BAC Information

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BAC

Clone NameB6Ng01-256N23
Chromosome13 (Build37)
Map Location 114,699,348 - 114,882,971
singlet/doubletdoublet
Overlap geneArl15
Upstream geneSkiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074, LOC100040888, Snag1, Hspb3, EG632832, LOC622701, LOC100040927
Downstream geneA430090L17Rik, Ndufs4, LOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256N23.bB6Ng01-256N23.g
ACCGA062719GA062720
length1,130555
definitionB6Ng01-256N23.b B6Ng01-256N23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,881,837 - 114,882,971)(114,699,348 - 114,699,908)
sequence
gaattctcagttactacctccagcaccatgccaccatgctccctgccagg
gtgataacggactaagacctctcaactgtaagcaagccccagttaaatgt
tttgttttatgagagttaccatggtaactcttcacagcaatagaatactg
actaacacacaggtatgcacaaaaaaaaaaaaaaatggggaggagtcact
agtcatgaacatagtaataatggctcaaggactgccattgatctgagatc
acatgaccaagaatgatgcacactgcagaaatttacattggatttaagtt
tgctttagaaattttagtatcacaaaataattagaaacctaactaactct
aatggtctggtttttctgaggcattataagctgagatgacagtcagtttt
agtagatattaatgatgctaagatatttccaattaattctcccttttctg
tttgtgaaaaaaaatcttaacatttttagctggatcaagcatttcataaa
tcccagcttcaaattttgtgaataagtaaagattattctttttccagggc
cacaactgaacgggtcactttgaaacaagctacacagtcctaaggttaac
cagcaaacatttccattcctctcaaatgcatcctgttaggggattattaa
tggaacagaatcagactttaaaaagacatgactgcaaataaaagttcaag
ctgtgaatcaaattttaacagcaaagaacataacctgataactccaaagc
tactgaggcaaaacacacaactcataaaatcgtagctttgacattcacca
agctatgcaaaagatctgcttttaaaggatgtcgtcttcaacttttaaat
ggaaagcaggggctctttctatgctgtgagccatagccgaatttccgaag
ctatatttttaaatacacacagtttcgaacacacagcagaaactctttct
acataaaggaataaagcagaccctgacttctaaaagctcacaaatgaaac
aaaacaagtttgggaaaccaaacacatctgggtattaaaaactattgggc
tgagtagaagctacggtttgtaacccactacacgagctctctgacactcc
ctgatagctaacactgaatagagaaccgtt
tttttctccccgctgctgtggtgccctctgattattcagtagtagcccct
ggcaaaacattgggacaccattggtttgctttatgaagacaaacatttgg
gaaatgttaaatacttaggaattatgttaaatctgaaaggtgcaaatatt
taaaatagaatgtgttaatagcgggtagtcttttactatggtgtacttgg
ggttttctgtttgtttatttgttttttaatcttttgaattcccatcgact
tcagtaaaataaatagtgggttctctttctgtaggtctttgaaagtcacc
attcagtcagacatctggctttctgactgacatatgtgtcatgaggccac
atgtgtcagggcgagagattatccaggtattcagggctgtttgtgatctt
cctctccatttttgttggatagaatatctatgtttgcatacacatgggca
taccagtacacatgcccttgtatttcgatatggaggccagaggtaagctt
acactgtcttttattgctccttccattcaaaacattttaatagaagtgtg
tgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_114881837_114882971
seq2: B6Ng01-256N23.b_48_1177 (reverse)

seq1  AACGTTTCTCTA-TCAGTGTTAAGCTATCAGGGAAGTGTCAAGAGAGCTC  49
      |||| ||||||| |||||||| ||||||||||| |||||| |||||||||
seq2  AACGGTTCTCTATTCAGTGTT-AGCTATCAGGG-AGTGTC-AGAGAGCTC  47

seq1  GTTGTTAGTGGGTTACAAACCGTTAGCTTCCTTAACTCAGCCCAATTAGT  99
      ||   ||||||||||||||||| |||||||    ||||||||||| ||||
seq2  GT--GTAGTGGGTTACAAACCG-TAGCTTC---TACTCAGCCCAA-TAGT  90

seq1  TTTTAAATACCAGATGTGTTTGGTTT-CCAAACTTGTTTTGTTTCATTTG  148
      ||||||   ||||||||||||||||| |||||||||||||||||||||||
seq2  TTTTAATACCCAGATGTGTTTGGTTTCCCAAACTTGTTTTGTTTCATTTG  140

seq1  TGAGCTTTTAGAAGTCAGGGTCTGCTTTATT-CTTTATGTAGAAAGAGTT  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGAGCTTTTAGAAGTCAGGGTCTGCTTTATTCCTTTATGTAGAAAGAGTT  190

seq1  TCTGCTGTGTGTTCG-AACTGTGTGTATTTAAAAATATAGCTTCGG-AAT  245
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  TCTGCTGTGTGTTCGAAACTGTGTGTATTTAAAAATATAGCTTCGGAAAT  240

seq1  TCGGCTATGGCTCACAGCATAGAAAGAGCCCCTGCTTTCCATTTAAAAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCTATGGCTCACAGCATAGAAAGAGCCCCTGCTTTCCATTTAAAAGT  290

seq1  TGAAGACGACATCCTTTAAAAGCAGATCTTTTGCATAGCTTGGTGAATGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACGACATCCTTTAAAAGCAGATCTTTTGCATAGCTTGGTGAATGT  340

seq1  CAAAGCTACGATTTTATGAGTTGTGTGTTTTGCCTCAGTAGCTTTGGAGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTACGATTTTATGAGTTGTGTGTTTTGCCTCAGTAGCTTTGGAGT  390

seq1  TATCAGGTTATGTTCTTTGCTGTTAAAATTTGATTCACAGCTTGAACTTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGTTATGTTCTTTGCTGTTAAAATTTGATTCACAGCTTGAACTTT  440

seq1  TATTTGCAGTCATGTCTTTTTAAAGTCTGATTCTGTTCCATTAATAATCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCAGTCATGTCTTTTTAAAGTCTGATTCTGTTCCATTAATAATCC  490

seq1  CCTAACAGGATGCATTTGAGAGGAATGGAAATGTTTGCTGGTTAACCTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACAGGATGCATTTGAGAGGAATGGAAATGTTTGCTGGTTAACCTTA  540

seq1  GGACTGTGTAGCTTGTTTCAAAGTGACCCGTTCAGTTGTGGCCCTGGAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTGTAGCTTGTTTCAAAGTGACCCGTTCAGTTGTGGCCCTGGAAA  590

seq1  AAGAATAATCTTTACTTATTCACAAAATTTGAAGCTGGGATTTATGAAAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAATCTTTACTTATTCACAAAATTTGAAGCTGGGATTTATGAAAT  640

seq1  GCTTGATCCAGCTAAAAATGTTAAGATTTTTTTTCACAAACAGAAAAGGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATCCAGCTAAAAATGTTAAGATTTTTTTTCACAAACAGAAAAGGG  690

seq1  AGAATTAATTGGAAATATCTTAGCATCATTAATATCTACTAAAACTGACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTAATTGGAAATATCTTAGCATCATTAATATCTACTAAAACTGACT  740

seq1  GTCATCTCAGCTTATAATGCCTCAGAAAAACCAGACCATTAGAGTTAGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTCAGCTTATAATGCCTCAGAAAAACCAGACCATTAGAGTTAGTT  790

seq1  AGGTTTCTAATTATTTTGTGATACTAAAATTTCTAAAGCAAACTTAAATC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTAATTATTTTGTGATACTAAAATTTCTAAAGCAAACTTAAATC  840

seq1  CAATGTAAATTTCTGCAGTGTGCATCATTCTTGGTCATGTGATCTCAGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAAATTTCTGCAGTGTGCATCATTCTTGGTCATGTGATCTCAGAT  890

seq1  CAATGGCAGTCCTTGAGCCATTATTACTATGTTCATGACTAGTGACTCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCAGTCCTTGAGCCATTATTACTATGTTCATGACTAGTGACTCCT  940

seq1  CCCCATTTTTTTTTTTTTTTGTGCATACCTGTGTGTTAGTCAGTATTCTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTTTTTTTTTTTTTGTGCATACCTGTGTGTTAGTCAGTATTCTA  990

seq1  TTGCTGTGAAGAGTTACCATGGTAACTCTCATAAAACAAAACATTTAACT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGAAGAGTTACCATGGTAACTCTCATAAAACAAAACATTTAACT  1040

seq1  GGGGCTTGCTTACAGTTGAGAGGTCTTAGTCCGTTATCACCCTGGCAGGG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTGCTTACAGTTGAGAGGTCTTAGTCCGTTATCACCCTGGCAGGG  1090

seq1  AGCATGGTGGCATGGTGCTGGAGGTAGTAACTGAGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGTGGCATGGTGCTGGAGGTAGTAACTGAGAATTC  1130

seq1: chr13_114699348_114699908
seq2: B6Ng01-256N23.g_69_629

seq1  GAATTCTTTTTCTCCCCGCTGCTGTGGTGCCCTCTGATTATTCAGTAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCTCCCCGCTGCTGTGGTGCCCTCTGATTATTCAGTAGTA  50

seq1  GCCCCTGGCAAAACATTGGGACACCATTGGTTTGCTTTATGAAGACAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGGCAAAACATTGGGACACCATTGGTTTGCTTTATGAAGACAAAC  100

seq1  ATTTGGGAAATGTTAAATACTTAGGAATTATGTTAAATCTGAAAGGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAAATGTTAAATACTTAGGAATTATGTTAAATCTGAAAGGTGCA  150

seq1  AATATTTAAAATAGAATGTGTTAATAGCGGGTAGTCTTTTACTATGGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAAATAGAATGTGTTAATAGCGGGTAGTCTTTTACTATGGTGT  200

seq1  ACTTGGGGTTTTCTGTTTGTTTATTTGTTTTTTAATCTTTTGAATTCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGGTTTTCTGTTTGTTTATTTGTTTTTTAATCTTTTGAATTCCCA  250

seq1  TCGACTTCAGTAAAATAAATAGTGGGTTCTCTTTCTGTAGGTCTTTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTTCAGTAAAATAAATAGTGGGTTCTCTTTCTGTAGGTCTTTGAAA  300

seq1  GTCACCATTCAGTCAGACATCTGGCTTTCTGACTGACATATGTGTCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATTCAGTCAGACATCTGGCTTTCTGACTGACATATGTGTCATGA  350

seq1  GGCCACATGTGTCAGGGCGAGAGATTATCCAGGTATTCAGGGCTGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACATGTGTCAGGGCGAGAGATTATCCAGGTATTCAGGGCTGTTTGT  400

seq1  GATCTTCCTCTCCATTTTTGTTGGATAGAATATCTATGTTTGCATACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCTCTCCATTTTTGTTGGATAGAATATCTATGTTTGCATACACA  450

seq1  TGGGCATACCAGTACACATGCCCTTGTATTTCGATATGGAGGCCAGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATACCAGTACACATGCCCTTGTATTTCGATATGGAGGCCAGAGGT  500

seq1  AAGCTTACACTGTCTTTTATTGCTCCTTCCATTCAAAACATTTTAATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTACACTGTCTTTTATTGCTCCTTCCATTCAAAACATTTTAATAGA  550

seq1  AGTGTGTGTGT  561
      |||||||||||
seq2  AGTGTGTGTGT  561