BAC Information

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BAC

Clone NameB6Ng01-250D10
Chromosome13 (Build37)
Map Location 74,509,946 - 74,511,121
singlet/doubletsinglet
Overlap geneZfp72
Upstream geneAytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19, Slc12a7, Nkd2, EG666360, Trip13, Brd9, Zdhhc11, LOC100042909, 2900041A09Rik, LOC621824, Cep72, Slc9a3, Exoc3, Ahrr, Pdcd6, Sdha, Ccdc127, AI595366
Downstream geneLOC666670, LOC634386, LOC100042547, LOC666683, LOC547136, BC012278, LOC434490, Arts1, Cast, LOC622204, EG544954, Pcsk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250D10.bB6Ng01-250D10.g
ACCGA057823GA057824
length1,2451,172
definitionB6Ng01-250D10.b B6Ng01-250D10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatattggagagaaaccgtatgaacgtaaccaatgtggtaaagcc
tttgcaagtgacaatcatctccaaatacataaaagaacaaatactggaga
gaaaccttatgaatgtaatcaatgtggtaaagccttttcacaagggagta
ctctccaatatcatattagaagacataatggagagaaaccctataaatgt
aatcagtgtggtaaagcctatggacatcacagtagtctgcaatatcataa
aagaacacatactggagagaaaccttatcaatgtaatcaatgtgataaag
cattttcacaacacagtagtcttgaatatcataaaataacacatactgga
gagaaaccttatgagtgtgatcaatgtggtaaagcctttgcatggcagtc
tagtctcaatatacataaaagaacacattctggagaaaaacctcatgagt
gtaatcaatgtggtaaagcctttgtacatcacaatagtctccaatgtcat
aaaagaacgcatactggagagaaaccttatcagtgtgatcagtgtggtaa
agcatttacacatcaaaataatctacagtgtcataaaagaacacatactg
gagagaaaccttatgaatgcaatcaatgtggtaaagcatttgcaagacac
agtcatctccaagtacatgaaagaacacattttagaaaaacaccttagaa
tgcaatcactgttgtaaagactttggatgtaagactaatctccaaagaca
taaaagaacatatactggacagaaaccttatgaatgtaatcaatgtggta
aagcctttgcaactcacagtcatctacaatgacataaaagaacacagagg
agagaaacctggttattgtttacatatggacataaaggagatacaagtat
gtatcaaattgacaagggatggattgtgattgctgctcttggttttcaat
ataagatctaaagtgggaaagcataggtccaggcatggtggtacatgccc
ttgaaccctagagatgagcatcaagcagatctctgagttcaagtccatcc
tgaaacagaagcaagttaaagtgaagaaattcttaagtcttaggcctggt
ggaatacagagcctggcagaatttcttgagttcaagttcaaatatattaa
agcagttcaggacacgccaagcttgagagtaggaatggaaaccgaaactg
ggtgataatgttaatagaagagaggcccacttttctccacgggac
gaattctttgatgctgggtaaggcttgaagaccagttaaaagctttgcca
cattctgggcatttatagggtttctcaccagtgtgaattctctgatgctt
atacaggtgagaagaacagttaaaagcctgaccacactgttcacatttgt
agggtttctctccagtgtgaattctttgatgtggggtaaggcttgaagaa
cagctaaaagctttgccacattgttcacatttgtagggtttctctcctgt
atgaactctctgatgttgaataaggagtgacttccgaacaaaggtcttgt
tacattctttatatttatagggttttgttcctgttgaataaatggtaagg
tattaataaaaattataatctttatatttgtaataattatcattaacata
gatatttttattccattacatttcatataaaaatttaccctcacatcaac
cagaaaatacaaacatatttctacagcccaaatcactatggcattattca
gaaagtaacacaggcagaaataacctaaacttccattgcactgaaacggt
gaagacaatatggaatatacaaataatattcaaccagtaagaggtaatca
tatattatctgccatgaggataattcttaaaggataaatgaaataaaaca
caaagatatattatatgacttgaattacttgaagattctatagtaataaa
acttgtggggctggagggatgtctcagtggttaagagtactgactgctct
tccagaggtcctgagttcaattcccagcaaccacacggtggctcacaacc
atctctaatgggatctgatgtctcttctggtgtgtctgaagacagctaca
gtgtacttatcatatacataaaataaaatcattttaaacaaacttgtaaa
acttacagtagaatggtaaatggaatagtttacatggagaacaaaagtat
acaatttctttcataaatatagttagtttcaaagaaaaattatttttcta
aaaatatagtgtatagatttgaatataattactgaataggtgtactcaaa
atactgatatacctttaaattaatttttatacaattaaaatagtttaatt
tatcaaatttattgtaataatttatctgtagattcacagaaggtttccag
tagccaatgtatccataatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_74509946_74511121
seq2: B6Ng01-250D10.g_70_1241

seq1  GAATTCTTTGATGCTGGGTAAGGCTTGAAGACCAGTTAAAAGCTTTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGATGCTGGGTAAGGCTTGAAGACCAGTTAAAAGCTTTGCCA  50

seq1  CATTCTGGGCATTTATAGGGTTTCTCACCAGTGTGAATTCTCTGATGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGGGCATTTATAGGGTTTCTCACCAGTGTGAATTCTCTGATGCTT  100

seq1  ATACAGGTGAGAAGAACAGTTAAAAGCCTGACCACACTGTTCACATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGTGAGAAGAACAGTTAAAAGCCTGACCACACTGTTCACATTTGT  150

seq1  AGGGTTTCTCTCCAGTGTGAATTCTTTGATGTGGGGTAAGGCTTGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTCCAGTGTGAATTCTTTGATGTGGGGTAAGGCTTGAAGAA  200

seq1  CAGCTAAAAGCTTTGCCACATTGTTCACATTTGTAGGGTTTCTCTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAAAGCTTTGCCACATTGTTCACATTTGTAGGGTTTCTCTCCTGT  250

seq1  ATGAACTCTCTGATGTTGAATAAGGAGTGACTTCCGAACAAAGGTCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTCTCTGATGTTGAATAAGGAGTGACTTCCGAACAAAGGTCTTGT  300

seq1  TACATTCTTTATATTTATAGGGTTTTGTTCCTGTTGAATAAATGGTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTTTATATTTATAGGGTTTTGTTCCTGTTGAATAAATGGTAAGG  350

seq1  TATTAATAAAAATTATAATCTTTATATTTGTAATAATTATCATTAACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATAAAAATTATAATCTTTATATTTGTAATAATTATCATTAACATA  400

seq1  GATATTTTTATTCCATTACATTTCATATAAAAATTTACCCTCACATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTTTATTCCATTACATTTCATATAAAAATTTACCCTCACATCAAC  450

seq1  CAGAAAATACAAACATATTTCTACAGCCCAAATCACTATGGCATTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATACAAACATATTTCTACAGCCCAAATCACTATGGCATTATTCA  500

seq1  GAAAGTAACACAGGCAGAAATAACCTAAACTTCCATTGCACTGAAACGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTAACACAGGCAGAAATAACCTAAACTTCCATTGCACTGAAACGGT  550

seq1  GAAGACAATATGGAATATACAAATAATATTCAACCAGTAAGAGGTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAATATGGAATATACAAATAATATTCAACCAGTAAGAGGTAATCA  600

seq1  TATATTATCTGCCATGAGGATAATTCTTAAAGGATAAATGAAATAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTATCTGCCATGAGGATAATTCTTAAAGGATAAATGAAATAAAACA  650

seq1  CAAAGATATATTATATGACTTGAATTACTTGAAGATTCTATAGTAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATATATTATATGACTTGAATTACTTGAAGATTCTATAGTAATAAA  700

seq1  ACTTGTGGGGCTGGAGGGATGTCTCAGTGGTTAAGAGTACTGACTGCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGGGGCTGGAGGGATGTCTCAGTGGTTAAGAGTACTGACTGCTCT  750

seq1  TCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACACGGTGGCTCACAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACACGGTGGCTCACAACC  800

seq1  ATCTCTAATGGGATCTGATGTCTCTTCTGGTGTGTCTGAAGACAGCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAATGGGATCTGATGTCTCTTCTGGTGTGTCTGAAGACAGCTACA  850

seq1  GTGTACTTATCATATACATAAAATAAAATCATTTTAAACAAACTTGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTTATCATATACATAAAATAAAATCATTTTAAACAAACTTGTAAA  900

seq1  ACTTACAGTAGAATGGTAAATGGAATAGTTTACATGGAG-ACAAAAGTAT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACTTACAGTAGAATGGTAAATGGAATAGTTTACATGGAGAACAAAAGTAT  950

seq1  ACAATTTCTTTCATAAATATAGTTAGTTTCAAAAGAAAAATTA-TTTTCT  998
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  ACAATTTCTTTCATAAATATAGTTAGTTTC-AAAGAAAAATTATTTTTCT  999

seq1  AAAAATATAGTGTATAAGAATTTGAATATAATTACTGAATA-GTGTACTC  1047
      ||||||||||||||||   |||||||||||||||||||||| ||||||||
seq2  AAAAATATAGTGTATA--GATTTGAATATAATTACTGAATAGGTGTACTC  1047

seq1  AAAATACTTAATATACCTTTATA-TAATTTTTATACAATTAAAATAAGTT  1096
      ||||||| | ||||||||||| | ||||||||||||||||||||| ||||
seq2  AAAATAC-TGATATACCTTTAAATTAATTTTTATACAATTAAAAT-AGTT  1095

seq1  TAAATTTATCAAATTTATTGTTAATAAATTTATCTGTAGA-TCACAGAAG  1145
      | |||||||||||||||||| |||| |||||||||||||| |||||||||
seq2  T-AATTTATCAAATTTATTG-TAAT-AATTTATCTGTAGATTCACAGAAG  1142

seq1  --TTTCAGTAAAGGCAATGTATTCATAAATATT  1176
        || ||||  || |||||||| ||| ||||||
seq2  GTTTCCAGT--AGCCAATGTATCCAT-AATATT  1172