BAC Information

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BAC

Clone NameB6Ng01-250P10
Chromosome13 (Build37)
Map Location 22,188,682 - 22,189,082
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340, Zfp192, Olfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17
Downstream geneV1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480, V1ri6, LOC665726, V1rh21, V1ri3, V1rh4, V1rh3, V1rh1, LOC665749, V1ri4, V1ri7, V1rh11, OTTMUSG00000000494, V1rh8, V1rh7, LOC382740, LOC432735, V1rh9, OTTMUSG00000000514, V1rh10, V1rh20, V1rh18, V1rh6, V1rh5, V1ri2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250P10.bB6Ng01-250P10.g
ACCGA058359GA058360
length1,105395
definitionB6Ng01-250P10.b B6Ng01-250P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtttgatatcgaattccttacagaatgaaataaaa
tttttactacaataggatggcctagacaagaatctgtcttaataagttta
ggcaaacccatggcattaaatgcttgtaggcaatgatcaatcacgttttt
agaagcctctcctgtatgcagagaagggatcttgacggtgtattgaagtt
aaatgtaccacaggtctcaaataagggtactgattgtgcaacatataaac
tgtcagtaaagatattaaaagcctcatgtacagactgaaagacctttagt
actgctgttaatttggctaattgagccgaaaggccaggagtctctatgat
aacttgttgattattaataagctatctagctcgccctttagaggagctat
cagtaaaaatcaatagagcattatataaaggctgtaaggaagtcatttta
ggaaatttcacatcatgtacatttaaaaattttattaacctatcttgggg
gtagtggctgtctatagtttcgttaaaacctatttgtgcaagcaaccaat
ctgtactatgttgttttagctaagtgtcctgacttacgctgtaaggctaa
acaatgatatctggctcttttctgaaatacgttaatgcctgccttcttcc
agtgatcatcatctgtgccactgctttgtgatatggcaagatattacatt
taggagaaatctttgagtgcatccacattataggaaatttttgctatagc
agttccataggcacatgagtcgtattaaaaattaacagatgcagcggcaa
ggagtaatctatataagtgacaaattgctctttaatagctttttttacta
gctgtaaggccagcaatccttttgaggttagggatctaggggaagtgggg
gatgtgctctggaattaactttggtaaggtaatttagaatataggaatct
ctcaccattggaactgaaatattagaccagtctaagattgaattagaaag
actggtcccccctgaagaaaagacaaaaaatcatttatgacttccataaa
tgactaattttaccaaagctaggacaaatacaacctctggatgatactat
tgcac
aaatagagcaggaacctggagccagaactgatattgaggctatggaggga
tgccttaattggcttgctcatcatagctgttcagcctgttttgtatagaa
cccaggaccatctccctagggatggcaccacctacaatgggctgggccct
cccccatcaatcagtatttgagaaaatgccttacagttgaactacatgga
ggtattttctcaattcaggtccccttctttcagatcactctatctcatgt
caagttgaactagcctgcacatggccattggctaccataaagcagtgact
atatgccccttctacctgtgggtgattggctactagtccttaaggacaaa
ggaaccagaggtcttcatgctgggtgtgggtgtgggtgtgggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_22188682_22189082
seq2: B6Ng01-250P10.g_67_467

seq1  GAATTCAAATAGAGCAGGAACCTGGAGCCAGAACTGATATTGAGGCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAGAGCAGGAACCTGGAGCCAGAACTGATATTGAGGCTATG  50

seq1  GAGGGATGCCTTAATTGGCTTGCTCATCATAGCTGTTCAGCCTGTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATGCCTTAATTGGCTTGCTCATCATAGCTGTTCAGCCTGTTTTGT  100

seq1  ATAGAACCCAGGACCATCTCCCTAGGGATGGCACCACCTACAATGGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACCCAGGACCATCTCCCTAGGGATGGCACCACCTACAATGGGCTG  150

seq1  GGCCCTCCCCCATCAATCAGTATTTGAGAAAATGCCTTACAGTTGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCCCCCATCAATCAGTATTTGAGAAAATGCCTTACAGTTGAACTA  200

seq1  CATGGAGGTATTTTCTCAATTCAGGTCCCCTTCTTTCAGATCACTCTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGTATTTTCTCAATTCAGGTCCCCTTCTTTCAGATCACTCTATC  250

seq1  TCATGTCAAGTTGAACTAGCCTGCACATGGCCATTGGCTACCATAAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCAAGTTGAACTAGCCTGCACATGGCCATTGGCTACCATAAAGCA  300

seq1  GTGACTATATGCCCCTTCTACCTGTGGGTGATTGGCTACTAGTCCTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTATATGCCCCTTCTACCTGTGGGTGATTGGCTACTAGTCCTTAAG  350

seq1  GACAAAGGAACCAGAGGTCTTCATGCTGGGTGTGGGTGTGGGTGTGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGAACCAGAGGTCTTCATGCTGGGTGTGGGTGTGGGTGTGGGTG  400

seq1  T  401
      |
seq2  T  401