BAC Information

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BAC

Clone NameB6Ng01-254M09
Chromosome13 (Build37)
Map Location 33,517,584 - 33,518,496
singlet/doubletsinglet
Overlap genenone
Upstream geneWrnip1, Serpinb1a, Serpinb1-ps1, Serpinb1c, Serpinb6b, Serpinb9, Serpinb9b, Serpinb1b, LOC628301, Serpinb9c, Serpinb9d, Serpinb9e, Serpinb9f, OTTMUSG00000000724
Downstream geneSerpinb9g, LOC100041370, EG619715, LOC382743, OTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254M09.b
ACCGA061153
length994
definitionB6Ng01-254M09.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagctgtggcatggctttactgaatgacaatcatgatattaaa
tgtggtgagactttgtgaaagaatcattctctctgtgtcaatgtgcatta
tcaagaaagtagagagaacatgtctataaaatgaaagaatggtaaatcta
cagacacagagagaagattggttgttacacaaacagggaggaaagaatag
agtcactgattgacggttatacaatttgtttgaaaggcgattaaagaaga
ttatagcatgtcattgacaggcaatgaagtttctacttatatattattat
tattgttaatattattagttttttattatacaaataaatgcaataaaatg
ctttgaaaaaccaaactaggacagaggggctttgctttggaagataggag
caatcagccgacacccagatgcagctagacaccccagaatatctgacaca
tcaggaaaaaaggatcacaggatcacaggatcacaggataacaggataac
aggataaaaggctatcaggaaggacaggatccagtcagagacagtaagag
aagttaaatccagagataatcagatggcaagggacaagataaggaacata
aggatcagaaatcaatgctagttggtagcatcaaaacctagctctcccac
cacagcaagccctagatacctccacacacctgaaaagcaagaattatatc
taaaatcccagatcatgaaaacgatagaggacattaagtaagacataata
acttccttaaataaatagagaataacacaggtaaacaagtagaagccctt
aaaaaggaaacacatacatctcttaaagaaatacagggaaaacacaatca
agcaggtgaaggacttgaaaaaaactatgcaggatataaaatagaaatag
atacataaaagaaaacaaaagaggcagtagatttctgagtttgaggccag
cctggtctaaagagtgagttccagacgggctgcaagagaaacct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_33517584_33518496
seq2: B6Ng01-254M09.b_47_959

seq1  GAATTCTTAGCTGTGGCATGGCTTTACTGAATGACAATCATGATATTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTGTGGCATGGCTTTACTGAATGACAATCATGATATTAAA  50

seq1  TGTGGTGAGACTTTGTGAAAGAATCATTCTCTCTGTGTCAATGTGCATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGAGACTTTGTGAAAGAATCATTCTCTCTGTGTCAATGTGCATTA  100

seq1  TCAAGAAAGTAGAGAGAACATGTCTATAAAATGAAAGAATGGTAAATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAGTAGAGAGAACATGTCTATAAAATGAAAGAATGGTAAATCTA  150

seq1  CAGACACAGAGAGAAGATTGGTTGTTACACAAACAGGGAGGAAAGAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACAGAGAGAAGATTGGTTGTTACACAAACAGGGAGGAAAGAATAG  200

seq1  AGTCACTGATTGACGGTTATACAATTTGTTTGAAAGGCGATTAAAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGATTGACGGTTATACAATTTGTTTGAAAGGCGATTAAAGAAGA  250

seq1  TTATAGCATGTCATTGACAGGCAATGAAGTTTCTACTTATATATTATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGCATGTCATTGACAGGCAATGAAGTTTCTACTTATATATTATTAT  300

seq1  TATTGTTAATATTATTAGTTTTTTATTATACAAATAAATGCAATAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAATATTATTAGTTTTTTATTATACAAATAAATGCAATAAAATG  350

seq1  CTTTGAAAAACCAAACTAGGACAGAGGGGCTTTGCTTTGGAAGATAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAAACCAAACTAGGACAGAGGGGCTTTGCTTTGGAAGATAGGAG  400

seq1  CAATCAGCCGACACCCAGATGCAGCTAGACACCCCAGAATATCTGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGCCGACACCCAGATGCAGCTAGACACCCCAGAATATCTGACACA  450

seq1  TCAGGAAAAAAGGATCACAGGATCACAGGATCACAGGATAACAGGATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAAAAGGATCACAGGATCACAGGATCACAGGATAACAGGATAAC  500

seq1  AGGATAAAAGGCTATCAGGAAGGACAGGATCCAGTCAGAGACAGTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAAGGCTATCAGGAAGGACAGGATCCAGTCAGAGACAGTAAGAG  550

seq1  AAGTTAAATCCAGAGATAATCAGATGGCAAGGGACAAGATAAGGAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAATCCAGAGATAATCAGATGGCAAGGGACAAGATAAGGAACATA  600

seq1  AGGATCAGAAATCAATGCTAGTTGGTAGCATCAAAACCTAGCTCTCCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCAGAAATCAATGCTAGTTGGTAGCATCAAAACCTAGCTCTCCCAC  650

seq1  CACAGCAAGCCCTAGATACCTCCACACACCTGAAAAGCAAGAATTATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAAGCCCTAGATACCTCCACACACCTGAAAAGCAAGAATTATATC  700

seq1  TAAAATCCCAGATCATGAAAACGATAGAGGACATTAAGTAAGACATAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCCAGATCATGAAAACGATAGAGGACATTAAGTAAGACATAATA  750

seq1  ACTTCCTTAAATAAATAGAGAATAACACAGGTAAACAAGTAGAAGCCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTAAATAAATAGAGAATAACACAGGTAAACAAGTAGAAGCCCTT  800

seq1  AAAAAGGAAACACATACATCTCTTAAAGAAATACA-GGAAAACACAATCA  849
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAAAGGAAACACATACATCTCTTAAAGAAATACAGGGAAAACACAATCA  850

seq1  AGCAGGTGAAGGACTTGAAAAAAACTATGCAGGATATAAAAATAGAAATA  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCAGGTGAAGGACTTGAAAAAAACTATGCAGGATAT-AAAATAGAAATA  899

seq1  GATACATAAAAGAA  913
      ||||||||||||||
seq2  GATACATAAAAGAA  913