BAC Information

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BAC

Clone NameB6Ng01-260I10
Chromosome13 (Build37)
Map Location 119,728,068 - 119,728,993
singlet/doubletsinglet
Overlap genenone
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
Downstream geneLOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I10.b
ACCGA065427
length927
definitionB6Ng01-260I10.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgttcctagcctcttgattgctatgcatattttatttttgaga
atatatgtaggaataagaatgatgacgccattcatgtgttcgttcatctt
cttagatattgactgttactctccatggtgagaatttcaatgactctata
ttttgtttgaacttgatattactcttatttttattcattctcatcagtgt
gtggcaatagttcattcaccttttgggcacatttcttccatacataatga
tgttgaggccattttatatttgggtatatgcacatgggacatatgtgtag
cacagaccctctcacccgcacaaacatacatacatacacccgcacacaca
tacccacacacacacacacacacacacatatatatatatatacacacaca
cacatatacacaacacacaagtgttctgtcacatatttggatatatatat
atatatttttttttattttattattttgtaccctcctactttgtatttta
tggcaggctccaagtattgttgaggaaagctttgaaattgttctggactc
catccacaccctgaattcatgatcctactgagtagctgaaatcataaact
tgtgcccactaggttgggtgttagtattattttaataattagacatgata
tagctgtctcttatgacactaagccactgactggcaaactcagaagtgga
tgatcactcactcctatgtggatggaacacagggcccccaatggacgtgt
aatgagccagtaccctaggtggtgaagggtgggcttctcctctacgtgga
aaaggggcatctgggacaatgtcccccaaagattgtttatctcttagata
tgtagcacaagatgacctaaattggcatcatagggaagagatgccacctc
gggccttgcactattcatatccctcag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119728068_119728993
seq2: B6Ng01-260I10.b_42_968 (reverse)

seq1  CTGAGGGATATAAAGCTTGCAAGACC--AAGGGGCATCTCTTCCCAATGA  48
      ||||||||||| ||   |||||| ||  | | ||||||||||||| ||||
seq2  CTGAGGGATATGAATAGTGCAAGGCCCGAGGTGGCATCTCTTCCCTATGA  50

seq1  TGGCCGACTAGGTCATCTTCTGCTACATATGCGACTAGAGACACAAGCTC  98
      || |    ||||||||||| |||||||||| | |  ||| | |||| || 
seq2  TGCCAATTTAGGTCATCTTGTGCTACATAT-CTAAGAGATAAACAATCTT  99

seq1  TGGGGGTACTGGT--TAGTTCATATTGTTTTTCCACCTATAGGGTTGCAG  146
      ||||||   | ||   ||   ||     |||||||| || |||   | ||
seq2  TGGGGGACATTGTCCCAG---ATGCCCCTTTTCCACGTAGAGG--AGAAG  144

seq1  AC--CCCTTCAGCTCCTTGGGTACTTTCTC-TAGCTCCTCCATTGGGGGC  193
       |  ||||||| | ||| |||||||  ||| |  | | ||||||||||||
seq2  CCCACCCTTCACCACCTAGGGTACTGGCTCATTACACGTCCATTGGGGGC  194

seq1  CCTGTGTTCCATCCA-ATAGCTGACTGTGAGCATCCACTTCTGTGTTTGC  242
      ||||||||||||||| ||||  |   |||| |||||||||||| ||||||
seq2  CCTGTGTTCCATCCACATAGGAGTGAGTGATCATCCACTTCTGAGTTTGC  244

seq1  CAGGCACTGGCTTAGTCTCACAAGAGACAGCTATATCATGTCTAATTATT  292
      ||| || ||||||||| ||| |||||||||||||||||||||||||||||
seq2  CAGTCAGTGGCTTAGTGTCATAAGAGACAGCTATATCATGTCTAATTATT  294

seq1  AAAATAATACTAACACCCAACCTAGTGGGCACAAGTTTATGATTTCAGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATACTAACACCCAACCTAGTGGGCACAAGTTTATGATTTCAGCT  344

seq1  ACTCAGTAGGATCATGAATTCAAGGTCTGCCTGGAGTCCAGAACAATTTC  392
      |||||||||||||||||||||| ||| ||  |||||||||||||||||||
seq2  ACTCAGTAGGATCATGAATTCAGGGTGTGGATGGAGTCCAGAACAATTTC  394

seq1  AAAGCTTTCCTCAACAATACTTGGAGCCTGCCATAAAATACAAAGTAGGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTCCTCAACAATACTTGGAGCCTGCCATAAAATACAAAGTAGGA  444

seq1  GGGTACAAAATAATAAAATAAAAAAAAATATATATATATATATCCAAATA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACAAAATAATAAAATAAAAAAAAATATATATATATATATCCAAATA  494

seq1  TGTGACAGAACACTTGTGTGTTGTGTATATGTGTGTGTGTGTATATATAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGAACACTTGTGTGTTGTGTATATGTGTGTGTGTGTATATATAT  544

seq1  ATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTAT  592
      ||||||||||||||||||||||||||||| ||||||||||| | ||||||
seq2  ATATATGTGTGTGTGTGTGTGTGTGTGTGGGTATGTGTGTGCGGGTGTAT  594

seq1  GTATGTATGTTTGTGTGTGTCTGTGTGTCTGTGTTACACATATGTACCAT  642
      ||||||||||||||| | ||  | | ||||||| ||||||||||| ||||
seq2  GTATGTATGTTTGTGCGGGTGAGAGGGTCTGTGCTACACATATGTCCCAT  644

seq1  GTGCATATACACAAATATAAAATGACCTCAACATCATTATGTATGGAAGA  692
      |||||||||| ||||||||||||| |||||||||||||||||||||||||
seq2  GTGCATATACCCAAATATAAAATGGCCTCAACATCATTATGTATGGAAGA  694

seq1  AATGTGCCCAAAACTTGAATGAACTATTGCCACACACTGATGAGAATGAA  742
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  AATGTGCCCAAAAGGTGAATGAACTATTGCCACACACTGATGAGAATGAA  744

seq1  TAAAACTAAGAGTAATATCAAGTTCAAACAAAATATAGAGTCATTGAAAT  792
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAGAGTAATATCAAGTTCAAACAAAATATAGAGTCATTGAAAT  794

seq1  TCTCACCATGGAGACTAACAGTCAATATCTAAGAAGATGAACGAACACAT  842
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCTCACCATGGAGAGTAACAGTCAATATCTAAGAAGATGAACGAACACAT  844

seq1  GAATTGTGTCATCATTCTTATTCCTACATATATTCTCAAAAATAAAATAT  892
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCGTCATCATTCTTATTCCTACATATATTCTCAAAAATAAAATAT  894

seq1  GCATATGTAATCAAGAGGCTCTGAACAAGAATTC  926
      ||||| | ||||||||||||  ||||||||||||
seq2  GCATA-GCAATCAAGAGGCTAGGAACAAGAATTC  927