggtttaaacccctctct
ccatctgagggcatgttcagcaagtgctggaattcctcttcatgcaaatg
gagcactcccagcatctcggcaccagccaagaatgcacccttgacccaga
aacccctacccactccccaataaaagagagccatttttctgaaaactgtc
cctgaaaaagctatttctcctggcactcctgctgccctagatcctggtcc
ccatcagccctgcttcatgccattccttcaagtccaacagccaagacacc
ctgcgggcagacgcagaaccaggctggcagtctatgccaccactgctgac
ataatttcttttggtcttacataggccaactagcttggggaacacagctc
acagtgtgggagaaacaagagaggcacagcttcaacaaagtggcaggtga
agcccacctctgaagagtattctccgacctctacatttgtgcctgcacac
acacacacacacacacacacacacacacacacacacacactaataataaa
taaaacttaaatttacaaagcaaatgttcagtgccggtccagttggtttc
tcctggatatctgtgtgtgcttgactcgcagccatccgacttcatccata
tggcacagtgggttatccctgcctgtcctaacagggtctgtgctctctgg
aaaataaccagagatcgaaaaggagtcttagcagcggttggttcggtgtc
agaaggccctggactacaagtgttgacggtgcagcccagtcagggaccga
gcgatttctcactgaaatctgggagcttaaggaggtgggggctgca
gaattcactcactctcgttacagtgcttgtctggagtatttgcatttgca
atgcttgtttgagaggaagccttcgcctcattgttagagcttcagcagtt
attaaataggagagcacagcctccagcaaagcaagccgtcacgggtctgc
actgcagcaaggagaagaggcgtacttgtgcagcatacttagaaaacaat
aagcacatgtgacttgcacctactgagtcagtacaggactgaggcaagcc
accgaagcacagacaaacctgtatacggccagcagaattgaacaaggcat
ctgtccagacctcagaaccaaacggagtcagggcatagagggtgggcata
gccacgctgacctagtttgctccctgtgaataaacagaatgaccaaaagc
cagacggggaaggagagggtatatcgggcttgtacttctccttacagttc
atcactgagggggaggtccaagggggaacccgaaggcaggaactgaagca
gagaccacagaagaatgctgcttcctggctccctcgtcagctgagatttc
ttagacagatgcttgcctttcttgaaggtccaggctgacaagcctaagca
acaggcctaaggcccacagggacctgggccctccgacatcaactagaaat
ccataaaatgccccgtaggtgtgcccacgggcctacatcatttggcaaat
tcttcaagtgagattctctcatgtcaggtgtgtcaagttgaccaacaaga
ttagccatcacacaaagctatgggcttgggctcctttttaaacctggcat
ttaaaagctggtcactgtatgaaaagactgtgagcatatttgctgactgt
acctccctgatatgagttgtaagactcaggaagttcctactatgttcagt
aacatttgtgtctcttttttaaaaattctcctttttacttctcttctcag
attattttatccgagcactgtacctcattggagatgaaatttaaaaagta
gtccacaggatcttgagaaatgttggtaggagagccatgtaccactttga
agctctttgatgctccggagccagacctgtcctgaagccttctggagtgc
tggtttgccaatgactctcctttagcccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_43451321_43452429
seq2: B6Ng01-246P16.b_68_1193

seq1  GCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCT  50

seq1  CCCCTGGCTTTCTCAGCTTGCTCTCTTATAGAACCCAAGACTACCAGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGCTTTCTCAGCTTGCTCTCTTATAGAACCCAAGACTACCAGCCC  100

seq1  AGGGATGGCACCACCCACACTGAGTCCTCCCACCCTTAATCACTAATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGGCACCACCCACACTGAGTCCTCCCACCCTTAATCACTAATTGA  150

seq1  GAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAAGGGAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAAGGGAGGCT  200

seq1  CCTTTCGCTGTGATAACTCCAGCGTGTGTCAAGTTGACACACAAAACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCGCTGTGATAACTCCAGCGTGTGTCAAGTTGACACACAAAACCAG  250

seq1  CCAGTGCACCCCTCCACCTCTGTCACCCTTGAGGTAGTCATGTAGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCACCCCTCCACCTCTGTCACCCTTGAGGTAGTCATGTAGCCTGG  300

seq1  TGGCCAAATTATAGGTTTAAACCCCTCTCTCCATCTGAGGGCATGTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAATTATAGGTTTAAACCCCTCTCTCCATCTGAGGGCATGTTCAG  350

seq1  CAAGTGCTGGAATTCCTCTTCATGCAAATGGAGCACTCCCAGCATCTCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGAATTCCTCTTCATGCAAATGGAGCACTCCCAGCATCTCGG  400

seq1  CACCAGCCAAGAATGCACCCTTGACCCAGAAACCCCTACCCACTCCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGCCAAGAATGCACCCTTGACCCAGAAACCCCTACCCACTCCCCAA  450

seq1  TAAAAGAGAGCCATTTTTCTGAAAACTGTCCCTGAAAAAGCTATTTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGAGCCATTTTTCTGAAAACTGTCCCTGAAAAAGCTATTTCTCC  500

seq1  TGGCACTCCTGCTGCCCTAGATCCTGGTCCCCATCAGCCCTGCTTCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTCCTGCTGCCCTAGATCCTGGTCCCCATCAGCCCTGCTTCATGC  550

seq1  CATTCCTTCAAGTCCAACAGCCAAGACACCCTGCGGGCAGACGCAGAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTCAAGTCCAACAGCCAAGACACCCTGCGGGCAGACGCAGAACC  600

seq1  AGGCTGGCAGTCTATGCCACCACTGCTGACATAATTTCTTTTGGTCTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCAGTCTATGCCACCACTGCTGACATAATTTCTTTTGGTCTTAC  650

seq1  ATAGGCCAACTAGCTTGGGGAACACAGCTCACAGTGTGGGAGAAACAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGCCAACTAGCTTGGGGAACACAGCTCACAGTGTGGGAGAAACAAGA  700

seq1  GAGGCACAGCTTCAACAAAGTGGCAGGTGAAGCCCACCTCTGAAGAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACAGCTTCAACAAAGTGGCAGGTGAAGCCCACCTCTGAAGAGTAT  750

seq1  TCTCCGACCTCTACATTTGTGCCTGCACACACACACACACACACACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGACCTCTACATTTGTGCCTGCACACACACACACACACACACACAC  800

seq1  ACACACACACACACACACACTAATAATAAATAAAACTT-AATTTACAAAG  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACACACACACACACACACACTAATAATAAATAAAACTTAAATTTACAAAG  850

seq1  CAAATGTTCAGTGCCGGTCCAGTTGGTTTCTCCTGGATATCTGTGTGTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTCAGTGCCGGTCCAGTTGGTTTCTCCTGGATATCTGTGTGTGC  900

seq1  TTGACTCGCAGCCATCCGAC-TCATCCATATGGCACAGTGGGTTATCCCT  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGACTCGCAGCCATCCGACTTCATCCATATGGCACAGTGGGTTATCCCT  950

seq1  GCCTGTCCT-ACA-GGTCTGTGCTCTCTGGGAAATAACCAGAGATCG-AA  995
      ||||||||| ||| |||||||||||||||| |||||||||||||||| ||
seq2  GCCTGTCCTAACAGGGTCTGTGCTCTCTGGAAAATAACCAGAGATCGAAA  1000

seq1  AGGAG-CCTAGCAGC-GTTGG-TCGGTG-CAGAAAGGCCT-GACTACAAG  1040
      ||||| | ||||||| ||||| |||||| ||||| | ||| |||||||||
seq2  AGGAGTCTTAGCAGCGGTTGGTTCGGTGTCAGAAGGCCCTGGACTACAAG  1050

seq1  TGTGGACGGTGCAG-CCAGTCAGG--ACGAGCGA-TTCTCACTG-AATCT  1085
      ||| |||||||||| |||||||||   ||||||| ||||||||| |||||
seq2  TGTTGACGGTGCAGCCCAGTCAGGGACCGAGCGATTTCTCACTGAAATCT  1100

seq1  -GGAGCTTAAGGAAGT-GGGGCTGCA  1109
       |||||||||||| || |||||||||
seq2  GGGAGCTTAAGGAGGTGGGGGCTGCA  1126

seq1: chr13_43587571_43588687
seq2: B6Ng01-246P16.g_69_1199 (reverse)

seq1  TGTGTGGCTAA---GGAGTCATTGGC-AACCAGCACTCCCAGAAGCCTTC  46
      |||| ||||||    ||||||||||| |||||||||| ||||||| ||||
seq2  TGTG-GGCTAAAGGAGAGTCATTGGCAAACCAGCACT-CCAGAAGGCTTC  48

seq1  A-GACAGGTCCTGCT-CGGGGCA-CCAAGGGCTCCAAAGTGGTACATGCC  93
      | ||||||||  ||| ||| ||| | ||| ||| |||||||||||||| |
seq2  AGGACAGGTCTGGCTCCGGAGCATCAAAGAGCTTCAAAGTGGTACATGGC  98

seq1  TCCTCCTTCCAACATTTCTCAAGATCCTGTGG-CTACTTTTT-AATTTCA  141
      | ||||| |||||||||||||||||||||||| ||||||||| |||||||
seq2  T-CTCCTACCAACATTTCTCAAGATCCTGTGGACTACTTTTTAAATTTCA  147

seq1  TCT-CAATGA-GTACAGTTGCTC-GATAAA--TATCTGAG-AGAGAAGT-  184
      ||| |||||| |||||| ||||| ||||||   ||||||| |||||||| 
seq2  TCTCCAATGAGGTACAG-TGCTCGGATAAAATAATCTGAGAAGAGAAGTA  196

seq1  AAAAGGAGA--TTTTTAAAAAGAGACACAAATGTTACTGAACATAGTAGG  232
      |||||||||  |||| ||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAATTTTTAAAAAAGAGACACAAATGTTACTGAACATAGTAGG  246

seq1  AACTTCCTGAGTCTTACAACTCATATCAGGGAGGTACAGTCAGCAAATAT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTGAGTCTTACAACTCATATCAGGGAGGTACAGTCAGCAAATAT  296

seq1  GCTCACAGTCTTTTCATACAGTGACCAGCTTTTAAATGCCAGGTTTAAAA  332
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAGTCTTTTCATACAGTGACCAGCTTTTAAATGCCAGGTTTAAAA  346

seq1  AGGAGCCCAAGCCCATAGCTTTGTGTGATGGCTAATCTTGTTGGTCAACT  382
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCCAAGCCCATAGCTTTGTGTGATGGCTAATCTTGTTGGTCAACT  396

seq1  TGACACACCTGACATGAGAGAATCTCACTTGAAGAATTTGCCAAATGATG  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACCTGACATGAGAGAATCTCACTTGAAGAATTTGCCAAATGATG  446

seq1  TAGGCCCGTGGGCACACCTACGGGGCATTTTATGGATTTCTAGTTGATGT  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCGTGGGCACACCTACGGGGCATTTTATGGATTTCTAGTTGATGT  496

seq1  CGGAGGGCCCAGGTCCCTGTGGGCCTTAGGCCTGTTGCTTAGGCTTGTCA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGGCCCAGGTCCCTGTGGGCCTTAGGCCTGTTGCTTAGGCTTGTCA  546

seq1  GCCTGGACCTTCAAGAAAGGCAAGCATCTGTCTAAGAAATCTCAGCTGAC  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGACCTTCAAGAAAGGCAAGCATCTGTCTAAGAAATCTCAGCTGAC  596

seq1  GAGGGAGCCAGGAAGCAGCATTCTTCTGTGGTCTCTGCTTCAGTTCCTGC  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGCCAGGAAGCAGCATTCTTCTGTGGTCTCTGCTTCAGTTCCTGC  646

seq1  CTTCGGGTTCCCCCTTGGACCTCCCCCTCAGTGATGAACTGTAAGGAGAA  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGGTTCCCCCTTGGACCTCCCCCTCAGTGATGAACTGTAAGGAGAA  696

seq1  GTACAAGCCCGATATACCCTCTCCTTCCCCGTCTGGCTTTTGGTCATTCT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGCCCGATATACCCTCTCCTTCCCCGTCTGGCTTTTGGTCATTCT  746

seq1  GTTTATTCACAGGGAGCAAACTAGGTCAGCGTGGCTATGCCCACCCTCTA  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCACAGGGAGCAAACTAGGTCAGCGTGGCTATGCCCACCCTCTA  796

seq1  TGCCCTGACTCCGTTTGGTTCTGAGGTCTGGACAGATGCCTTGTTCAATT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGACTCCGTTTGGTTCTGAGGTCTGGACAGATGCCTTGTTCAATT  846

seq1  CTGCTGGCCGTATACAGGTTTGTCTGTGCTTCGGTGGCTTGCCTCAGTCC  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCCGTATACAGGTTTGTCTGTGCTTCGGTGGCTTGCCTCAGTCC  896

seq1  TGTACTGACTCAGTAGGTGCAAGTCACATGTGCTTATTGTTTTCTAAGTA  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGACTCAGTAGGTGCAAGTCACATGTGCTTATTGTTTTCTAAGTA  946

seq1  TGCTGCACAAGTACGCCTCTTCTCCTTGCTGCAGTGCAGACCCGTGACGG  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCACAAGTACGCCTCTTCTCCTTGCTGCAGTGCAGACCCGTGACGG  996

seq1  CTTGCTTTGCTGGAGGCTGTGCTCTCCTATTTAATAACTGCTGAAGCTCT  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTGCTGGAGGCTGTGCTCTCCTATTTAATAACTGCTGAAGCTCT  1046

seq1  AACAATGAGGCGAAGGCTTCCTCTCAAACAAGCATTGCAAATGCAAATAC  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGAGGCGAAGGCTTCCTCTCAAACAAGCATTGCAAATGCAAATAC  1096

seq1  TCCAGACAAGCACTGTAACGAGAGTGAGTGAATTC  1117
      |||||||||||||||||||||||||||||||||||
seq2  TCCAGACAAGCACTGTAACGAGAGTGAGTGAATTC  1131