BAC Information

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BAC

Clone NameB6Ng01-253H17
Chromosome13 (Build37)
Map Location 86,962,906 - 86,963,933
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253H17.bB6Ng01-253H17.g
ACCGA060200GA060201
length1,1771,020
definitionB6Ng01-253H17.b B6Ng01-253H17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcatttgcattttcaagggctaaagactcaattattacttttc
ttgctgctgtttctgaggttagcctttgtaaaaagacagggaagttttct
tgtggaccttgtaatacttgaataaatggttcaagtctttttcttgattc
tgtaactttttcccagttctttaaggctgacaatcaacacaatgccagag
tttcttcatcatacctcctacctcagcaaagtaaacttcaccaaccagtt
ggtctgttgaaatctctctaccattggctctattttatcatgctatattc
cacaacttgtctctccaccatttgaaccattgtaaatttgcatcaggttc
tagtattgctcttgccatatccttccagtcctggggggttattctatttt
taatagtgcaagaaatcaggatttgttttagaaaccataaattcaggaat
ctctctgctttagtaagcacaaacaataaacttagctggtttgaaacttg
ccatatgatcctcactcccaaaacccctttatctcattccttaatatttc
tctgaaaaggtgcctcataatgcaacaaagtggttatctttgttatttga
ggtctatgaaacaactcacaattcatactgcttccttatgttttgtatag
ttgagacattatacattgttgaacttgtatttacagagttgtttcccaca
tcgttaagggctggcctaaaaattacagtgttcatgtcaccatttttgtt
gaggggtaccagacatacctctgtcttccagatgtgtgctatatctaatt
accatggagtcattaaccttggcagggagaacactccatgataaccttgc
cagggagaccatttcccaaattaggaacataaactatgcaatgtacatca
ttatacaagcaaaccccatgcccacatcaaccatcactacctgtggacac
cataccttcttgactctgctctgtgagtagaactcggtcaaacatccctt
atgcagcagatttgcaacattgttcagctacatcacagacataatatatg
catctgacacagaacagacaactgactcacatgctatgggtgcattgtta
tattactcacgaggtgaattccaatctctggccaattagccttatgttat
taaaatattttataaattccaaaaaat

gaattcctttgaagtttcctttgttggattttatggaaacctatcatatc
ctataaatattttactaactttatatttgagaaattattttcatttttcc
agaagtaatatagcaatgcctatagaaaggataggtaaatctatgtattt
gatttattcttatatgtcataaagtattactgtgtactttataagatacc
acacttgtttgaagaggatgactttatattaatgattaacataactgact
cctatgaatgagtcctgtaagataaaaagtatatatcattttaaattgaa
tttaatattaatatatgaaatttatttgtgatgaaattcttgttctttga
tgacaatacctgaaatgaaaaaaaaattactaaattatttagctatgaat
acggttaaaattatttagttatgaatacggttaaaattaaaacaaactct
tatgcctaaatttctaataatgtaagttgtgataatttcaccattactat
aaaataattggaaatgaacatatataatttataatttcttaattcattta
ttataaataaaattacccccatgtatataactgattagtcaacacatata
taaaagcatttaaaagcattattttgcttgtgacatatttaatgtgatgc
tcagatcataatgaaatacagtttattatcatttcttctcttctaagcat
gaggttcgcagaccataaattaaagtcaaggaaaccaccacttaggagag
tgggaataaaatcaaacaggtgttaagtgggtttattttgttttaaaata
ttctttgctgagtaatttagaaaaacagatggcaaactgtactcacgaag
aactggaatttttattattagagattgctgttttgaagtaaattgctttt
cttactcaaatggcaaaagattgtgtgatatctgtgaggtataacatacc
ataccatgcacaatagattcacctttcatttactcagtatactactgaga
ctttatagatacaatttggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86962906_86963933
seq2: B6Ng01-253H17.g_65_1084

seq1  GAATTCCTTTGAAGTTTCCTTTGTTGGATTTTATGGAAACCTATCATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTGAAGTTTCCTTTGTTGGATTTTATGGAAACCTATCATATC  50

seq1  CTATAAATATTTTACTAACTTTATATTTGAGAAATTATTTTCATTTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAATATTTTACTAACTTTATATTTGAGAAATTATTTTCATTTTTCC  100

seq1  AGAAGTAATATAGCAATGCCTATAGAAAGGATAGGTAAATCTATGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAATATAGCAATGCCTATAGAAAGGATAGGTAAATCTATGTATTT  150

seq1  GATTTATTCTTATATGTCATAAAGTATTACTGTGTACTTTATAAGATACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTCTTATATGTCATAAAGTATTACTGTGTACTTTATAAGATACC  200

seq1  ACACTTGTTTGAAGAGGATGACTTTATATTAATGATTAACATAACTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTGTTTGAAGAGGATGACTTTATATTAATGATTAACATAACTGACT  250

seq1  CCTATGAATGAGTCCTGTAAGATAAAAAGTATATATCATTTTAAATTGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGAATGAGTCCTGTAAGATAAAAAGTATATATCATTTTAAATTGAA  300

seq1  TTTAATATTAATATATGAAATTTATTTGTGATGAAATTCTTGTTCTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTAATATATGAAATTTATTTGTGATGAAATTCTTGTTCTTTGA  350

seq1  TGACAATACCTGAAATGAAAAAAAAATTACTAAATTATTTAGCTATGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATACCTGAAATGAAAAAAAAATTACTAAATTATTTAGCTATGAAT  400

seq1  ACGGTTAAAATTATTTAGTTATGAATACGGTTAAAATTAAAACAAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTAAAATTATTTAGTTATGAATACGGTTAAAATTAAAACAAACTCT  450

seq1  TATGCCTAAATTTCTAATAATGTAAGTTGTGATAATTTCACCATTACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTAAATTTCTAATAATGTAAGTTGTGATAATTTCACCATTACTAT  500

seq1  AAAATAATTGGAAATGAACATATATAATTTATAATTTCTTAATTCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATTGGAAATGAACATATATAATTTATAATTTCTTAATTCATTTA  550

seq1  TTATAAATAAAATTACCCCCATGTATATAACTGATTAGTCAACACATATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAAAATTACCCCCATGTATATAACTGATTAGTCAACACATATA  600

seq1  TAAAAGCATTTAAAAGCATTATTTTGCTTGTGACATATTTAATGTGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCATTTAAAAGCATTATTTTGCTTGTGACATATTTAATGTGATGC  650

seq1  TCAGATCATAATGAAATACAGTTTATTATCATTTCTTCTCTTCTAAGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCATAATGAAATACAGTTTATTATCATTTCTTCTCTTCTAAGCAT  700

seq1  GAGGTTCGCAGACCATAAATTAAAGTCAAGGAAACCACCACTTAGGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCGCAGACCATAAATTAAAGTCAAGGAAACCACCACTTAGGAGAG  750

seq1  TGGGAATAAAATCAAACAGGTGTTAAGTGGGTTTATTTTGTTTTAAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATAAAATCAAACAGGTGTTAAGTGGGTTTATTTTGTTTTAAAATA  800

seq1  TTCTTTGCTGAGTAATTTAGAAAAACAGATGGCAAACTGTACTCACGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGCTGAGTAATTTAGAAAAACAGATGGCAAACTGTACTCACGAAG  850

seq1  AACTGGAATTTTTATTATTAGAGATTGCTGTTTTGAAGTAAATTGCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAATTTTTATTATTAGAGATTGCTGTTTTGAAGTAAATTGCTTTT  900

seq1  CTTACTCAAATGGCAAAAGATTGTGTGATATCTGTGAGGTATAACATACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTCAAATGGCAAAAGATTGTGTGATATCTGTGAGGTATAACATACC  950

seq1  ATACCATGCACAAATAGATTCACCTTTTCATTTACTCAGTTAATACTTAC  1000
      ||||||||||| |||||||||||| |||||||||||||||  |||| |||
seq2  ATACCATGCAC-AATAGATTCACC-TTTCATTTACTCAGT--ATAC-TAC  995

seq1  TGAGAACTTTATAGATACCAAATTTGGT  1028
      |||| |||||||||||||  ||||||||
seq2  TGAG-ACTTTATAGATAC--AATTTGGT  1020


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